Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22240

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
4,999,324	+		PFLU_RS22235	0.67	-0.5
4,999,325	-		PFLU_RS22235	0.67	+1.4
4,999,325	-		PFLU_RS22235	0.67	+0.5
4,999,325	-		PFLU_RS22235	0.67	-0.4
4,999,325	-		PFLU_RS22235	0.67	-2.4
4,999,747	-				-0.5
4,999,747	-				-0.2
4,999,873	+				+1.1
4,999,874	-				-0.0
4,999,874	-				+1.1
4,999,937	+				+0.3
4,999,992	-				+0.5
4,999,992	-				-2.4
4,999,992	-				+0.0
4,999,992	-				+0.4
4,999,992	-				-0.7
4,999,992	-				+1.4
4,999,992	-				+0.1
4,999,992	-				-0.4
5,000,010	-				+1.1
5,000,148	+				+0.8
5,000,148	+				-1.5
5,000,148	+				-1.0
5,000,148	+				-3.2
5,000,149	-				+0.2
5,000,213	+				-0.3
5,000,213	+				+1.4
5,000,213	+				-1.3
5,000,213	+				-1.7
5,000,213	+				+0.1
5,000,213	+				+0.7
5,000,213	+				+2.0
5,000,213	+				+1.4
5,000,213	+				+0.7
5,000,213	+				+0.6
5,000,213	+				-0.2
5,000,213	+				-1.6
5,000,213	+				+0.9
5,000,213	+				-0.2
5,000,213	+				+0.6
5,000,213	+				-0.7
5,000,213	+				+1.1
5,000,213	+				-0.1
5,000,213	+				+1.4
5,000,213	+				+1.2
5,000,214	-				-1.3
5,000,214	-				-0.2
5,000,214	-				-0.2
5,000,214	-				-0.8
5,000,214	-				-1.2
5,000,214	-				+1.3
5,000,214	-				+0.2
5,000,214	-				-1.1
5,000,214	-				-0.6
5,000,214	-				+0.7
5,000,214	-				+0.3
5,000,214	-				+0.2
5,000,214	-				-1.7
5,000,214	-				-0.4
5,000,214	-				+0.4
5,000,214	-				+1.1
5,000,214	-				+0.5
5,000,214	-				-1.0
5,000,214	-				+0.8
5,000,246	+				+0.6
5,000,246	+				-3.6
5,000,246	+				-2.2
5,000,247	-				-0.4
5,000,247	-				-0.2
5,000,247	-				+0.8
5,000,248	+				+0.9
5,000,248	+				-0.9
5,000,248	+				+1.3
5,000,248	+				+0.8
5,000,248	+				-0.1
5,000,248	+				+0.8
5,000,248	+				-0.2
5,000,248	+				+1.2
5,000,248	+				-1.2
5,000,248	+				-0.5
5,000,248	+				-1.8
5,000,248	+				-0.9
5,000,248	+				+1.4
5,000,248	+				-0.2
5,000,248	+				-1.8
5,000,248	+				+1.0
5,000,248	+				+1.0
5,000,248	+				-0.7
5,000,248	+				-0.5
5,000,248	+				+0.1
5,000,249	-				-0.6
5,000,249	-				+0.7
5,000,249	-				+0.6
5,000,249	-				+0.3
5,000,249	-				-0.0
5,000,249	-				+0.4
5,000,249	-				+1.5
5,000,249	-				+1.3
5,000,249	-				-2.4
5,000,249	-				+0.6
5,000,249	-				-0.1
5,000,260	+				-0.9
5,000,260	+				+0.7
5,000,260	+				+1.0
5,000,261	-				+1.0
5,000,302	+				-0.6
5,000,302	+				-0.6
5,000,302	+				+0.3
5,000,374	+		PFLU_RS22240	0.10	-1.8
5,000,374	+		PFLU_RS22240	0.10	+0.7
5,000,473	+		PFLU_RS22240	0.19	-2.1
5,000,473	+		PFLU_RS22240	0.19	-1.1
5,000,474	-		PFLU_RS22240	0.19	+1.4
5,000,474	-		PFLU_RS22240	0.19	-0.5
5,000,488	+		PFLU_RS22240	0.20	-1.2
5,000,488	+		PFLU_RS22240	0.20	+0.4
5,000,548	+		PFLU_RS22240	0.26	-2.2
5,000,548	+		PFLU_RS22240	0.26	-1.0
5,000,548	+		PFLU_RS22240	0.26	+0.9
5,000,548	+		PFLU_RS22240	0.26	+1.8
5,000,549	-		PFLU_RS22240	0.26	-0.8
5,000,549	-		PFLU_RS22240	0.26	+3.1
5,000,549	-		PFLU_RS22240	0.26	+1.2
5,000,549	-		PFLU_RS22240	0.26	+0.8
5,000,549	-		PFLU_RS22240	0.26	-1.2
5,000,549	-		PFLU_RS22240	0.26	+1.9
5,000,674	+		PFLU_RS22240	0.37	-1.9
5,000,674	+		PFLU_RS22240	0.37	+0.7
5,000,699	-		PFLU_RS22240	0.39	+1.5
5,000,720	-		PFLU_RS22240	0.41	+0.5
5,000,720	-		PFLU_RS22240	0.41	-0.0
5,000,720	-		PFLU_RS22240	0.41	-2.6
5,001,103	+		PFLU_RS22240	0.75	-0.5
5,001,103	+		PFLU_RS22240	0.75	+1.3
5,001,103	+		PFLU_RS22240	0.75	-0.2
5,001,104	-		PFLU_RS22240	0.75	+1.0
5,001,104	-		PFLU_RS22240	0.75	+0.1
5,001,154	+		PFLU_RS22240	0.80	-0.4
5,001,154	+		PFLU_RS22240	0.80	+0.1
5,001,154	+		PFLU_RS22240	0.80	+0.6
5,001,155	-		PFLU_RS22240	0.80	+0.5
5,001,155	-		PFLU_RS22240	0.80	-0.5
5,001,155	-		PFLU_RS22240	0.80	+0.5
5,001,155	-		PFLU_RS22240	0.80	+1.0
5,001,155	-		PFLU_RS22240	0.80	-0.6
5,001,164	-		PFLU_RS22240	0.80	+1.1
5,001,396	+				-0.4
5,001,396	+				+0.9
5,001,397	-				-0.9
5,001,481	+				+0.4
5,001,595	+				-0.4
5,001,595	+				-0.1
5,001,595	+				+0.7
5,001,595	+				-0.3
5,001,595	+				+0.9
5,001,595	+				-0.9
5,001,596	-				+0.0
5,001,596	-				-1.2
5,001,596	-				+0.6
5,001,596	-				-2.1
5,001,667	+				+0.2
5,001,667	+				+2.9
5,001,668	-				-0.5
5,001,668	-				+0.4
5,001,685	+				-1.1
5,001,718	-				+1.2
5,001,718	-				+1.0
5,001,757	+				+2.2
5,001,806	+		PFLU_RS22245	0.10	+0.3
5,001,806	+		PFLU_RS22245	0.10	+0.0
5,001,806	+		PFLU_RS22245	0.10	+0.6
5,001,806	+		PFLU_RS22245	0.10	-0.6
5,001,807	-		PFLU_RS22245	0.10	-0.5
5,001,807	-		PFLU_RS22245	0.10	+0.1
5,001,807	-		PFLU_RS22245	0.10	+0.2
5,001,807	-		PFLU_RS22245	0.10	-0.1
5,002,088	+		PFLU_RS22245	0.31	-1.1
5,002,089	-		PFLU_RS22245	0.31	+0.1
5,002,120	+		PFLU_RS22245	0.34	-0.2
5,002,120	+		PFLU_RS22245	0.34	-0.5
5,002,181	+		PFLU_RS22245	0.38	-3.5
5,002,181	+		PFLU_RS22245	0.38	+0.4
5,002,181	+		PFLU_RS22245	0.38	+0.1
5,002,182	-		PFLU_RS22245	0.38	-0.8
5,002,190	-		PFLU_RS22245	0.39	+0.9
5,002,217	+		PFLU_RS22245	0.41	+1.1
5,002,217	+		PFLU_RS22245	0.41	-1.4
5,002,218	-		PFLU_RS22245	0.41	+1.0
5,002,218	-		PFLU_RS22245	0.41	+0.6
5,002,218	-		PFLU_RS22245	0.41	+1.7
5,002,218	-		PFLU_RS22245	0.41	-0.6
5,002,226	+		PFLU_RS22245	0.42	-0.2
5,002,227	-		PFLU_RS22245	0.42	-0.2
5,002,227	-		PFLU_RS22245	0.42	+0.2
5,002,227	-		PFLU_RS22245	0.42	+0.3
5,002,346	+		PFLU_RS22245	0.50	-2.0
5,002,346	+		PFLU_RS22245	0.50	+0.1
5,002,346	+		PFLU_RS22245	0.50	-1.9
5,002,346	+		PFLU_RS22245	0.50	+0.0
5,002,346	+		PFLU_RS22245	0.50	+0.3
5,002,346	+		PFLU_RS22245	0.50	-2.7
5,002,346	+		PFLU_RS22245	0.50	-3.6
5,002,346	+		PFLU_RS22245	0.50	-0.7
5,002,346	+		PFLU_RS22245	0.50	-2.5
5,002,346	+		PFLU_RS22245	0.50	+0.2
5,002,346	+		PFLU_RS22245	0.50	+0.7
5,002,346	+		PFLU_RS22245	0.50	-1.6
5,002,346	+		PFLU_RS22245	0.50	-0.3
5,002,346	+		PFLU_RS22245	0.50	-1.2
5,002,346	+		PFLU_RS22245	0.50	+1.7
5,002,347	-		PFLU_RS22245	0.51	+1.1
5,002,347	-		PFLU_RS22245	0.51	+0.7
5,002,347	-		PFLU_RS22245	0.51	-2.4
5,002,347	-		PFLU_RS22245	0.51	+0.2
5,002,347	-		PFLU_RS22245	0.51	-0.3
5,002,347	-		PFLU_RS22245	0.51	-1.3
5,002,347	-		PFLU_RS22245	0.51	+0.3
5,002,347	-		PFLU_RS22245	0.51	+0.1
5,002,347	-		PFLU_RS22245	0.51	+0.5
5,002,347	-		PFLU_RS22245	0.51	+1.4