Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS24415

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
5,470,197	+		PFLU_RS24405	0.82	-0.7
5,470,197	+		PFLU_RS24405	0.82	+0.0
5,470,198	-		PFLU_RS24405	0.82	+0.2
5,470,220	+		PFLU_RS24405	0.83	-1.5
5,470,220	+		PFLU_RS24405	0.83	+0.9
5,470,220	+		PFLU_RS24405	0.83	+0.2
5,470,271	+		PFLU_RS24405	0.85	-0.2
5,470,398	+		PFLU_RS24405	0.89	+0.0
5,470,398	+		PFLU_RS24405	0.89	+0.4
5,470,398	+		PFLU_RS24405	0.89	-0.8
5,470,398	+		PFLU_RS24405	0.89	-0.6
5,470,398	+		PFLU_RS24405	0.89	-0.1
5,470,399	-		PFLU_RS24405	0.89	+0.8
5,470,399	-		PFLU_RS24405	0.89	-0.2
5,470,399	-		PFLU_RS24405	0.89	-0.1
5,470,399	-		PFLU_RS24405	0.89	-1.7
5,470,399	-		PFLU_RS24405	0.89	+1.4
5,470,399	-		PFLU_RS24405	0.89	+0.5
5,470,399	-		PFLU_RS24405	0.89	+0.2
5,470,399	-		PFLU_RS24405	0.89	-0.5
5,470,399	-		PFLU_RS24405	0.89	-1.7
5,470,399	-		PFLU_RS24405	0.89	+2.9
5,470,439	+				-0.2
5,470,439	+				-1.4
5,470,440	-				+0.6
5,470,634	+				+1.7
5,470,635	-				-0.2
5,470,673	+				-1.6
5,470,673	+				+0.2
5,470,673	+				-0.3
5,470,673	+				+0.1
5,470,674	-				-1.7
5,470,674	-				-0.1
5,470,674	-				+0.2
5,470,674	-				+0.9
5,470,674	-				+0.3
5,470,674	-				-1.5
5,470,674	-				+0.4
5,470,674	-				-0.4
5,470,674	-				-0.4
5,470,698	+				-0.4
5,470,698	+				+0.3
5,470,698	+				-0.2
5,470,698	+				-2.5
5,470,698	+				-0.8
5,470,698	+				+0.4
5,470,699	-				-0.4
5,470,699	-				+1.1
5,470,699	-				+1.6
5,470,699	-				+0.3
5,470,699	-				+1.3
5,470,699	-				+0.2
5,470,699	-				-0.6
5,470,699	-				+1.9
5,470,699	-				-1.0
5,470,700	+				-0.2
5,470,700	+				-0.6
5,470,700	+				+0.6
5,470,700	+				+0.4
5,470,700	+				+1.1
5,470,700	+				-1.5
5,470,700	+				+0.0
5,470,700	+				+0.2
5,470,700	+				-0.3
5,470,700	+				+0.6
5,470,701	-				+0.1
5,470,701	-				+0.8
5,470,701	-				-1.9
5,470,701	-				-0.5
5,470,701	-				-2.7
5,471,004	+				-0.3
5,471,005	-				-0.4
5,471,010	+				-0.1
5,471,058	+				-1.8
5,471,234	-		PFLU_RS24415	0.30	+0.2
5,471,234	-		PFLU_RS24415	0.30	-0.6
5,471,244	+		PFLU_RS24415	0.32	-2.9
5,471,244	+		PFLU_RS24415	0.32	+0.2
5,471,244	+		PFLU_RS24415	0.32	-1.6
5,471,245	-		PFLU_RS24415	0.32	+0.5
5,471,245	-		PFLU_RS24415	0.32	-0.7
5,471,245	-		PFLU_RS24415	0.32	+0.1
5,471,278	+		PFLU_RS24415	0.37	+0.4
5,471,278	+		PFLU_RS24415	0.37	+0.1
5,471,279	-		PFLU_RS24415	0.37	+0.5
5,471,358	+		PFLU_RS24415	0.48	-0.7
5,471,550	+		PFLU_RS24415	0.74	+1.5
5,471,551	-		PFLU_RS24415	0.74	-2.9
5,471,551	-		PFLU_RS24415	0.74	+1.6
5,471,551	-		PFLU_RS24415	0.74	-0.1
5,471,551	-		PFLU_RS24415	0.74	+0.0
5,471,554	+		PFLU_RS24415	0.75	+1.6
5,471,554	+		PFLU_RS24415	0.75	+0.2
5,471,554	+		PFLU_RS24415	0.75	-1.2
5,471,554	+		PFLU_RS24415	0.75	-1.7
5,471,554	+		PFLU_RS24415	0.75	+0.4
5,471,554	+		PFLU_RS24415	0.75	-1.4
5,471,554	+		PFLU_RS24415	0.75	-1.2
5,471,555	-		PFLU_RS24415	0.75	-1.6
5,471,555	-		PFLU_RS24415	0.75	-0.2
5,471,555	-		PFLU_RS24415	0.75	+1.7
5,471,555	-		PFLU_RS24415	0.75	+0.4
5,471,555	-		PFLU_RS24415	0.75	+0.9
5,471,555	-		PFLU_RS24415	0.75	-0.6
5,471,555	-		PFLU_RS24415	0.75	-0.7
5,471,555	-		PFLU_RS24415	0.75	+1.1
5,471,555	-		PFLU_RS24415	0.75	+1.8
5,471,577	+		PFLU_RS24415	0.78	-2.2
5,471,577	+		PFLU_RS24415	0.78	+1.8
5,471,578	-		PFLU_RS24415	0.78	+0.0
5,471,702	+				+0.6
5,471,702	+				+0.2
5,471,702	+				-0.4
5,471,702	+				-0.5
5,471,702	+				+1.3
5,471,702	+				+0.9
5,471,703	-				-0.6
5,471,703	-				-0.1
5,471,703	-				+0.7
5,471,703	-				-0.4
5,471,703	-				+0.1
5,471,703	-				-0.1
5,471,703	-				+0.2
5,471,703	-				-0.6
5,471,703	-				-0.1
5,471,703	-				-1.0
5,471,703	-				+1.0
5,471,740	+				-0.8
5,471,741	-				+0.1
5,471,754	+				-0.6
5,471,754	+				+0.2
5,471,754	+				+0.9
5,471,754	+				-2.2
5,471,754	+				+0.4
5,471,754	+				-1.7
5,471,754	+				-0.4
5,471,755	-				+2.1
5,471,755	-				+1.0
5,471,755	-				+2.0
5,471,755	-				-1.0
5,471,755	-				+1.4
5,471,755	-				-1.6
5,471,755	-				-1.6
5,471,755	-				-0.8
5,471,755	-				-1.0
5,471,755	-				-1.5
5,471,755	-				+0.1
5,471,755	-				-0.7
5,471,755	-				+0.8
5,471,755	-				-1.2
5,471,758	+				+0.2
5,471,758	+				-0.7
5,471,758	+				-0.9
5,471,758	+				-0.2
5,471,758	+				-1.6
5,471,758	+				-3.2
5,471,758	+				-0.9
5,471,758	+				-2.2
5,471,758	+				-2.5
5,471,758	+				+0.8
5,471,758	+				+1.1
5,471,758	+				+0.5
5,471,758	+				+1.7
5,471,758	+				+0.4
5,471,758	+				-1.5
5,471,758	+				+0.6
5,471,758	+				+1.0
5,471,758	+				-1.2
5,471,758	+				-0.1
5,471,758	+				-0.5
5,471,759	-				+0.3
5,471,759	-				+0.7
5,471,759	-				+1.6
5,471,759	-				+0.7
5,471,759	-				-2.1
5,471,759	-				+0.2
5,471,759	-				+0.0
5,471,759	-				-1.3
5,471,759	-				-1.4
5,471,759	-				-0.2
5,471,759	-				-1.0
5,471,759	-				-0.9
5,471,759	-				-1.0
5,471,759	-				+0.4
5,471,759	-				+1.1
5,471,759	-				+0.0
5,471,759	-				-2.7
5,471,776	+				+1.6
5,471,777	-				+2.0
5,471,785	-				+1.1
5,471,785	-				-0.9
5,471,843	+		PFLU_RS24420	0.15	+0.0
5,471,844	-		PFLU_RS24420	0.15	+0.1
5,471,904	+		PFLU_RS24420	0.24	+1.1
5,472,029	+		PFLU_RS24420	0.43	-0.3
5,472,029	+		PFLU_RS24420	0.43	+1.9
5,472,030	-		PFLU_RS24420	0.43	+1.1
5,472,030	-		PFLU_RS24420	0.43	+0.5
5,472,071	+		PFLU_RS24420	0.49	+0.5
5,472,072	-		PFLU_RS24420	0.49	-1.0
5,472,072	-		PFLU_RS24420	0.49	-0.7
5,472,297	+		PFLU_RS24420	0.82	-2.0
5,472,359	-				+1.2
5,472,359	-				-0.6
5,472,359	-				+1.6
5,472,382	+				+0.1
5,472,383	-				-1.0
5,472,414	-				+1.2
5,472,434	+				+2.1
5,472,434	+				+1.0
5,472,434	+				-2.1
5,472,434	+				-1.0
5,472,435	-				-1.7
5,472,435	-				-2.9
5,472,435	-				-3.0
5,472,435	-				-1.0
5,472,444	+				+0.4
5,472,444	+				+0.4
5,472,444	+				+0.7
5,472,444	+				-0.8
5,472,444	+				+0.3
5,472,444	+				-1.2
5,472,444	+				-0.9
5,472,445	-				+0.7
5,472,445	-				-0.7
5,472,452	+				+0.3
5,472,452	+				-2.1
5,472,452	+				-2.6
5,472,453	-				-1.3
5,472,453	-				-3.0
5,472,603	-				+0.8