Experiment: m.b. Chlorite 0.08 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08605 and CA264_08610 are separated by 225 nucleotides CA264_08610 and CA264_08615 overlap by 4 nucleotides CA264_08615 and CA264_08620 are separated by 79 nucleotides
CA264_08605: CA264_08605 - S1/P1 Nuclease, at 1,998,129 to 1,998,896
_08605
CA264_08610: CA264_08610 - NCS2 family permease, at 1,999,122 to 2,000,426
_08610
CA264_08615: CA264_08615 - hypothetical protein, at 2,000,423 to 2,000,608
_08615
CA264_08620: CA264_08620 - hypothetical protein, at 2,000,688 to 2,001,353
_08620
Position (kb)
1999
2000
2001 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1998.123 kb on - strand at 1998.139 kb on + strand at 1998.345 kb on - strand, within CA264_08605 at 1998.345 kb on - strand, within CA264_08605 at 1998.552 kb on + strand, within CA264_08605 at 1998.594 kb on + strand, within CA264_08605 at 1998.644 kb on + strand, within CA264_08605 at 1998.771 kb on + strand, within CA264_08605 at 1998.771 kb on + strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.772 kb on - strand, within CA264_08605 at 1998.822 kb on + strand at 1998.823 kb on - strand at 1998.915 kb on + strand at 1998.916 kb on - strand at 1999.020 kb on - strand at 1999.102 kb on - strand at 1999.132 kb on - strand at 1999.209 kb on + strand at 1999.209 kb on + strand at 1999.210 kb on - strand at 1999.214 kb on + strand at 1999.215 kb on - strand at 1999.220 kb on - strand at 1999.229 kb on + strand at 1999.308 kb on - strand, within CA264_08610 at 1999.377 kb on + strand, within CA264_08610 at 1999.378 kb on - strand, within CA264_08610 at 1999.485 kb on - strand, within CA264_08610 at 1999.599 kb on - strand, within CA264_08610 at 1999.634 kb on + strand, within CA264_08610 at 1999.635 kb on - strand, within CA264_08610 at 1999.635 kb on - strand, within CA264_08610 at 1999.658 kb on - strand, within CA264_08610 at 2000.066 kb on - strand, within CA264_08610 at 2000.066 kb on - strand, within CA264_08610 at 2000.091 kb on - strand, within CA264_08610 at 2000.202 kb on - strand, within CA264_08610 at 2000.225 kb on - strand, within CA264_08610 at 2000.234 kb on + strand, within CA264_08610 at 2000.285 kb on + strand, within CA264_08610 at 2000.286 kb on - strand, within CA264_08610 at 2000.290 kb on - strand, within CA264_08610 at 2000.309 kb on + strand at 2000.424 kb on + strand at 2000.424 kb on + strand at 2000.424 kb on + strand at 2000.424 kb on + strand at 2000.425 kb on - strand at 2000.524 kb on - strand, within CA264_08615 at 2000.524 kb on - strand, within CA264_08615 at 2000.524 kb on - strand, within CA264_08615 at 2000.565 kb on + strand, within CA264_08615 at 2000.565 kb on + strand, within CA264_08615 at 2000.565 kb on + strand, within CA264_08615 at 2000.566 kb on - strand, within CA264_08615 at 2000.615 kb on + strand at 2000.616 kb on - strand at 2000.687 kb on + strand at 2000.738 kb on - strand at 2000.751 kb on - strand at 2000.798 kb on + strand, within CA264_08620 at 2000.842 kb on + strand, within CA264_08620 at 2000.894 kb on - strand, within CA264_08620 at 2001.096 kb on + strand, within CA264_08620 at 2001.097 kb on - strand, within CA264_08620 at 2001.157 kb on + strand, within CA264_08620 at 2001.158 kb on - strand, within CA264_08620 at 2001.179 kb on - strand, within CA264_08620 at 2001.235 kb on - strand, within CA264_08620 at 2001.235 kb on - strand, within CA264_08620 at 2001.352 kb on - strand at 2001.366 kb on - strand at 2001.391 kb on - strand at 2001.423 kb on + strand at 2001.423 kb on + strand at 2001.423 kb on + strand at 2001.424 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chlorite 0.08 mM remove 1,998,123 - -0.3 1,998,139 + +0.2 1,998,345 - CA264_08605 0.28 -0.0 1,998,345 - CA264_08605 0.28 +0.2 1,998,552 + CA264_08605 0.55 -0.4 1,998,594 + CA264_08605 0.61 -0.2 1,998,644 + CA264_08605 0.67 -1.0 1,998,771 + CA264_08605 0.84 -0.1 1,998,771 + CA264_08605 0.84 -0.1 1,998,772 - CA264_08605 0.84 -0.0 1,998,772 - CA264_08605 0.84 +0.0 1,998,772 - CA264_08605 0.84 +0.2 1,998,772 - CA264_08605 0.84 +0.0 1,998,822 + -0.7 1,998,823 - +1.1 1,998,915 + -1.2 1,998,916 - -0.5 1,999,020 - -0.6 1,999,102 - -1.5 1,999,132 - -0.1 1,999,209 + -1.0 1,999,209 + -0.7 1,999,210 - -0.4 1,999,214 + +2.8 1,999,215 - -1.6 1,999,220 - -0.7 1,999,229 + -1.4 1,999,308 - CA264_08610 0.14 -1.2 1,999,377 + CA264_08610 0.20 -0.0 1,999,378 - CA264_08610 0.20 +0.1 1,999,485 - CA264_08610 0.28 +0.1 1,999,599 - CA264_08610 0.37 +0.5 1,999,634 + CA264_08610 0.39 +1.2 1,999,635 - CA264_08610 0.39 -0.4 1,999,635 - CA264_08610 0.39 +0.8 1,999,658 - CA264_08610 0.41 -0.6 2,000,066 - CA264_08610 0.72 -0.7 2,000,066 - CA264_08610 0.72 +0.8 2,000,091 - CA264_08610 0.74 -1.8 2,000,202 - CA264_08610 0.83 +0.3 2,000,225 - CA264_08610 0.85 -1.1 2,000,234 + CA264_08610 0.85 +0.1 2,000,285 + CA264_08610 0.89 -0.9 2,000,286 - CA264_08610 0.89 -0.0 2,000,290 - CA264_08610 0.90 -0.1 2,000,309 + -0.5 2,000,424 + -1.1 2,000,424 + +0.4 2,000,424 + -0.8 2,000,424 + +0.4 2,000,425 - -0.2 2,000,524 - CA264_08615 0.54 +0.3 2,000,524 - CA264_08615 0.54 -0.5 2,000,524 - CA264_08615 0.54 -1.1 2,000,565 + CA264_08615 0.76 +1.7 2,000,565 + CA264_08615 0.76 -1.6 2,000,565 + CA264_08615 0.76 +0.1 2,000,566 - CA264_08615 0.77 +0.5 2,000,615 + +0.3 2,000,616 - +0.4 2,000,687 + -0.8 2,000,738 - +0.8 2,000,751 - +0.7 2,000,798 + CA264_08620 0.17 +0.4 2,000,842 + CA264_08620 0.23 +0.2 2,000,894 - CA264_08620 0.31 +0.2 2,001,096 + CA264_08620 0.61 -0.6 2,001,097 - CA264_08620 0.61 +0.8 2,001,157 + CA264_08620 0.70 -0.0 2,001,158 - CA264_08620 0.71 -1.6 2,001,179 - CA264_08620 0.74 -0.3 2,001,235 - CA264_08620 0.82 -0.8 2,001,235 - CA264_08620 0.82 +0.3 2,001,352 - +0.1 2,001,366 - -0.2 2,001,391 - -0.9 2,001,423 + -0.1 2,001,423 + +0.9 2,001,423 + -0.0 2,001,424 - -1.3
Or see this region's nucleotide sequence