Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06840

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,531,954	+		PFLU_RS06830	0.83	+1.1
1,531,988	+		PFLU_RS06830	0.86	+0.4
1,531,988	+		PFLU_RS06830	0.86	+0.6
1,531,988	+		PFLU_RS06830	0.86	+0.2
1,531,988	+		PFLU_RS06830	0.86	+2.7
1,531,988	+		PFLU_RS06830	0.86	-1.5
1,531,989	-		PFLU_RS06830	0.86	+0.5
1,531,989	-		PFLU_RS06830	0.86	+0.8
1,531,989	-		PFLU_RS06830	0.86	-1.0
1,531,989	-		PFLU_RS06830	0.86	+0.2
1,531,989	-		PFLU_RS06830	0.86	+0.0
1,531,989	-		PFLU_RS06830	0.86	+0.8
1,532,026	+		PFLU_RS06830	0.88	-0.8
1,532,026	+		PFLU_RS06830	0.88	+0.2
1,532,026	+		PFLU_RS06830	0.88	+0.5
1,532,027	-		PFLU_RS06830	0.88	+1.7
1,532,032	+		PFLU_RS06830	0.89	-0.0
1,532,063	-				-1.6
1,532,075	+				+0.2
1,532,075	+				-0.0
1,532,075	+				-0.1
1,532,075	+				+2.4
1,532,075	+				+0.7
1,532,075	+				+0.8
1,532,075	+				+1.7
1,532,075	+				-1.2
1,532,075	+				-0.1
1,532,076	-				-0.7
1,532,076	-				+0.2
1,532,076	-				-1.4
1,532,076	-				-2.4
1,532,076	-				-0.7
1,532,078	+				-0.3
1,532,078	+				+0.6
1,532,078	+				+0.1
1,532,078	+				+1.1
1,532,078	+				-2.4
1,532,078	+				-0.4
1,532,079	-				-0.7
1,532,079	-				+0.8
1,532,079	-				-2.2
1,532,079	-				-2.5
1,532,079	-				-0.8
1,532,160	+				+0.5
1,532,160	+				-2.6
1,532,160	+				+0.8
1,532,161	-				-2.1
1,532,161	-				-2.1
1,532,162	+				+0.4
1,532,163	-				+0.4
1,532,163	-				+1.6
1,532,218	+				-0.4
1,532,218	+				-1.1
1,532,218	+				-0.1
1,532,218	+				-2.1
1,532,219	-				-2.1
1,532,219	-				-2.9
1,532,219	-				+0.1
1,532,219	-				+0.6
1,532,219	-				+0.5
1,532,219	-				-0.8
1,532,219	-				+0.1
1,532,238	+				-1.7
1,532,238	+				+0.6
1,532,248	+				-1.8
1,532,314	-		PFLU_RS06835	0.20	+0.1
1,532,323	+		PFLU_RS06835	0.22	+0.1
1,532,323	+		PFLU_RS06835	0.22	-0.5
1,532,323	+		PFLU_RS06835	0.22	+1.1
1,532,323	+		PFLU_RS06835	0.22	+2.1
1,532,323	+		PFLU_RS06835	0.22	+0.6
1,532,323	+		PFLU_RS06835	0.22	-0.3
1,532,323	+		PFLU_RS06835	0.22	+0.7
1,532,323	+		PFLU_RS06835	0.22	+1.2
1,532,323	+		PFLU_RS06835	0.22	+1.7
1,532,323	+		PFLU_RS06835	0.22	+1.1
1,532,324	-		PFLU_RS06835	0.22	+1.1
1,532,324	-		PFLU_RS06835	0.22	-2.2
1,532,324	-		PFLU_RS06835	0.22	+0.3
1,532,324	-		PFLU_RS06835	0.22	-0.1
1,532,324	-		PFLU_RS06835	0.22	+1.0
1,532,324	-		PFLU_RS06835	0.22	-1.1
1,532,324	-		PFLU_RS06835	0.22	+0.9
1,532,380	+		PFLU_RS06835	0.31	+0.6
1,532,380	+		PFLU_RS06835	0.31	-0.4
1,532,381	-		PFLU_RS06835	0.31	-0.5
1,532,382	+		PFLU_RS06835	0.32	-2.8
1,532,429	+		PFLU_RS06835	0.40	-1.5
1,532,540	-		PFLU_RS06835	0.58	+0.1
1,532,653	+		PFLU_RS06835	0.77	+2.1
1,532,653	+		PFLU_RS06835	0.77	+1.3
1,532,653	+		PFLU_RS06835	0.77	-0.8
1,532,653	+		PFLU_RS06835	0.77	-3.1
1,532,653	+		PFLU_RS06835	0.77	-3.1
1,532,653	+		PFLU_RS06835	0.77	-0.7
1,532,653	+		PFLU_RS06835	0.77	+0.3
1,532,653	+		PFLU_RS06835	0.77	+0.3
1,532,653	+		PFLU_RS06835	0.77	+0.5
1,532,653	+		PFLU_RS06835	0.77	-1.3
1,532,653	+		PFLU_RS06835	0.77	-2.0
1,532,653	+		PFLU_RS06835	0.77	-1.2
1,532,653	+		PFLU_RS06835	0.77	-0.8
1,532,653	+		PFLU_RS06835	0.77	+1.4
1,532,653	+		PFLU_RS06835	0.77	-0.7
1,532,653	+		PFLU_RS06835	0.77	+0.5
1,532,653	+		PFLU_RS06835	0.77	-0.6
1,532,653	+		PFLU_RS06835	0.77	-0.2
1,532,654	-		PFLU_RS06835	0.77	-1.7
1,532,654	-		PFLU_RS06835	0.77	+1.3
1,532,654	-		PFLU_RS06835	0.77	-3.0
1,532,654	-		PFLU_RS06835	0.77	+0.4
1,532,654	-		PFLU_RS06835	0.77	+0.0
1,532,654	-		PFLU_RS06835	0.77	+0.6
1,532,654	-		PFLU_RS06835	0.77	+0.4
1,532,654	-		PFLU_RS06835	0.77	-0.8
1,532,654	-		PFLU_RS06835	0.77	+0.5
1,532,654	-		PFLU_RS06835	0.77	-0.7
1,532,654	-		PFLU_RS06835	0.77	+1.0
1,532,654	-		PFLU_RS06835	0.77	-0.4
1,532,654	-		PFLU_RS06835	0.77	-2.5
1,532,654	-		PFLU_RS06835	0.77	-0.7
1,532,680	+		PFLU_RS06835	0.82	-0.2
1,532,742	-				-0.8
1,532,742	-				+2.7
1,532,756	+				+0.3
1,532,756	+				+0.5
1,532,757	-				-0.5
1,532,757	-				+1.1
1,532,757	-				+1.1
1,532,832	-				-1.5
1,532,832	-				+0.6
1,532,832	-				+0.4
1,532,832	-				-0.0
1,532,832	-				+0.0
1,532,832	-				-0.8
1,532,832	-				-1.7
1,532,832	-				+0.2
1,532,832	-				-0.8
1,532,832	-				-0.1
1,532,836	+				+0.3
1,532,836	+				-0.6
1,532,837	-				+1.2
1,532,837	-				-0.8
1,532,852	+				-1.0
1,532,852	+				+0.8
1,532,852	+				-1.8
1,532,852	+				-2.3
1,532,852	+				+0.2
1,532,853	-				+1.0
1,532,853	-				-1.1
1,532,853	-				-0.8
1,532,853	-				-1.0
1,532,853	-				+0.4
1,532,853	-				-1.8
1,532,853	-				-3.6
1,532,883	+				-1.0
1,532,883	+				+0.6
1,532,883	+				+0.6
1,532,884	-				+0.3
1,532,887	+				-1.3
1,532,887	+				+0.2
1,532,887	+				-0.9
1,532,887	+				+1.6
1,532,887	+				+0.9
1,532,887	+				-0.3
1,532,887	+				-0.9
1,532,887	+				-2.5
1,532,887	+				-0.1
1,532,888	-				-0.3
1,532,888	-				-1.5
1,532,888	-				+1.7
1,532,888	-				+0.5
1,532,891	+				-0.1
1,532,891	+				+0.6
1,532,891	+				+0.7
1,532,891	+				-0.3
1,532,891	+				+0.1
1,532,892	-				+0.4
1,532,892	-				-2.0
1,532,892	-				+1.8
1,532,892	-				+1.3
1,532,893	+				+1.2
1,532,893	+				+0.9
1,532,893	+				-0.8
1,532,894	-				-0.1
1,532,919	+				-0.7
1,532,999	-		PFLU_RS06840	0.16	+0.3
1,533,021	-		PFLU_RS06840	0.19	-0.0
1,533,029	+		PFLU_RS06840	0.20	-0.2
1,533,029	+		PFLU_RS06840	0.20	-0.6
1,533,029	+		PFLU_RS06840	0.20	-0.8
1,533,029	+		PFLU_RS06840	0.20	+1.4
1,533,029	+		PFLU_RS06840	0.20	-1.5
1,533,029	+		PFLU_RS06840	0.20	+1.0
1,533,030	-		PFLU_RS06840	0.20	-1.8
1,533,030	-		PFLU_RS06840	0.20	-1.6
1,533,089	+		PFLU_RS06840	0.28	-1.1
1,533,089	+		PFLU_RS06840	0.28	+0.8
1,533,089	+		PFLU_RS06840	0.28	+0.6
1,533,090	-		PFLU_RS06840	0.28	-1.4
1,533,090	-		PFLU_RS06840	0.28	+0.9
1,533,090	-		PFLU_RS06840	0.28	-0.6
1,533,217	+		PFLU_RS06840	0.45	-1.1
1,533,218	-		PFLU_RS06840	0.45	-1.0
1,533,218	-		PFLU_RS06840	0.45	-0.1
1,533,249	-		PFLU_RS06840	0.49	+0.2
1,533,255	+		PFLU_RS06840	0.50	-3.3
1,533,256	-		PFLU_RS06840	0.50	+1.7
1,533,256	-		PFLU_RS06840	0.50	-0.3
1,533,256	-		PFLU_RS06840	0.50	+1.7
1,533,256	-		PFLU_RS06840	0.50	-1.1
1,533,258	+		PFLU_RS06840	0.50	+0.8
1,533,258	+		PFLU_RS06840	0.50	-0.1
1,533,258	+		PFLU_RS06840	0.50	+0.8
1,533,258	+		PFLU_RS06840	0.50	+1.1
1,533,259	-		PFLU_RS06840	0.50	-0.1
1,533,259	-		PFLU_RS06840	0.50	-0.5
1,533,271	+		PFLU_RS06840	0.52	+0.6
1,533,271	+		PFLU_RS06840	0.52	+1.7
1,533,272	-		PFLU_RS06840	0.52	+1.5
1,533,331	+		PFLU_RS06840	0.60	-0.5
1,533,379	+		PFLU_RS06840	0.66	-0.8
1,533,379	+		PFLU_RS06840	0.66	-2.4
1,533,379	+		PFLU_RS06840	0.66	+0.4
1,533,379	+		PFLU_RS06840	0.66	+0.6
1,533,379	+		PFLU_RS06840	0.66	+1.0
1,533,379	+		PFLU_RS06840	0.66	-0.6
1,533,379	+		PFLU_RS06840	0.66	-1.0
1,533,379	+		PFLU_RS06840	0.66	+0.7
1,533,380	-		PFLU_RS06840	0.66	+0.6
1,533,380	-		PFLU_RS06840	0.66	-0.8
1,533,380	-		PFLU_RS06840	0.66	+1.5
1,533,380	-		PFLU_RS06840	0.66	+0.5
1,533,380	-		PFLU_RS06840	0.66	-1.1
1,533,396	+		PFLU_RS06840	0.68	+1.1
1,533,396	+		PFLU_RS06840	0.68	+0.5
1,533,638	+				-0.8
1,533,638	+				-1.5
1,533,639	-				-0.8
1,533,639	-				+0.9
1,533,639	-				+0.9
1,533,729	+				+1.8
1,533,729	+				+0.4
1,533,729	+				+0.8
1,533,729	+				+0.8
1,533,729	+				+1.3
1,533,730	-				+0.0
1,533,730	-				-3.1
1,533,730	-				-2.8
1,533,761	+				+0.2
1,533,761	+				+2.4
1,533,762	-				+0.6
1,533,762	-				-0.2
1,533,762	-				+0.8
1,533,762	-				-0.2
1,533,762	-				-0.1
1,533,782	+				+0.9
1,533,782	+				+0.8
1,533,783	-				-0.5
1,533,783	-				-1.1
1,533,783	-				+1.4
1,533,789	+				-1.3
1,533,790	-				+0.1
1,533,888	+		PFLU_RS06845	0.15	+0.5
1,533,889	-		PFLU_RS06845	0.15	+0.1
1,533,944	+		PFLU_RS06845	0.20	+1.5
1,533,944	+		PFLU_RS06845	0.20	-0.2
1,533,944	+		PFLU_RS06845	0.20	-0.4
1,533,945	-		PFLU_RS06845	0.20	-0.5
1,533,945	-		PFLU_RS06845	0.20	-0.0
1,533,945	-		PFLU_RS06845	0.20	-1.3
1,533,945	-		PFLU_RS06845	0.20	+0.1
1,533,945	-		PFLU_RS06845	0.20	-1.0
1,533,945	-		PFLU_RS06845	0.20	-0.2
1,534,052	+		PFLU_RS06845	0.30	+0.9
1,534,052	+		PFLU_RS06845	0.30	-2.3
1,534,052	+		PFLU_RS06845	0.30	+0.2
1,534,052	+		PFLU_RS06845	0.30	-0.9
1,534,053	-		PFLU_RS06845	0.30	+0.7
1,534,053	-		PFLU_RS06845	0.30	+0.4
1,534,053	-		PFLU_RS06845	0.30	+0.8
1,534,053	-		PFLU_RS06845	0.30	+2.4
1,534,053	-		PFLU_RS06845	0.30	-0.6
1,534,053	-		PFLU_RS06845	0.30	+0.1
1,534,053	-		PFLU_RS06845	0.30	+0.5
1,534,053	-		PFLU_RS06845	0.30	+0.4
1,534,221	+		PFLU_RS06845	0.46	+0.1
1,534,221	+		PFLU_RS06845	0.46	+0.1
1,534,222	-		PFLU_RS06845	0.46	+0.3
1,534,222	-		PFLU_RS06845	0.46	-1.9
1,534,257	-		PFLU_RS06845	0.50	-0.1
1,534,460	+		PFLU_RS06845	0.69	+1.0