Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS16920

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
3,834,798	+		PFLU_RS16915	0.24	-1.0
3,834,906	+		PFLU_RS16915	0.34	-3.0
3,834,906	+		PFLU_RS16915	0.34	+0.3
3,834,906	+		PFLU_RS16915	0.34	-1.7
3,834,906	+		PFLU_RS16915	0.34	-2.0
3,834,906	+		PFLU_RS16915	0.34	+0.8
3,834,906	+		PFLU_RS16915	0.34	+0.3
3,834,906	+		PFLU_RS16915	0.34	-0.4
3,834,907	-		PFLU_RS16915	0.34	-2.2
3,834,907	-		PFLU_RS16915	0.34	-0.2
3,834,907	-		PFLU_RS16915	0.34	+0.7
3,834,907	-		PFLU_RS16915	0.34	+0.2
3,834,907	-		PFLU_RS16915	0.34	-1.0
3,834,972	+		PFLU_RS16915	0.40	+0.1
3,835,021	-		PFLU_RS16915	0.44	-0.6
3,835,021	-		PFLU_RS16915	0.44	+0.9
3,835,134	+		PFLU_RS16915	0.54	-0.2
3,835,134	+		PFLU_RS16915	0.54	+0.5
3,835,134	+		PFLU_RS16915	0.54	-0.9
3,835,134	+		PFLU_RS16915	0.54	-1.2
3,835,134	+		PFLU_RS16915	0.54	+0.8
3,835,134	+		PFLU_RS16915	0.54	+0.7
3,835,134	+		PFLU_RS16915	0.54	+0.6
3,835,134	+		PFLU_RS16915	0.54	+0.5
3,835,134	+		PFLU_RS16915	0.54	-3.5
3,835,134	+		PFLU_RS16915	0.54	+0.2
3,835,134	+		PFLU_RS16915	0.54	+0.3
3,835,134	+		PFLU_RS16915	0.54	+2.7
3,835,134	+		PFLU_RS16915	0.54	+0.0
3,835,134	+		PFLU_RS16915	0.54	-0.2
3,835,134	+		PFLU_RS16915	0.54	-0.4
3,835,134	+		PFLU_RS16915	0.54	-0.4
3,835,134	+		PFLU_RS16915	0.54	-0.9
3,835,134	+		PFLU_RS16915	0.54	-1.0
3,835,134	+		PFLU_RS16915	0.54	+0.3
3,835,134	+		PFLU_RS16915	0.54	-1.4
3,835,134	+		PFLU_RS16915	0.54	-0.3
3,835,134	+		PFLU_RS16915	0.54	+0.4
3,835,134	+		PFLU_RS16915	0.54	+0.5
3,835,135	-		PFLU_RS16915	0.54	-0.4
3,835,135	-		PFLU_RS16915	0.54	-0.2
3,835,135	-		PFLU_RS16915	0.54	+0.5
3,835,135	-		PFLU_RS16915	0.54	-3.5
3,835,135	-		PFLU_RS16915	0.54	+0.8
3,835,135	-		PFLU_RS16915	0.54	-0.5
3,835,135	-		PFLU_RS16915	0.54	-1.2
3,835,135	-		PFLU_RS16915	0.54	-0.5
3,835,135	-		PFLU_RS16915	0.54	-0.1
3,835,135	-		PFLU_RS16915	0.54	+1.8
3,835,135	-		PFLU_RS16915	0.54	-0.7
3,835,135	-		PFLU_RS16915	0.54	+0.6
3,835,168	-		PFLU_RS16915	0.57	-1.9
3,835,236	+		PFLU_RS16915	0.63	+1.2
3,835,237	-		PFLU_RS16915	0.63	+1.8
3,835,237	-		PFLU_RS16915	0.63	+0.1
3,835,273	-		PFLU_RS16915	0.66	+0.6
3,835,273	-		PFLU_RS16915	0.66	-2.3
3,835,273	-		PFLU_RS16915	0.66	-1.2
3,835,273	-		PFLU_RS16915	0.66	+0.8
3,835,348	-		PFLU_RS16915	0.73	+0.6
3,835,350	+		PFLU_RS16915	0.73	-2.9
3,835,350	+		PFLU_RS16915	0.73	-0.6
3,835,350	+		PFLU_RS16915	0.73	-0.4
3,835,351	-		PFLU_RS16915	0.73	-3.4
3,835,351	-		PFLU_RS16915	0.73	-0.6
3,835,351	-		PFLU_RS16915	0.73	+1.6
3,835,351	-		PFLU_RS16915	0.73	-0.3
3,835,351	-		PFLU_RS16915	0.73	-0.5
3,835,364	+		PFLU_RS16915	0.74	-1.9
3,835,364	+		PFLU_RS16915	0.74	-1.4
3,835,392	+		PFLU_RS16915	0.76	+0.9
3,835,392	+		PFLU_RS16915	0.76	+0.3
3,835,392	+		PFLU_RS16915	0.76	-0.5
3,835,393	-		PFLU_RS16915	0.76	+0.1
3,835,509	+		PFLU_RS16915	0.87	-0.3
3,835,509	+		PFLU_RS16915	0.87	-0.2
3,835,510	-		PFLU_RS16915	0.87	+1.5
3,835,554	+				-0.4
3,835,554	+				+0.1
3,835,554	+				-0.5
3,835,554	+				+0.1
3,835,554	+				+0.5
3,835,555	-				+2.0
3,835,555	-				+1.3
3,835,555	-				-0.7
3,835,555	-				+0.4
3,835,585	+				-0.7
3,835,674	+				+0.5
3,835,674	+				+0.3
3,835,675	-				+0.5
3,835,675	-				+0.7
3,835,775	+				+0.6
3,835,776	-				+0.6
3,835,776	-				+0.5
3,835,776	-				+0.1
3,835,776	-				-0.6
3,835,776	-				-0.4
3,835,776	-				-0.5
3,835,796	+				-0.2
3,835,796	+				+1.2
3,835,796	+				+1.6
3,835,796	+				-1.7
3,835,796	+				+0.9
3,835,797	-				+0.5
3,835,797	-				-1.6
3,835,797	-				-1.0
3,835,797	-				-0.2
3,835,797	-				-1.1
3,835,797	-				+0.9
3,835,797	-				+2.7
3,835,800	+				+0.6
3,835,841	+				+1.3
3,835,841	+				-2.2
3,835,841	+				+0.3
3,835,841	+				+0.4
3,835,841	+				-0.1
3,835,842	-				-1.0
3,835,842	-				-1.2
3,835,842	-				+1.5
3,835,842	-				+0.5
3,835,983	+		PFLU_RS16920	0.15	-0.6
3,836,310	-		PFLU_RS16920	0.40	-0.3
3,836,384	+		PFLU_RS16920	0.46	+1.5
3,836,384	+		PFLU_RS16920	0.46	-1.5
3,836,384	+		PFLU_RS16920	0.46	-1.5
3,836,384	+		PFLU_RS16920	0.46	+0.8
3,836,385	-		PFLU_RS16920	0.46	-1.9
3,836,385	-		PFLU_RS16920	0.46	-1.3
3,836,507	+		PFLU_RS16920	0.56	-0.7
3,836,507	+		PFLU_RS16920	0.56	-3.1
3,836,507	+		PFLU_RS16920	0.56	+0.2
3,836,508	-		PFLU_RS16920	0.56	+0.1
3,836,508	-		PFLU_RS16920	0.56	-2.5
3,836,600	+		PFLU_RS16920	0.63	+0.6
3,836,600	+		PFLU_RS16920	0.63	-2.0
3,836,601	-		PFLU_RS16920	0.63	-0.6
3,836,601	-		PFLU_RS16920	0.63	+0.2
3,836,653	-		PFLU_RS16920	0.67	+0.7
3,836,653	-		PFLU_RS16920	0.67	-0.5
3,836,913	+		PFLU_RS16920	0.87	+1.7
3,836,913	+		PFLU_RS16920	0.87	+1.5
3,836,913	+		PFLU_RS16920	0.87	+0.1
3,836,914	-		PFLU_RS16920	0.87	+1.0
3,836,914	-		PFLU_RS16920	0.87	-0.0
3,836,914	-		PFLU_RS16920	0.87	-0.6
3,836,914	-		PFLU_RS16920	0.87	-0.5
3,836,914	-		PFLU_RS16920	0.87	+0.4
3,836,914	-		PFLU_RS16920	0.87	-1.1
3,836,915	+		PFLU_RS16920	0.87	-0.6
3,836,915	+		PFLU_RS16920	0.87	+1.2
3,836,916	-		PFLU_RS16920	0.88	-0.3
3,836,916	-		PFLU_RS16920	0.88	-0.7
3,836,916	-		PFLU_RS16920	0.88	+0.5
3,836,916	-		PFLU_RS16920	0.88	-0.9
3,836,916	-		PFLU_RS16920	0.88	-0.3
3,837,040	+				+1.0
3,837,040	+				+2.4
3,837,040	+				+0.1
3,837,046	+				-1.2
3,837,047	-				-0.6
3,837,059	-				-2.2
3,837,307	+		PFLU_RS16925	0.37	+0.8
3,837,307	+		PFLU_RS16925	0.37	-0.7
3,837,307	+		PFLU_RS16925	0.37	-0.1
3,837,308	-		PFLU_RS16925	0.37	+1.9
3,837,308	-		PFLU_RS16925	0.37	+1.0
3,837,435	+		PFLU_RS16925	0.57	+0.8
3,837,436	-		PFLU_RS16925	0.57	-0.7
3,837,598	+		PFLU_RS16925	0.83	+0.4
3,837,598	+		PFLU_RS16925	0.83	+2.0
3,837,598	+		PFLU_RS16925	0.83	+0.9
3,837,598	+		PFLU_RS16925	0.83	+0.2
3,837,599	-		PFLU_RS16925	0.83	+1.1
3,837,599	-		PFLU_RS16925	0.83	-0.7
3,837,599	-		PFLU_RS16925	0.83	+0.3
3,837,599	-		PFLU_RS16925	0.83	+0.8
3,837,599	-		PFLU_RS16925	0.83	-0.2
3,837,599	-		PFLU_RS16925	0.83	+1.4
3,837,599	-		PFLU_RS16925	0.83	-1.2
3,837,619	+		PFLU_RS16925	0.86	+0.1
3,837,619	+		PFLU_RS16925	0.86	+1.4
3,837,620	-		PFLU_RS16925	0.86	-0.9
3,837,620	-		PFLU_RS16925	0.86	+0.4
3,837,662	+				-0.3
3,837,696	+				+1.5
3,837,742	-				+0.3