Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09585

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
2,116,433	-		PFLU_RS09580	0.18	+0.2
2,116,563	-		PFLU_RS09580	0.29	+1.0
2,116,563	-		PFLU_RS09580	0.29	-0.7
2,116,563	-		PFLU_RS09580	0.29	-0.1
2,116,703	+		PFLU_RS09580	0.41	-0.2
2,116,703	+		PFLU_RS09580	0.41	-1.8
2,116,703	+		PFLU_RS09580	0.41	+0.5
2,116,704	-		PFLU_RS09580	0.41	+1.3
2,116,704	-		PFLU_RS09580	0.41	-1.0
2,116,704	-		PFLU_RS09580	0.41	+0.3
2,116,704	-		PFLU_RS09580	0.41	-1.1
2,116,704	-		PFLU_RS09580	0.41	-3.5
2,116,704	-		PFLU_RS09580	0.41	+0.1
2,116,712	+		PFLU_RS09580	0.42	-0.2
2,116,713	-		PFLU_RS09580	0.42	-0.2
2,116,718	+		PFLU_RS09580	0.43	-1.0
2,116,718	+		PFLU_RS09580	0.43	+0.5
2,116,718	+		PFLU_RS09580	0.43	-0.0
2,116,718	+		PFLU_RS09580	0.43	+1.7
2,116,718	+		PFLU_RS09580	0.43	+0.1
2,116,719	-		PFLU_RS09580	0.43	+0.4
2,116,719	-		PFLU_RS09580	0.43	-2.8
2,116,719	-		PFLU_RS09580	0.43	-0.7
2,116,719	-		PFLU_RS09580	0.43	+0.6
2,116,719	-		PFLU_RS09580	0.43	-1.7
2,116,719	-		PFLU_RS09580	0.43	+0.2
2,116,719	-		PFLU_RS09580	0.43	-2.1
2,116,772	+		PFLU_RS09580	0.47	+1.0
2,116,772	+		PFLU_RS09580	0.47	+1.8
2,116,772	+		PFLU_RS09580	0.47	+1.4
2,116,772	+		PFLU_RS09580	0.47	+0.6
2,116,773	-		PFLU_RS09580	0.48	+0.9
2,116,773	-		PFLU_RS09580	0.48	-1.9
2,116,773	-		PFLU_RS09580	0.48	+0.5
2,116,773	-		PFLU_RS09580	0.48	+1.4
2,116,773	-		PFLU_RS09580	0.48	+2.3
2,116,858	+		PFLU_RS09580	0.55	-0.7
2,116,858	+		PFLU_RS09580	0.55	-0.1
2,116,859	-		PFLU_RS09580	0.55	+0.8
2,116,862	-		PFLU_RS09580	0.55	-1.3
2,116,862	-		PFLU_RS09580	0.55	+0.0
2,116,870	+		PFLU_RS09580	0.56	-0.6
2,116,871	-		PFLU_RS09580	0.56	-0.9
2,116,900	+		PFLU_RS09580	0.59	+2.2
2,116,900	+		PFLU_RS09580	0.59	-0.0
2,116,900	+		PFLU_RS09580	0.59	-0.1
2,116,900	+		PFLU_RS09580	0.59	+0.7
2,116,900	+		PFLU_RS09580	0.59	-0.4
2,116,900	+		PFLU_RS09580	0.59	+0.8
2,116,900	+		PFLU_RS09580	0.59	+0.9
2,116,900	+		PFLU_RS09580	0.59	+1.6
2,116,900	+		PFLU_RS09580	0.59	+1.1
2,116,900	+		PFLU_RS09580	0.59	+0.9
2,116,900	+		PFLU_RS09580	0.59	+0.8
2,116,901	-		PFLU_RS09580	0.59	+0.5
2,116,901	-		PFLU_RS09580	0.59	-0.7
2,116,901	-		PFLU_RS09580	0.59	-0.8
2,116,901	-		PFLU_RS09580	0.59	+3.2
2,116,901	-		PFLU_RS09580	0.59	+0.3
2,116,901	-		PFLU_RS09580	0.59	+0.2
2,116,901	-		PFLU_RS09580	0.59	+0.6
2,116,901	-		PFLU_RS09580	0.59	-2.4
2,116,901	-		PFLU_RS09580	0.59	+1.1
2,116,901	-		PFLU_RS09580	0.59	+0.5
2,116,901	-		PFLU_RS09580	0.59	-0.0
2,116,901	-		PFLU_RS09580	0.59	+0.5
2,116,936	+		PFLU_RS09580	0.62	+1.5
2,116,937	-		PFLU_RS09580	0.62	+1.2
2,116,937	-		PFLU_RS09580	0.62	-1.6
2,116,937	-		PFLU_RS09580	0.62	-0.5
2,116,937	-		PFLU_RS09580	0.62	-0.1
2,117,185	+		PFLU_RS09580	0.84	+0.8
2,117,185	+		PFLU_RS09580	0.84	-0.2
2,117,290	+				-2.8
2,117,553	-		PFLU_RS09585	0.14	+2.3
2,117,670	+		PFLU_RS09585	0.24	-1.3
2,117,670	+		PFLU_RS09585	0.24	+0.1
2,117,671	-		PFLU_RS09585	0.24	+1.4
2,117,671	-		PFLU_RS09585	0.24	-0.5
2,117,831	+		PFLU_RS09585	0.38	+0.2
2,117,831	+		PFLU_RS09585	0.38	-2.0
2,117,831	+		PFLU_RS09585	0.38	+1.3
2,117,831	+		PFLU_RS09585	0.38	-0.2
2,117,832	-		PFLU_RS09585	0.38	+0.6
2,117,832	-		PFLU_RS09585	0.38	+0.4
2,117,834	+		PFLU_RS09585	0.38	-0.7
2,117,835	-		PFLU_RS09585	0.39	+0.7
2,117,835	-		PFLU_RS09585	0.39	+0.6
2,118,131	+		PFLU_RS09585	0.64	+0.3
2,118,131	+		PFLU_RS09585	0.64	+0.3
2,118,131	+		PFLU_RS09585	0.64	-0.4
2,118,131	+		PFLU_RS09585	0.64	-0.3
2,118,131	+		PFLU_RS09585	0.64	-1.3
2,118,131	+		PFLU_RS09585	0.64	+0.3
2,118,131	+		PFLU_RS09585	0.64	+0.1
2,118,131	+		PFLU_RS09585	0.64	+1.2
2,118,131	+		PFLU_RS09585	0.64	+0.7
2,118,132	-		PFLU_RS09585	0.64	+0.3
2,118,132	-		PFLU_RS09585	0.64	+0.4
2,118,132	-		PFLU_RS09585	0.64	-1.9
2,118,132	-		PFLU_RS09585	0.64	-1.7
2,118,132	-		PFLU_RS09585	0.64	+0.6
2,118,132	-		PFLU_RS09585	0.64	-0.9
2,118,132	-		PFLU_RS09585	0.64	+0.5
2,118,132	-		PFLU_RS09585	0.64	-2.0
2,118,132	-		PFLU_RS09585	0.64	+0.2
2,118,132	-		PFLU_RS09585	0.64	+1.2
2,118,132	-		PFLU_RS09585	0.64	-1.5
2,118,132	-		PFLU_RS09585	0.64	-1.7
2,118,132	-		PFLU_RS09585	0.64	-3.0
2,118,134	-		PFLU_RS09585	0.64	+0.9
2,118,233	+		PFLU_RS09585	0.73	+0.1
2,118,234	-		PFLU_RS09585	0.73	-1.9
2,118,234	-		PFLU_RS09585	0.73	-2.7
2,118,234	-		PFLU_RS09585	0.73	+0.9
2,118,270	+		PFLU_RS09585	0.76	+0.4
2,118,270	+		PFLU_RS09585	0.76	+1.0
2,118,270	+		PFLU_RS09585	0.76	+1.2
2,118,270	+		PFLU_RS09585	0.76	+1.2
2,118,270	+		PFLU_RS09585	0.76	+1.1
2,118,270	+		PFLU_RS09585	0.76	+0.2
2,118,271	-		PFLU_RS09585	0.76	+2.0
2,118,271	-		PFLU_RS09585	0.76	-1.5
2,118,287	+		PFLU_RS09585	0.77	+0.4
2,118,287	+		PFLU_RS09585	0.77	+0.7
2,118,287	+		PFLU_RS09585	0.77	-0.5
2,118,288	-		PFLU_RS09585	0.77	+1.9
2,118,288	-		PFLU_RS09585	0.77	+0.9
2,118,288	-		PFLU_RS09585	0.77	+0.4
2,118,288	-		PFLU_RS09585	0.77	-0.7
2,118,288	-		PFLU_RS09585	0.77	+0.3
2,118,290	+		PFLU_RS09585	0.78	-1.0
2,118,291	-		PFLU_RS09585	0.78	+1.0
2,118,291	-		PFLU_RS09585	0.78	+0.4
2,118,291	-		PFLU_RS09585	0.78	-0.3
2,118,398	+		PFLU_RS09585	0.87	-2.9
2,118,399	-		PFLU_RS09585	0.87	+0.5
2,118,399	-		PFLU_RS09585	0.87	-0.1
2,118,524	+				-0.4
2,118,524	+				+2.1
2,118,524	+				-2.0
2,118,524	+				+0.1
2,118,524	+				+0.3
2,118,524	+				-2.6
2,118,524	+				-0.1
2,118,524	+				+0.7
2,118,524	+				-0.1
2,118,524	+				-0.8
2,118,524	+				-1.9
2,118,524	+				+1.6
2,118,524	+				-0.0
2,118,524	+				-0.3
2,118,525	-				-1.0
2,118,525	-				+0.6
2,118,525	-				-0.5
2,118,525	-				-0.8
2,118,525	-				-0.5
2,118,525	-				-0.8
2,118,525	-				-0.5
2,118,525	-				-2.8
2,118,525	-				+0.3
2,118,525	-				+1.2
2,118,525	-				-0.3
2,118,525	-				-1.5
2,118,525	-				-0.7
2,118,525	-				+1.1
2,118,539	+				-2.7
2,118,539	+				-0.6
2,118,539	+				-0.1
2,118,539	+				-0.4
2,118,540	-				+0.6
2,118,540	-				-0.7
2,118,615	-		PFLU_RS09590	0.14	-3.4
2,118,630	+		PFLU_RS09590	0.18	+0.9
2,118,630	+		PFLU_RS09590	0.18	-2.7
2,118,630	+		PFLU_RS09590	0.18	+1.4
2,118,630	+		PFLU_RS09590	0.18	+0.4
2,118,630	+		PFLU_RS09590	0.18	+0.9
2,118,630	+		PFLU_RS09590	0.18	-0.6
2,118,630	+		PFLU_RS09590	0.18	-1.0
2,118,631	-		PFLU_RS09590	0.18	+0.7
2,118,631	-		PFLU_RS09590	0.18	-1.7
2,118,631	-		PFLU_RS09590	0.18	-0.0
2,118,631	-		PFLU_RS09590	0.18	+1.6
2,118,631	-		PFLU_RS09590	0.18	+0.8
2,118,631	-		PFLU_RS09590	0.18	-2.8
2,118,631	-		PFLU_RS09590	0.18	-2.3
2,118,631	-		PFLU_RS09590	0.18	+1.1
2,118,631	-		PFLU_RS09590	0.18	-0.0
2,118,721	+		PFLU_RS09590	0.43	+0.9
2,118,721	+		PFLU_RS09590	0.43	-0.4
2,118,722	-		PFLU_RS09590	0.44	-2.4
2,118,722	-		PFLU_RS09590	0.44	-1.7
2,118,769	+		PFLU_RS09590	0.56	-0.7
2,118,769	+		PFLU_RS09590	0.56	+0.4
2,118,957	+				-2.8
2,118,958	-				+0.9
2,118,979	+				-1.0
2,119,089	-		PFLU_RS09595	0.16	+0.4
2,119,089	-		PFLU_RS09595	0.16	-2.7
2,119,177	+		PFLU_RS09595	0.26	-2.8
2,119,177	+		PFLU_RS09595	0.26	-0.8
2,119,178	-		PFLU_RS09595	0.26	+0.1
2,119,178	-		PFLU_RS09595	0.26	+0.0
2,119,236	+		PFLU_RS09595	0.32	+0.3
2,119,344	-		PFLU_RS09595	0.44	+1.3
2,119,379	+		PFLU_RS09595	0.47	-1.2
2,119,379	+		PFLU_RS09595	0.47	-0.7
2,119,379	+		PFLU_RS09595	0.47	-0.2
2,119,379	+		PFLU_RS09595	0.47	-0.8
2,119,379	+		PFLU_RS09595	0.47	+1.3
2,119,380	-		PFLU_RS09595	0.47	+0.5
2,119,380	-		PFLU_RS09595	0.47	-0.4
2,119,380	-		PFLU_RS09595	0.47	-0.3
2,119,380	-		PFLU_RS09595	0.47	+0.7
2,119,380	-		PFLU_RS09595	0.47	+0.8