Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS18960

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
4,287,464	+		PFLU_RS18955	0.57	+1.1
4,287,464	+		PFLU_RS18955	0.57	+0.1
4,287,464	+		PFLU_RS18955	0.57	+0.1
4,287,465	-		PFLU_RS18955	0.57	+1.1
4,287,465	-		PFLU_RS18955	0.57	+0.5
4,287,580	+		PFLU_RS18955	0.70	-1.9
4,287,580	+		PFLU_RS18955	0.70	+0.8
4,287,580	+		PFLU_RS18955	0.70	-1.2
4,287,581	-		PFLU_RS18955	0.70	-1.9
4,287,581	-		PFLU_RS18955	0.70	-0.6
4,287,584	+		PFLU_RS18955	0.70	-1.1
4,287,584	+		PFLU_RS18955	0.70	+0.8
4,287,584	+		PFLU_RS18955	0.70	+0.6
4,287,584	+		PFLU_RS18955	0.70	+0.4
4,287,584	+		PFLU_RS18955	0.70	+0.5
4,287,584	+		PFLU_RS18955	0.70	-0.4
4,287,584	+		PFLU_RS18955	0.70	-0.7
4,287,584	+		PFLU_RS18955	0.70	-0.7
4,287,584	+		PFLU_RS18955	0.70	-1.2
4,287,584	+		PFLU_RS18955	0.70	-0.3
4,287,584	+		PFLU_RS18955	0.70	-2.7
4,287,585	-		PFLU_RS18955	0.70	-1.9
4,287,585	-		PFLU_RS18955	0.70	-0.7
4,287,585	-		PFLU_RS18955	0.70	+0.5
4,287,585	-		PFLU_RS18955	0.70	-0.4
4,287,585	-		PFLU_RS18955	0.70	-0.2
4,287,585	-		PFLU_RS18955	0.70	-0.3
4,287,585	-		PFLU_RS18955	0.70	-0.3
4,287,585	-		PFLU_RS18955	0.70	+1.0
4,287,585	-		PFLU_RS18955	0.70	-0.6
4,287,585	-		PFLU_RS18955	0.70	-0.3
4,287,585	-		PFLU_RS18955	0.70	+0.3
4,287,585	-		PFLU_RS18955	0.70	+0.1
4,287,608	+		PFLU_RS18955	0.73	-2.1
4,287,608	+		PFLU_RS18955	0.73	-1.9
4,287,608	+		PFLU_RS18955	0.73	+0.7
4,287,608	+		PFLU_RS18955	0.73	+0.3
4,287,608	+		PFLU_RS18955	0.73	+1.5
4,287,609	-		PFLU_RS18955	0.73	+1.5
4,287,609	-		PFLU_RS18955	0.73	+0.1
4,287,609	-		PFLU_RS18955	0.73	-1.2
4,287,649	+		PFLU_RS18955	0.78	-1.8
4,287,675	-		PFLU_RS18955	0.80	+3.7
4,287,719	+		PFLU_RS18955	0.85	-1.2
4,287,719	+		PFLU_RS18955	0.85	+0.8
4,287,719	+		PFLU_RS18955	0.85	-1.5
4,287,719	+		PFLU_RS18955	0.85	-1.9
4,287,719	+		PFLU_RS18955	0.85	+1.2
4,287,719	+		PFLU_RS18955	0.85	-0.8
4,287,719	+		PFLU_RS18955	0.85	+1.0
4,287,852	+				-1.7
4,287,852	+				-0.4
4,287,853	-				-1.2
4,287,853	-				-0.9
4,287,857	+				+1.1
4,287,885	+				-0.2
4,287,885	+				-0.2
4,287,886	-				+0.4
4,287,897	-				-2.7
4,287,909	+				-0.8
4,287,909	+				-0.5
4,287,909	+				-1.3
4,287,909	+				-1.6
4,287,909	+				-0.4
4,287,909	+				-0.2
4,287,909	+				-2.0
4,287,909	+				+0.0
4,287,909	+				-1.2
4,287,910	-				+0.1
4,287,910	-				-2.2
4,287,910	-				+0.6
4,287,910	-				+0.0
4,287,910	-				-0.9
4,287,910	-				+0.6
4,287,910	-				-1.1
4,287,910	-				+0.7
4,287,919	+				-0.0
4,287,919	+				+0.4
4,287,919	+				-0.7
4,287,998	+				-0.1
4,287,998	+				-2.2
4,288,020	+				-2.7
4,288,021	-				+0.3
4,288,039	+				-0.4
4,288,039	+				-0.9
4,288,040	-				+0.3
4,288,066	+				-3.4
4,288,066	+				-0.9
4,288,067	-				-1.0
4,288,095	+				+1.4
4,288,096	-				+0.7
4,288,096	-				-1.8
4,288,168	+				+1.3
4,288,168	+				-1.4
4,288,174	+				+0.0
4,288,183	+				-2.3
4,288,183	+				-0.0
4,288,183	+				-0.3
4,288,183	+				+0.3
4,288,183	+				-1.1
4,288,184	-				+0.8
4,288,184	-				-0.6
4,288,184	-				+0.5
4,288,184	-				-0.4
4,288,184	-				+0.1
4,288,184	-				+0.2
4,288,187	+				-0.9
4,288,237	+				-4.2
4,288,237	+				-0.3
4,288,310	+				-0.6
4,288,310	+				+0.5
4,288,310	+				-1.5
4,288,310	+				+0.6
4,288,310	+				+1.1
4,288,310	+				+0.1
4,288,310	+				-3.0
4,288,310	+				+0.0
4,288,310	+				+0.8
4,288,310	+				+0.6
4,288,310	+				-0.9
4,288,311	-				+0.9
4,288,311	-				+1.0
4,288,311	-				+0.8
4,288,311	-				-1.9
4,288,311	-				-0.8
4,288,311	-				+2.7
4,288,311	-				-0.1
4,288,326	-				+1.0
4,288,326	-				+0.6
4,288,326	-				-0.5
4,288,328	+				+0.6
4,288,329	-				-1.9
4,288,355	-				+1.5
4,288,465	+				-1.0
4,288,466	-				-2.2
4,288,567	+				-1.2
4,288,567	+				-2.2
4,288,567	+				+0.5
4,288,567	+				+0.3
4,288,568	-				-0.9
4,288,568	-				+0.9
4,288,568	-				+1.4
4,288,568	-				+1.6
4,288,568	-				-0.2
4,288,568	-				+1.9
4,288,678	+		PFLU_RS18960	0.13	+0.9
4,288,817	-		PFLU_RS18960	0.22	-0.4
4,288,925	-		PFLU_RS18960	0.28	+0.6
4,288,967	+		PFLU_RS18960	0.31	-1.0
4,288,968	-		PFLU_RS18960	0.31	+0.5
4,288,968	-		PFLU_RS18960	0.31	-0.8
4,289,257	+		PFLU_RS18960	0.48	+1.1
4,289,258	-		PFLU_RS18960	0.48	+1.3
4,289,327	-		PFLU_RS18960	0.53	+0.1
4,289,389	+		PFLU_RS18960	0.56	+0.4
4,289,389	+		PFLU_RS18960	0.56	+1.0
4,289,389	+		PFLU_RS18960	0.56	+1.9
4,289,389	+		PFLU_RS18960	0.56	-0.4
4,289,389	+		PFLU_RS18960	0.56	+2.0
4,289,389	+		PFLU_RS18960	0.56	-0.4
4,289,389	+		PFLU_RS18960	0.56	+0.3
4,289,389	+		PFLU_RS18960	0.56	-2.5
4,289,390	-		PFLU_RS18960	0.57	+1.2
4,289,390	-		PFLU_RS18960	0.57	-1.1
4,289,390	-		PFLU_RS18960	0.57	+1.2
4,289,390	-		PFLU_RS18960	0.57	-0.5
4,289,452	+		PFLU_RS18960	0.60	-0.4
4,289,452	+		PFLU_RS18960	0.60	+0.5
4,289,452	+		PFLU_RS18960	0.60	+0.8
4,289,452	+		PFLU_RS18960	0.60	+1.5
4,289,452	+		PFLU_RS18960	0.60	-0.3
4,289,453	-		PFLU_RS18960	0.60	+0.4
4,289,453	-		PFLU_RS18960	0.60	+0.3
4,289,453	-		PFLU_RS18960	0.60	-0.0
4,289,522	-		PFLU_RS18960	0.65	-1.6
4,289,702	-		PFLU_RS18960	0.76	-2.2
4,289,764	+		PFLU_RS18960	0.79	-0.7
4,289,764	+		PFLU_RS18960	0.79	-0.2
4,289,764	+		PFLU_RS18960	0.79	+2.1
4,289,764	+		PFLU_RS18960	0.79	-0.4
4,289,765	-		PFLU_RS18960	0.79	+0.2
4,289,765	-		PFLU_RS18960	0.79	+0.9
4,289,765	-		PFLU_RS18960	0.79	+1.1
4,289,765	-		PFLU_RS18960	0.79	+0.1
4,289,765	-		PFLU_RS18960	0.79	-0.8
4,289,785	+		PFLU_RS18960	0.81	+0.1
4,289,786	-		PFLU_RS18960	0.81	+0.2
4,289,798	+		PFLU_RS18960	0.81	-2.0
4,289,874	-		PFLU_RS18960	0.86	-0.2
4,289,925	+		PFLU_RS18960	0.89	+2.7
4,289,925	+		PFLU_RS18960	0.89	+0.3
4,289,925	+		PFLU_RS18960	0.89	+0.1
4,289,925	+		PFLU_RS18960	0.89	-1.2
4,289,926	-		PFLU_RS18960	0.89	-0.0
4,289,926	-		PFLU_RS18960	0.89	-1.7
4,289,926	-		PFLU_RS18960	0.89	+1.8
4,289,926	-		PFLU_RS18960	0.89	+0.0
4,289,926	-		PFLU_RS18960	0.89	-0.1
4,289,926	-		PFLU_RS18960	0.89	-1.9
4,289,960	-				+1.1
4,289,960	-				-1.9
4,290,079	+				-0.3
4,290,079	+				-1.3
4,290,080	-				+2.6
4,290,080	-				+1.4
4,290,080	-				+1.8
4,290,080	-				-0.3
4,290,125	+				+0.7
4,290,238	+				+0.7
4,290,238	+				+0.1
4,290,238	+				+0.6
4,290,239	-				-2.4
4,290,257	+				-0.4
4,290,258	-				-2.2
4,290,524	+		PFLU_RS18965	0.23	-1.4
4,290,525	-		PFLU_RS18965	0.24	-3.2
4,290,593	+		PFLU_RS18965	0.29	+1.7
4,290,593	+		PFLU_RS18965	0.29	-1.0
4,290,593	+		PFLU_RS18965	0.29	+0.3
4,290,594	-		PFLU_RS18965	0.29	-0.4
4,290,594	-		PFLU_RS18965	0.29	+0.5
4,290,594	-		PFLU_RS18965	0.29	-0.6
4,290,594	-		PFLU_RS18965	0.29	-1.1
4,290,594	-		PFLU_RS18965	0.29	-0.2
4,290,594	-		PFLU_RS18965	0.29	+0.8
4,290,594	-		PFLU_RS18965	0.29	+1.0
4,290,707	+		PFLU_RS18965	0.39	+1.3
4,290,707	+		PFLU_RS18965	0.39	+0.3
4,290,707	+		PFLU_RS18965	0.39	-1.0
4,290,707	+		PFLU_RS18965	0.39	-0.1
4,290,708	-		PFLU_RS18965	0.39	-3.8
4,290,761	+		PFLU_RS18965	0.44	-0.6
4,290,761	+		PFLU_RS18965	0.44	+0.3
4,290,761	+		PFLU_RS18965	0.44	+0.4
4,290,761	+		PFLU_RS18965	0.44	+1.4
4,290,761	+		PFLU_RS18965	0.44	-1.1
4,290,761	+		PFLU_RS18965	0.44	+0.5
4,290,761	+		PFLU_RS18965	0.44	+1.9
4,290,761	+		PFLU_RS18965	0.44	-1.2
4,290,761	+		PFLU_RS18965	0.44	-2.6
4,290,761	+		PFLU_RS18965	0.44	-0.2
4,290,761	+		PFLU_RS18965	0.44	-0.2
4,290,761	+		PFLU_RS18965	0.44	-0.7
4,290,761	+		PFLU_RS18965	0.44	-3.4
4,290,761	+		PFLU_RS18965	0.44	-1.2
4,290,761	+		PFLU_RS18965	0.44	-0.5
4,290,761	+		PFLU_RS18965	0.44	-0.5
4,290,762	-		PFLU_RS18965	0.44	+0.1
4,290,762	-		PFLU_RS18965	0.44	-0.1
4,290,762	-		PFLU_RS18965	0.44	+0.7
4,290,762	-		PFLU_RS18965	0.44	-0.2
4,290,762	-		PFLU_RS18965	0.44	-2.6
4,290,762	-		PFLU_RS18965	0.44	+0.6
4,290,762	-		PFLU_RS18965	0.44	+0.2
4,290,762	-		PFLU_RS18965	0.44	-0.0
4,290,762	-		PFLU_RS18965	0.44	-1.3
4,290,762	-		PFLU_RS18965	0.44	+0.2
4,290,770	+		PFLU_RS18965	0.45	-0.2
4,290,770	+		PFLU_RS18965	0.45	+0.4
4,290,771	-		PFLU_RS18965	0.45	-1.3
4,290,771	-		PFLU_RS18965	0.45	+0.7
4,290,771	-		PFLU_RS18965	0.45	+0.1
4,290,771	-		PFLU_RS18965	0.45	-0.0
4,290,771	-		PFLU_RS18965	0.45	-0.2
4,290,771	-		PFLU_RS18965	0.45	-0.5
4,290,986	+		PFLU_RS18965	0.63	-0.9
4,291,055	+		PFLU_RS18965	0.69	+0.3
4,291,055	+		PFLU_RS18965	0.69	+0.4
4,291,055	+		PFLU_RS18965	0.69	-1.4
4,291,055	+		PFLU_RS18965	0.69	-1.4
4,291,056	-		PFLU_RS18965	0.69	+0.3
4,291,056	-		PFLU_RS18965	0.69	+1.0
4,291,056	-		PFLU_RS18965	0.69	+0.0