Experiment: sodium fluoride 12.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4986 and PfGW456L13_4987 are separated by 191 nucleotides PfGW456L13_4987 and PfGW456L13_4988 are separated by 122 nucleotides PfGW456L13_4988 and PfGW456L13_4989 are separated by 40 nucleotides PfGW456L13_4989 and PfGW456L13_4990 overlap by 27 nucleotides
PfGW456L13_4986 - 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34), at 5,564,814 to 5,565,917
_4986
PfGW456L13_4987 - Glutathione peroxidase family protein, at 5,566,109 to 5,566,591
_4987
PfGW456L13_4988 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8), at 5,566,714 to 5,567,199
_4988
PfGW456L13_4989 - hypothetical protein, at 5,567,240 to 5,567,560
_4989
PfGW456L13_4990 - Phosphate acetyltransferase (EC 2.3.1.8), at 5,567,534 to 5,569,654
_4990
Position (kb) 5566
5567 Strain fitness (log2 ratio) -1
0
1
2 at 5565.226 kb on + strand, within PfGW456L13_4986 at 5565.226 kb on + strand, within PfGW456L13_4986 at 5565.226 kb on + strand, within PfGW456L13_4986 at 5565.226 kb on + strand, within PfGW456L13_4986 at 5565.227 kb on - strand, within PfGW456L13_4986 at 5565.227 kb on - strand, within PfGW456L13_4986 at 5565.227 kb on - strand, within PfGW456L13_4986 at 5565.688 kb on + strand, within PfGW456L13_4986 at 5565.787 kb on + strand, within PfGW456L13_4986 at 5565.788 kb on - strand, within PfGW456L13_4986 at 5565.790 kb on + strand, within PfGW456L13_4986 at 5565.791 kb on - strand, within PfGW456L13_4986 at 5565.791 kb on - strand, within PfGW456L13_4986 at 5565.791 kb on - strand, within PfGW456L13_4986 at 5565.809 kb on + strand at 5565.810 kb on - strand at 5565.810 kb on - strand at 5565.810 kb on - strand at 5565.953 kb on - strand at 5565.955 kb on + strand at 5565.971 kb on + strand at 5565.984 kb on + strand at 5565.984 kb on + strand at 5565.985 kb on - strand at 5566.001 kb on + strand at 5566.001 kb on + strand at 5566.002 kb on - strand at 5566.068 kb on + strand at 5566.068 kb on + strand at 5566.068 kb on + strand at 5566.068 kb on + strand at 5566.068 kb on + strand at 5566.068 kb on + strand at 5566.069 kb on - strand at 5566.095 kb on + strand at 5566.095 kb on + strand at 5566.095 kb on + strand at 5566.095 kb on + strand at 5566.096 kb on - strand at 5566.096 kb on - strand at 5566.096 kb on - strand at 5566.098 kb on - strand at 5566.163 kb on - strand, within PfGW456L13_4987 at 5566.232 kb on - strand, within PfGW456L13_4987 at 5566.272 kb on + strand, within PfGW456L13_4987 at 5566.272 kb on + strand, within PfGW456L13_4987 at 5566.272 kb on + strand, within PfGW456L13_4987 at 5566.273 kb on - strand, within PfGW456L13_4987 at 5566.335 kb on + strand, within PfGW456L13_4987 at 5566.335 kb on + strand, within PfGW456L13_4987 at 5566.335 kb on + strand, within PfGW456L13_4987 at 5566.336 kb on - strand, within PfGW456L13_4987 at 5566.336 kb on - strand, within PfGW456L13_4987 at 5566.336 kb on - strand, within PfGW456L13_4987 at 5566.447 kb on - strand, within PfGW456L13_4987 at 5566.467 kb on + strand, within PfGW456L13_4987 at 5566.468 kb on - strand, within PfGW456L13_4987 at 5566.541 kb on + strand, within PfGW456L13_4987 at 5566.541 kb on + strand, within PfGW456L13_4987 at 5566.541 kb on + strand, within PfGW456L13_4987 at 5566.542 kb on - strand, within PfGW456L13_4987 at 5566.542 kb on - strand, within PfGW456L13_4987 at 5566.542 kb on - strand, within PfGW456L13_4987 at 5566.570 kb on + strand at 5566.597 kb on - strand at 5566.693 kb on + strand at 5566.693 kb on + strand at 5566.694 kb on - strand at 5566.694 kb on - strand at 5566.988 kb on + strand, within PfGW456L13_4988 at 5566.989 kb on - strand, within PfGW456L13_4988 at 5566.998 kb on - strand, within PfGW456L13_4988 at 5567.099 kb on + strand, within PfGW456L13_4988 at 5567.100 kb on - strand, within PfGW456L13_4988 at 5567.100 kb on - strand, within PfGW456L13_4988 at 5567.160 kb on + strand at 5567.160 kb on + strand at 5567.160 kb on + strand at 5567.160 kb on + strand at 5567.161 kb on - strand at 5567.161 kb on - strand at 5567.162 kb on + strand at 5567.162 kb on + strand at 5567.162 kb on + strand at 5567.162 kb on + strand at 5567.163 kb on - strand at 5567.163 kb on - strand at 5567.163 kb on - strand at 5567.163 kb on - strand at 5567.163 kb on - strand at 5567.163 kb on - strand at 5567.182 kb on - strand at 5567.182 kb on - strand at 5567.431 kb on - strand, within PfGW456L13_4989 at 5567.474 kb on - strand, within PfGW456L13_4989 at 5567.514 kb on + strand, within PfGW456L13_4989 at 5567.514 kb on + strand, within PfGW456L13_4989 at 5567.514 kb on + strand, within PfGW456L13_4989 at 5567.514 kb on + strand, within PfGW456L13_4989 at 5567.514 kb on + strand, within PfGW456L13_4989 at 5567.515 kb on - strand, within PfGW456L13_4989 at 5567.515 kb on - strand, within PfGW456L13_4989 at 5567.515 kb on - strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.516 kb on + strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand at 5567.517 kb on - strand at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989 at 5567.517 kb on - strand, within PfGW456L13_4989
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 12.5 mM remove 5,565,226 + PfGW456L13_4986 0.37 +2.4 5,565,226 + PfGW456L13_4986 0.37 -0.5 5,565,226 + PfGW456L13_4986 0.37 -0.1 5,565,226 + PfGW456L13_4986 0.37 -0.4 5,565,227 - PfGW456L13_4986 0.37 +1.0 5,565,227 - PfGW456L13_4986 0.37 +0.7 5,565,227 - PfGW456L13_4986 0.37 +0.8 5,565,688 + PfGW456L13_4986 0.79 +1.0 5,565,787 + PfGW456L13_4986 0.88 -0.0 5,565,788 - PfGW456L13_4986 0.88 +0.1 5,565,790 + PfGW456L13_4986 0.88 -0.4 5,565,791 - PfGW456L13_4986 0.88 -0.2 5,565,791 - PfGW456L13_4986 0.88 +0.2 5,565,791 - PfGW456L13_4986 0.88 +0.3 5,565,809 + -0.6 5,565,810 - +0.7 5,565,810 - +0.1 5,565,810 - -0.4 5,565,953 - -0.3 5,565,955 + +0.2 5,565,971 + +0.4 5,565,984 + -0.1 5,565,984 + -0.3 5,565,985 - +0.3 5,566,001 + -0.4 5,566,001 + +0.4 5,566,002 - -0.0 5,566,068 + -1.0 5,566,068 + +1.0 5,566,068 + +0.6 5,566,068 + +1.1 5,566,068 + +0.1 5,566,068 + -0.2 5,566,069 - -0.2 5,566,095 + -0.7 5,566,095 + -0.4 5,566,095 + +0.4 5,566,095 + +0.3 5,566,096 - -0.2 5,566,096 - +0.2 5,566,096 - +0.0 5,566,098 - +0.5 5,566,163 - PfGW456L13_4987 0.11 +0.3 5,566,232 - PfGW456L13_4987 0.25 +0.6 5,566,272 + PfGW456L13_4987 0.34 +0.9 5,566,272 + PfGW456L13_4987 0.34 +0.6 5,566,272 + PfGW456L13_4987 0.34 +0.0 5,566,273 - PfGW456L13_4987 0.34 +0.0 5,566,335 + PfGW456L13_4987 0.47 -0.4 5,566,335 + PfGW456L13_4987 0.47 +0.2 5,566,335 + PfGW456L13_4987 0.47 -0.2 5,566,336 - PfGW456L13_4987 0.47 +1.7 5,566,336 - PfGW456L13_4987 0.47 +0.6 5,566,336 - PfGW456L13_4987 0.47 +0.7 5,566,447 - PfGW456L13_4987 0.70 +0.4 5,566,467 + PfGW456L13_4987 0.74 -0.7 5,566,468 - PfGW456L13_4987 0.74 -0.6 5,566,541 + PfGW456L13_4987 0.89 +0.6 5,566,541 + PfGW456L13_4987 0.89 +0.5 5,566,541 + PfGW456L13_4987 0.89 +0.1 5,566,542 - PfGW456L13_4987 0.90 -0.4 5,566,542 - PfGW456L13_4987 0.90 +0.5 5,566,542 - PfGW456L13_4987 0.90 -0.3 5,566,570 + +0.6 5,566,597 - -0.2 5,566,693 + +0.5 5,566,693 + +0.7 5,566,694 - +0.1 5,566,694 - +0.2 5,566,988 + PfGW456L13_4988 0.56 -0.9 5,566,989 - PfGW456L13_4988 0.57 -0.4 5,566,998 - PfGW456L13_4988 0.58 +0.3 5,567,099 + PfGW456L13_4988 0.79 +0.0 5,567,100 - PfGW456L13_4988 0.79 +0.7 5,567,100 - PfGW456L13_4988 0.79 -0.6 5,567,160 + -0.0 5,567,160 + +0.1 5,567,160 + +0.4 5,567,160 + -0.1 5,567,161 - +0.3 5,567,161 - +0.1 5,567,162 + -1.4 5,567,162 + -0.4 5,567,162 + +1.8 5,567,162 + -1.4 5,567,163 - +0.4 5,567,163 - -0.8 5,567,163 - +0.6 5,567,163 - -0.9 5,567,163 - -0.8 5,567,163 - +0.6 5,567,182 - +0.5 5,567,182 - +0.2 5,567,431 - PfGW456L13_4989 0.60 +0.0 5,567,474 - PfGW456L13_4989 0.73 +0.0 5,567,514 + PfGW456L13_4989 0.85 +0.1 5,567,514 + PfGW456L13_4989 0.85 +1.4 5,567,514 + PfGW456L13_4989 0.85 +0.1 5,567,514 + PfGW456L13_4989 0.85 +0.2 5,567,514 + PfGW456L13_4989 0.85 +0.8 5,567,515 - PfGW456L13_4989 0.86 +0.1 5,567,515 - PfGW456L13_4989 0.86 +0.3 5,567,515 - PfGW456L13_4989 0.86 +0.4 5,567,516 + PfGW456L13_4989 0.86 -0.5 5,567,516 + PfGW456L13_4989 0.86 +0.4 5,567,516 + PfGW456L13_4989 0.86 -0.1 5,567,516 + PfGW456L13_4989 0.86 +0.2 5,567,516 + PfGW456L13_4989 0.86 -0.4 5,567,516 + PfGW456L13_4989 0.86 +0.1 5,567,516 + PfGW456L13_4989 0.86 -0.7 5,567,516 + PfGW456L13_4989 0.86 +0.1 5,567,516 + PfGW456L13_4989 0.86 -1.3 5,567,516 + PfGW456L13_4989 0.86 -0.3 5,567,516 + PfGW456L13_4989 0.86 -0.3 5,567,516 + PfGW456L13_4989 0.86 +0.2 5,567,516 + PfGW456L13_4989 0.86 +0.1 5,567,516 + PfGW456L13_4989 0.86 +0.2 5,567,516 + PfGW456L13_4989 0.86 -0.4 5,567,516 + PfGW456L13_4989 0.86 +1.1 5,567,516 + PfGW456L13_4989 0.86 -0.6 5,567,516 + PfGW456L13_4989 0.86 +0.6 5,567,516 + PfGW456L13_4989 0.86 -0.0 5,567,516 + PfGW456L13_4989 0.86 -0.6 5,567,516 + PfGW456L13_4989 0.86 -0.7 5,567,516 + PfGW456L13_4989 0.86 -0.8 5,567,516 + PfGW456L13_4989 0.86 +0.5 5,567,516 + PfGW456L13_4989 0.86 +0.5 5,567,516 + PfGW456L13_4989 0.86 -0.0 5,567,516 + PfGW456L13_4989 0.86 +0.3 5,567,516 + PfGW456L13_4989 0.86 -0.4 5,567,516 + PfGW456L13_4989 0.86 -0.5 5,567,517 - PfGW456L13_4989 0.86 +0.7 5,567,517 - PfGW456L13_4989 0.86 +0.2 5,567,517 - PfGW456L13_4989 0.86 +0.1 5,567,517 - +0.6 5,567,517 - +1.6 5,567,517 - PfGW456L13_4989 0.86 -0.4 5,567,517 - PfGW456L13_4989 0.86 +0.7 5,567,517 - PfGW456L13_4989 0.86 -0.9 5,567,517 - PfGW456L13_4989 0.86 +0.6 5,567,517 - PfGW456L13_4989 0.86 +0.1 5,567,517 - PfGW456L13_4989 0.86 -0.2 5,567,517 - PfGW456L13_4989 0.86 +0.5 5,567,517 - PfGW456L13_4989 0.86 -0.2 5,567,517 - PfGW456L13_4989 0.86 -0.0 5,567,517 - PfGW456L13_4989 0.86 +0.9 5,567,517 - PfGW456L13_4989 0.86 +0.3 5,567,517 - PfGW456L13_4989 0.86 +0.1 5,567,517 - PfGW456L13_4989 0.86 -1.4 5,567,517 - PfGW456L13_4989 0.86 -0.1 5,567,517 - PfGW456L13_4989 0.86 +0.7 5,567,517 - PfGW456L13_4989 0.86 -0.4 5,567,517 - PfGW456L13_4989 0.86 +0.9 5,567,517 - PfGW456L13_4989 0.86 -0.7 5,567,517 - PfGW456L13_4989 0.86 +0.1 5,567,517 - PfGW456L13_4989 0.86 +0.4
Or see this region's nucleotide sequence