Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08325

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,862,026	+		PFLU_RS08320	0.43	+1.0
1,862,027	-		PFLU_RS08320	0.43	+1.1
1,862,027	-		PFLU_RS08320	0.43	+0.6
1,862,068	+		PFLU_RS08320	0.46	-0.9
1,862,068	+		PFLU_RS08320	0.46	-1.6
1,862,089	+		PFLU_RS08320	0.47	+1.8
1,862,166	+		PFLU_RS08320	0.51	-0.1
1,862,166	+		PFLU_RS08320	0.51	+0.2
1,862,166	+		PFLU_RS08320	0.51	-0.0
1,862,167	-		PFLU_RS08320	0.51	+0.8
1,862,167	-		PFLU_RS08320	0.51	-0.9
1,862,167	-		PFLU_RS08320	0.51	-2.1
1,862,167	-		PFLU_RS08320	0.51	+0.8
1,862,167	-		PFLU_RS08320	0.51	+1.4
1,862,167	-		PFLU_RS08320	0.51	-2.2
1,862,173	-		PFLU_RS08320	0.52	+0.7
1,862,173	-		PFLU_RS08320	0.52	-1.9
1,862,173	-		PFLU_RS08320	0.52	+1.4
1,862,173	-		PFLU_RS08320	0.52	+0.1
1,862,173	-		PFLU_RS08320	0.52	+0.8
1,862,284	+		PFLU_RS08320	0.58	-0.5
1,862,299	+		PFLU_RS08320	0.59	-0.5
1,862,300	-		PFLU_RS08320	0.59	+0.0
1,862,312	+		PFLU_RS08320	0.60	+1.4
1,862,313	-		PFLU_RS08320	0.60	+1.6
1,862,313	-		PFLU_RS08320	0.60	+0.3
1,862,393	+		PFLU_RS08320	0.64	-0.4
1,862,527	+		PFLU_RS08320	0.72	+0.2
1,862,527	+		PFLU_RS08320	0.72	-0.5
1,862,527	+		PFLU_RS08320	0.72	+0.7
1,862,527	+		PFLU_RS08320	0.72	+0.6
1,862,527	+		PFLU_RS08320	0.72	-0.3
1,862,527	+		PFLU_RS08320	0.72	+0.6
1,862,527	+		PFLU_RS08320	0.72	+1.1
1,862,528	-		PFLU_RS08320	0.72	-2.1
1,862,528	-		PFLU_RS08320	0.72	+0.5
1,862,528	-		PFLU_RS08320	0.72	+1.0
1,862,528	-		PFLU_RS08320	0.72	+0.4
1,862,529	+		PFLU_RS08320	0.72	+0.2
1,862,529	+		PFLU_RS08320	0.72	-0.4
1,862,529	+		PFLU_RS08320	0.72	-0.4
1,862,529	+		PFLU_RS08320	0.72	+0.7
1,862,530	-		PFLU_RS08320	0.72	+1.9
1,862,530	-		PFLU_RS08320	0.72	+0.7
1,862,530	-		PFLU_RS08320	0.72	-0.7
1,862,530	-		PFLU_RS08320	0.72	-1.4
1,862,550	+		PFLU_RS08320	0.73	-0.3
1,862,590	+		PFLU_RS08320	0.76	-0.2
1,862,590	+		PFLU_RS08320	0.76	+1.0
1,862,590	+		PFLU_RS08320	0.76	-0.6
1,862,590	+		PFLU_RS08320	0.76	-0.6
1,862,590	+		PFLU_RS08320	0.76	-1.9
1,862,591	-		PFLU_RS08320	0.76	-0.1
1,862,591	-		PFLU_RS08320	0.76	+0.8
1,862,591	-		PFLU_RS08320	0.76	+1.0
1,862,591	-		PFLU_RS08320	0.76	-2.1
1,862,591	-		PFLU_RS08320	0.76	-0.3
1,862,591	-		PFLU_RS08320	0.76	+0.6
1,862,622	-		PFLU_RS08320	0.78	-0.7
1,862,622	-		PFLU_RS08320	0.78	+0.3
1,862,623	+		PFLU_RS08320	0.78	-1.8
1,862,623	+		PFLU_RS08320	0.78	+1.6
1,862,623	+		PFLU_RS08320	0.78	+0.8
1,862,623	+		PFLU_RS08320	0.78	-0.1
1,862,623	+		PFLU_RS08320	0.78	-0.6
1,862,624	-		PFLU_RS08320	0.78	+0.2
1,862,624	-		PFLU_RS08320	0.78	-0.6
1,862,624	-		PFLU_RS08320	0.78	-0.1
1,862,624	-		PFLU_RS08320	0.78	-1.1
1,862,624	-		PFLU_RS08320	0.78	+0.5
1,862,624	-		PFLU_RS08320	0.78	-0.8
1,862,673	+		PFLU_RS08320	0.80	-0.3
1,862,673	+		PFLU_RS08320	0.80	+1.5
1,862,673	+		PFLU_RS08320	0.80	+0.9
1,862,790	+		PFLU_RS08320	0.87	-0.1
1,862,823	+		PFLU_RS08320	0.89	+0.2
1,862,823	+		PFLU_RS08320	0.89	-0.5
1,862,824	-		PFLU_RS08320	0.89	+0.0
1,862,826	+		PFLU_RS08320	0.89	+0.7
1,862,828	+		PFLU_RS08320	0.89	+0.8
1,862,828	+		PFLU_RS08320	0.89	-0.5
1,862,828	+		PFLU_RS08320	0.89	+0.8
1,862,829	-		PFLU_RS08320	0.89	-0.7
1,862,858	+				+0.0
1,862,930	-				-1.7
1,862,934	-				-0.4
1,862,948	-				-0.4
1,862,971	+				+2.6
1,862,978	-				-0.1
1,863,040	-				+0.8
1,863,077	+				-0.1
1,863,093	+				+0.7
1,863,093	+				+1.5
1,863,094	-				-1.8
1,863,098	+				+0.1
1,863,164	+		PFLU_RS08325	0.19	-0.2
1,863,165	-		PFLU_RS08325	0.19	-0.2
1,863,182	+		PFLU_RS08325	0.21	+0.7
1,863,184	+		PFLU_RS08325	0.22	+0.2
1,863,185	-		PFLU_RS08325	0.22	+1.7
1,863,185	-		PFLU_RS08325	0.22	-1.9
1,863,185	-		PFLU_RS08325	0.22	+1.0
1,863,281	+		PFLU_RS08325	0.35	+0.0
1,863,281	+		PFLU_RS08325	0.35	+0.7
1,863,281	+		PFLU_RS08325	0.35	-0.1
1,863,281	+		PFLU_RS08325	0.35	+1.0
1,863,281	+		PFLU_RS08325	0.35	+1.1
1,863,281	+		PFLU_RS08325	0.35	-2.2
1,863,281	+		PFLU_RS08325	0.35	+1.8
1,863,281	+		PFLU_RS08325	0.35	+0.3
1,863,282	-		PFLU_RS08325	0.35	+0.5
1,863,282	-		PFLU_RS08325	0.35	-3.1
1,863,282	-		PFLU_RS08325	0.35	+0.0
1,863,282	-		PFLU_RS08325	0.35	+0.3
1,863,282	-		PFLU_RS08325	0.35	-0.2
1,863,296	-		PFLU_RS08325	0.37	-2.5
1,863,296	-		PFLU_RS08325	0.37	+2.7
1,863,296	-		PFLU_RS08325	0.37	+0.5
1,863,316	-		PFLU_RS08325	0.40	+1.3
1,863,384	+		PFLU_RS08325	0.49	+1.2
1,863,384	+		PFLU_RS08325	0.49	+0.4
1,863,384	+		PFLU_RS08325	0.49	-2.5
1,863,384	+		PFLU_RS08325	0.49	+1.5
1,863,384	+		PFLU_RS08325	0.49	-0.4
1,863,384	+		PFLU_RS08325	0.49	-0.7
1,863,384	+		PFLU_RS08325	0.49	+2.1
1,863,385	-		PFLU_RS08325	0.49	-0.9
1,863,385	-		PFLU_RS08325	0.49	-1.7
1,863,385	-		PFLU_RS08325	0.49	+0.9
1,863,385	-		PFLU_RS08325	0.49	+0.4
1,863,395	-		PFLU_RS08325	0.51	+0.8
1,863,508	-		PFLU_RS08325	0.66	+1.0
1,863,536	+		PFLU_RS08325	0.70	+1.0
1,863,536	+		PFLU_RS08325	0.70	-0.6
1,863,536	+		PFLU_RS08325	0.70	+0.6
1,863,536	+		PFLU_RS08325	0.70	-1.0
1,863,536	+		PFLU_RS08325	0.70	+1.5
1,863,536	+		PFLU_RS08325	0.70	+0.5
1,863,536	+		PFLU_RS08325	0.70	-0.6
1,863,536	+		PFLU_RS08325	0.70	+1.1
1,863,536	+		PFLU_RS08325	0.70	-0.1
1,863,536	+		PFLU_RS08325	0.70	+0.2
1,863,536	+		PFLU_RS08325	0.70	-0.2
1,863,536	+		PFLU_RS08325	0.70	+1.0
1,863,536	+		PFLU_RS08325	0.70	+1.0
1,863,537	-		PFLU_RS08325	0.70	-0.2
1,863,537	-		PFLU_RS08325	0.70	+0.7
1,863,537	-		PFLU_RS08325	0.70	+0.3
1,863,537	-		PFLU_RS08325	0.70	+0.4
1,863,537	-		PFLU_RS08325	0.70	-0.3
1,863,537	-		PFLU_RS08325	0.70	-0.8
1,863,570	+		PFLU_RS08325	0.75	+0.2
1,863,570	+		PFLU_RS08325	0.75	+0.3
1,863,570	+		PFLU_RS08325	0.75	-0.5
1,863,571	-		PFLU_RS08325	0.75	-2.1
1,863,571	-		PFLU_RS08325	0.75	-0.4
1,863,571	-		PFLU_RS08325	0.75	+0.5
1,863,571	-		PFLU_RS08325	0.75	+0.7
1,863,571	-		PFLU_RS08325	0.75	-0.9
1,863,635	+		PFLU_RS08325	0.84	+0.8
1,863,635	+		PFLU_RS08325	0.84	-2.1
1,863,635	+		PFLU_RS08325	0.84	+0.8
1,863,635	+		PFLU_RS08325	0.84	+1.2
1,863,635	+		PFLU_RS08325	0.84	+1.7
1,863,635	+		PFLU_RS08325	0.84	+0.6
1,863,635	+		PFLU_RS08325	0.84	-0.2
1,863,635	+		PFLU_RS08325	0.84	+0.2
1,863,635	+		PFLU_RS08325	0.84	+1.2
1,863,635	+		PFLU_RS08325	0.84	+1.0
1,863,635	+		PFLU_RS08325	0.84	+0.6
1,863,636	-		PFLU_RS08325	0.84	-0.1
1,863,636	-		PFLU_RS08325	0.84	-2.6
1,863,636	-		PFLU_RS08325	0.84	+1.3
1,863,636	-		PFLU_RS08325	0.84	+0.2
1,863,636	-		PFLU_RS08325	0.84	+0.1
1,863,636	-		PFLU_RS08325	0.84	+1.4
1,863,636	-		PFLU_RS08325	0.84	-0.2
1,863,636	-		PFLU_RS08325	0.84	-0.4
1,863,636	-		PFLU_RS08325	0.84	+1.3
1,863,636	-		PFLU_RS08325	0.84	+0.9
1,863,636	-		PFLU_RS08325	0.84	+0.2
1,863,636	-		PFLU_RS08325	0.84	+1.0
1,863,636	-		PFLU_RS08325	0.84	-0.2
1,863,636	-		PFLU_RS08325	0.84	-0.2
1,863,639	+		PFLU_RS08325	0.84	+0.1
1,863,639	+		PFLU_RS08325	0.84	-0.5
1,863,639	+		PFLU_RS08325	0.84	+0.5
1,863,639	+		PFLU_RS08325	0.84	+0.2
1,863,639	+		PFLU_RS08325	0.84	+0.6
1,863,639	+		PFLU_RS08325	0.84	-1.2
1,863,639	+		PFLU_RS08325	0.84	+0.3
1,863,639	+		PFLU_RS08325	0.84	-0.5
1,863,639	+		PFLU_RS08325	0.84	-0.2
1,863,639	+		PFLU_RS08325	0.84	+0.6
1,863,639	+		PFLU_RS08325	0.84	+1.1
1,863,639	+		PFLU_RS08325	0.84	+1.3
1,863,639	+		PFLU_RS08325	0.84	-0.5
1,863,639	+		PFLU_RS08325	0.84	+0.1
1,863,639	+		PFLU_RS08325	0.84	+0.3
1,863,639	+		PFLU_RS08325	0.84	+1.1
1,863,639	+		PFLU_RS08325	0.84	-2.5
1,863,639	+		PFLU_RS08325	0.84	+0.3
1,863,639	+		PFLU_RS08325	0.84	+1.0
1,863,639	+		PFLU_RS08325	0.84	-1.4
1,863,640	-		PFLU_RS08325	0.85	-0.6
1,863,640	-		PFLU_RS08325	0.85	-0.1
1,863,640	-		PFLU_RS08325	0.85	+1.5
1,863,640	-		PFLU_RS08325	0.85	+0.0
1,863,640	-		PFLU_RS08325	0.85	+2.0
1,863,640	-		PFLU_RS08325	0.85	+1.6
1,863,640	-		PFLU_RS08325	0.85	+1.4
1,863,640	-		PFLU_RS08325	0.85	+2.5
1,863,640	-		PFLU_RS08325	0.85	+1.0
1,863,640	-		PFLU_RS08325	0.85	+0.1
1,863,640	-		PFLU_RS08325	0.85	+0.8
1,863,640	-		PFLU_RS08325	0.85	-1.4
1,863,640	-		PFLU_RS08325	0.85	-1.3
1,863,640	-		PFLU_RS08325	0.85	-1.0
1,863,687	+				+1.8
1,863,687	+				+1.6
1,863,687	+				-0.8
1,863,687	+				+0.3
1,863,687	+				-0.9
1,863,687	+				+1.9
1,863,687	+				+0.3
1,863,687	+				+0.1
1,863,687	+				+0.1
1,863,687	+				+0.8
1,863,687	+				+2.2
1,863,688	-				-0.5
1,863,688	-				-1.1
1,863,688	-				+0.9
1,863,688	-				+1.2
1,863,688	-				-0.5
1,863,688	-				-1.9
1,863,688	-				+1.7
1,863,688	-				-0.6
1,863,688	-				-0.1
1,863,688	-				+0.1
1,863,688	-				+0.3
1,863,688	-				-0.1
1,863,688	-				-0.8
1,863,688	-				+0.6
1,863,688	-				+1.1
1,863,688	-				-0.3
1,863,688	-				+1.7
1,863,688	-				-0.3
1,863,688	-				-2.7
1,863,688	-				-0.0
1,863,691	+				+0.7
1,863,691	+				+1.5
1,863,691	+				-0.3
1,863,691	+				-0.0
1,863,691	+				+1.2
1,863,691	+				-0.7
1,863,691	+				+1.0
1,863,691	+				+1.2
1,863,691	+				+0.2
1,863,691	+				+1.8
1,863,691	+				-1.2
1,863,691	+				+0.3
1,863,692	-				+0.2
1,863,692	-				-0.1
1,863,692	-				+1.6
1,863,692	-				+0.1
1,863,692	-				+1.7
1,863,692	-				-0.2
1,863,692	-				-0.6
1,863,692	-				+0.9
1,863,692	-				-3.0
1,863,692	-				+0.6
1,863,692	-				-1.3
1,863,692	-				-1.4
1,863,692	-				+1.8
1,863,692	-				+0.1
1,863,692	-				-3.6
1,863,692	-				+1.2
1,863,692	-				+1.0
1,863,692	-				+1.2
1,863,692	-				-1.0
1,863,708	+				+0.0
1,863,708	+				-2.6
1,863,708	+				-0.3
1,863,708	+				+0.3
1,863,708	+				+0.8
1,863,709	-				-1.0
1,863,709	-				-0.3
1,863,709	-				+0.2
1,863,743	+				+1.4
1,863,743	+				+0.6
1,863,743	+				-0.2
1,863,743	+				+0.5
1,863,743	+				+0.5
1,863,743	+				+0.9
1,863,744	-				-0.1
1,863,863	+		PFLU_RS08330	0.12	+0.1
1,863,863	+		PFLU_RS08330	0.12	+2.0
1,863,863	+		PFLU_RS08330	0.12	+0.1
1,863,863	+		PFLU_RS08330	0.12	-1.5
1,863,863	+		PFLU_RS08330	0.12	-0.2
1,863,863	+		PFLU_RS08330	0.12	-0.5
1,863,863	+		PFLU_RS08330	0.12	-1.4
1,863,863	+		PFLU_RS08330	0.12	+0.1
1,863,863	+		PFLU_RS08330	0.12	-0.5
1,863,863	+		PFLU_RS08330	0.12	-0.2
1,863,863	+		PFLU_RS08330	0.12	+0.2
1,863,863	+		PFLU_RS08330	0.12	-0.3
1,863,864	-		PFLU_RS08330	0.13	+0.7
1,863,864	-		PFLU_RS08330	0.13	+0.7
1,863,864	-		PFLU_RS08330	0.13	-2.1
1,863,864	-		PFLU_RS08330	0.13	-2.3
1,863,864	-		PFLU_RS08330	0.13	+0.5
1,863,864	-		PFLU_RS08330	0.13	+0.1
1,863,935	-		PFLU_RS08330	0.20	-0.2
1,863,961	+		PFLU_RS08330	0.23	+0.4
1,863,962	-		PFLU_RS08330	0.23	-0.2
1,864,021	+		PFLU_RS08330	0.29	+1.9
1,864,021	+		PFLU_RS08330	0.29	+1.8
1,864,021	+		PFLU_RS08330	0.29	+1.4
1,864,021	+		PFLU_RS08330	0.29	-1.1
1,864,021	+		PFLU_RS08330	0.29	+0.1
1,864,022	-		PFLU_RS08330	0.30	-1.2
1,864,022	-		PFLU_RS08330	0.30	-1.6
1,864,022	-		PFLU_RS08330	0.30	-0.1
1,864,022	-		PFLU_RS08330	0.30	-0.0
1,864,022	-		PFLU_RS08330	0.30	+0.3
1,864,022	-		PFLU_RS08330	0.30	-2.3
1,864,022	-		PFLU_RS08330	0.30	+0.3
1,864,167	+		PFLU_RS08330	0.45	+0.4
1,864,167	+		PFLU_RS08330	0.45	+0.8
1,864,167	+		PFLU_RS08330	0.45	+0.6
1,864,167	+		PFLU_RS08330	0.45	+1.5
1,864,167	+		PFLU_RS08330	0.45	+0.2
1,864,167	+		PFLU_RS08330	0.45	+0.7
1,864,167	+		PFLU_RS08330	0.45	-0.0
1,864,167	+		PFLU_RS08330	0.45	+0.8
1,864,167	+		PFLU_RS08330	0.45	+0.5
1,864,167	+		PFLU_RS08330	0.45	+0.4
1,864,168	-		PFLU_RS08330	0.45	+1.0
1,864,168	-		PFLU_RS08330	0.45	-0.9
1,864,168	-		PFLU_RS08330	0.45	-0.6
1,864,168	-		PFLU_RS08330	0.45	+0.9
1,864,168	-		PFLU_RS08330	0.45	+0.5
1,864,168	-		PFLU_RS08330	0.45	-0.1
1,864,168	-		PFLU_RS08330	0.45	-0.5
1,864,168	-		PFLU_RS08330	0.45	+0.2
1,864,168	-		PFLU_RS08330	0.45	+2.8
1,864,213	+		PFLU_RS08330	0.50	+0.9
1,864,213	+		PFLU_RS08330	0.50	-1.1
1,864,213	+		PFLU_RS08330	0.50	+1.2
1,864,213	+		PFLU_RS08330	0.50	+1.0
1,864,214	-		PFLU_RS08330	0.50	+0.2
1,864,465	-		PFLU_RS08330	0.77	-0.5
1,864,465	-		PFLU_RS08330	0.77	+0.1
1,864,497	+		PFLU_RS08330	0.81	-0.6
1,864,497	+		PFLU_RS08330	0.81	+0.8
1,864,498	-		PFLU_RS08330	0.81	+0.1
1,864,498	-		PFLU_RS08330	0.81	+0.9
1,864,501	+		PFLU_RS08330	0.81	-0.6
1,864,501	+		PFLU_RS08330	0.81	-0.0
1,864,501	+		PFLU_RS08330	0.81	+0.0
1,864,501	+		PFLU_RS08330	0.81	-0.1
1,864,502	-		PFLU_RS08330	0.81	+1.9
1,864,502	-		PFLU_RS08330	0.81	-0.8
1,864,502	-		PFLU_RS08330	0.81	+0.2
1,864,502	-		PFLU_RS08330	0.81	+0.5
1,864,502	-		PFLU_RS08330	0.81	+0.2
1,864,504	-		PFLU_RS08330	0.82	-0.5
1,864,535	-		PFLU_RS08330	0.85	-0.9
1,864,537	+		PFLU_RS08330	0.85	-1.3
1,864,537	+		PFLU_RS08330	0.85	+2.2
1,864,537	+		PFLU_RS08330	0.85	-0.5
1,864,538	-		PFLU_RS08330	0.85	+0.5
1,864,538	-		PFLU_RS08330	0.85	+1.2
1,864,538	-		PFLU_RS08330	0.85	+0.9
1,864,538	-		PFLU_RS08330	0.85	-0.2
1,864,564	-		PFLU_RS08330	0.88	-1.1
1,864,627	+				+1.1
1,864,628	-				+1.4
1,864,703	+				-0.3
1,864,703	+				-2.2