Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS06120

Experiment: L-Arabinose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C); with MOPS
1,368,803	+		PFLU_RS06110	0.43	-0.2
1,368,803	+		PFLU_RS06110	0.43	+0.4
1,368,804	-		PFLU_RS06110	0.44	-0.1
1,368,878	-		PFLU_RS06110	0.82	+0.9
1,368,878	-		PFLU_RS06110	0.82	-0.0
1,368,878	-		PFLU_RS06110	0.82	-0.2
1,368,926	+				-0.3
1,368,926	+				-2.2
1,368,926	+				+1.2
1,368,926	+				-0.2
1,368,926	+				+1.8
1,368,926	+				-1.7
1,368,926	+				+0.5
1,368,926	+				+0.6
1,368,926	+				-0.3
1,368,927	-				+1.0
1,368,927	-				+1.1
1,368,927	-				+1.3
1,368,927	-				-2.7
1,368,927	-				-0.5
1,368,928	+				+0.2
1,368,928	+				+1.1
1,368,928	+				-0.7
1,368,928	+				+1.0
1,368,929	-				-1.9
1,368,929	-				+0.9
1,368,929	-				+0.4
1,368,929	-				-0.8
1,368,948	+				-0.2
1,368,948	+				+1.7
1,368,948	+				+0.2
1,368,948	+				-0.2
1,368,948	+				+0.9
1,368,949	-				-1.6
1,369,068	-		PFLU_RS06115	0.16	+0.2
1,369,068	-		PFLU_RS06115	0.16	+0.0
1,369,092	+		PFLU_RS06115	0.19	+1.7
1,369,092	+		PFLU_RS06115	0.19	-0.2
1,369,123	+		PFLU_RS06115	0.23	-0.6
1,369,124	-		PFLU_RS06115	0.23	+0.8
1,369,124	-		PFLU_RS06115	0.23	+0.5
1,369,160	+		PFLU_RS06115	0.28	-2.1
1,369,161	-		PFLU_RS06115	0.28	-0.0
1,369,187	+		PFLU_RS06115	0.31	-1.0
1,369,188	-		PFLU_RS06115	0.31	-0.4
1,369,188	-		PFLU_RS06115	0.31	-1.2
1,369,206	+		PFLU_RS06115	0.33	-2.7
1,369,206	+		PFLU_RS06115	0.33	+0.5
1,369,206	+		PFLU_RS06115	0.33	-0.1
1,369,206	+		PFLU_RS06115	0.33	-0.7
1,369,207	-		PFLU_RS06115	0.34	+0.9
1,369,313	-		PFLU_RS06115	0.47	-0.6
1,369,313	-		PFLU_RS06115	0.47	-2.0
1,369,491	-		PFLU_RS06115	0.70	+0.9
1,369,491	-		PFLU_RS06115	0.70	+0.7
1,369,491	-		PFLU_RS06115	0.70	+0.7
1,369,491	-		PFLU_RS06115	0.70	+0.2
1,369,491	-		PFLU_RS06115	0.70	-1.1
1,369,525	-		PFLU_RS06115	0.74	+1.2
1,369,728	+				+1.4
1,369,728	+				+1.9
1,369,729	-				+0.9
1,369,785	+				+1.6
1,369,785	+				+1.8
1,369,785	+				-0.1
1,369,786	-				-1.8
1,369,823	-				-0.1
1,369,823	-				-1.0
1,369,888	+		PFLU_RS06120	0.24	+0.2
1,369,888	+		PFLU_RS06120	0.24	+0.9
1,369,888	+		PFLU_RS06120	0.24	-0.6
1,369,888	+		PFLU_RS06120	0.24	-0.4
1,369,888	+		PFLU_RS06120	0.24	-0.5
1,369,888	+		PFLU_RS06120	0.24	-0.7
1,369,889	-		PFLU_RS06120	0.25	-1.1
1,369,947	+		PFLU_RS06120	0.38	-0.1
1,369,947	+		PFLU_RS06120	0.38	-3.1
1,369,948	-		PFLU_RS06120	0.38	-0.7
1,369,948	-		PFLU_RS06120	0.38	-1.8
1,369,948	-		PFLU_RS06120	0.38	+0.9
1,369,948	-		PFLU_RS06120	0.38	-0.7
1,369,948	-		PFLU_RS06120	0.38	-0.7
1,370,009	+		PFLU_RS06120	0.53	-0.2
1,370,009	+		PFLU_RS06120	0.53	+0.9
1,370,009	+		PFLU_RS06120	0.53	+2.1
1,370,010	-		PFLU_RS06120	0.53	+1.5
1,370,010	-		PFLU_RS06120	0.53	+0.8
1,370,010	-		PFLU_RS06120	0.53	+0.9
1,370,010	-		PFLU_RS06120	0.53	+1.6
1,370,010	-		PFLU_RS06120	0.53	+0.4
1,370,019	+		PFLU_RS06120	0.55	-1.6
1,370,019	+		PFLU_RS06120	0.55	+0.6
1,370,019	+		PFLU_RS06120	0.55	+1.2
1,370,073	+		PFLU_RS06120	0.68	-1.8
1,370,074	-		PFLU_RS06120	0.68	+0.6
1,370,215	-				+2.2
1,370,232	+				+1.0
1,370,232	+				-0.6
1,370,233	-				-1.7
1,370,233	-				-1.2
1,370,316	+				+0.2
1,370,317	-				-0.7
1,370,460	+				-0.7
1,370,460	+				-0.8
1,370,460	+				+1.0
1,370,481	+				-0.5
1,370,481	+				-0.5
1,370,515	+				+0.7
1,370,515	+				-0.2
1,370,515	+				+0.7
1,370,515	+				+1.4
1,370,515	+				-0.3
1,370,515	+				-0.8
1,370,515	+				+0.3
1,370,515	+				+0.4
1,370,515	+				+0.5
1,370,515	+				-1.0
1,370,515	+				+1.9
1,370,515	+				+0.2
1,370,515	+				+0.6
1,370,515	+				+0.3
1,370,515	+				+0.1
1,370,515	+				-0.0
1,370,515	+				+0.8
1,370,515	+				+1.1
1,370,515	+				-0.6
1,370,515	+				-0.4
1,370,515	+				+1.1
1,370,515	+				+0.4
1,370,515	+				-0.9
1,370,515	+				-0.6
1,370,515	+				+0.4
1,370,515	+				+0.9
1,370,515	+				+0.0
1,370,515	+				+0.1
1,370,515	+				-1.2
1,370,515	+				-2.1
1,370,515	+				-1.2
1,370,515	+				-0.1
1,370,516	-				-1.4
1,370,516	-				-0.2
1,370,516	-				-0.2
1,370,516	-				+0.5
1,370,516	-				-0.1
1,370,516	-				-1.3
1,370,516	-				+0.5
1,370,516	-				-0.2
1,370,516	-				-0.0
1,370,516	-				-1.1
1,370,516	-				-0.0
1,370,516	-				+1.3
1,370,516	-				-0.1
1,370,516	-				-0.2
1,370,516	-				-0.5
1,370,516	-				+1.7
1,370,516	-				-0.2
1,370,516	-				-0.3
1,370,516	-				-2.5
1,370,516	-				+0.4
1,370,516	-				-0.2
1,370,516	-				-0.7
1,370,516	-				-0.4
1,370,526	+		PFLU_RS06125	0.12	-0.9
1,370,557	+		PFLU_RS06125	0.21	+0.2
1,370,558	-		PFLU_RS06125	0.22	+0.3
1,370,558	-		PFLU_RS06125	0.22	+0.1
1,370,574	+		PFLU_RS06125	0.26	-0.1
1,370,574	+		PFLU_RS06125	0.26	+0.3
1,370,574	+		PFLU_RS06125	0.26	-0.4
1,370,574	+		PFLU_RS06125	0.26	-0.2
1,370,574	+		PFLU_RS06125	0.26	-0.1
1,370,574	+		PFLU_RS06125	0.26	-2.5
1,370,574	+		PFLU_RS06125	0.26	-1.1
1,370,574	+		PFLU_RS06125	0.26	+0.5
1,370,575	-		PFLU_RS06125	0.27	+1.0
1,370,575	-		PFLU_RS06125	0.27	+0.3
1,370,625	+		PFLU_RS06125	0.41	+1.6
1,370,625	+		PFLU_RS06125	0.41	+0.7
1,370,626	-		PFLU_RS06125	0.41	-0.2
1,370,626	-		PFLU_RS06125	0.41	-0.5
1,370,626	-		PFLU_RS06125	0.41	+0.3
1,370,626	-		PFLU_RS06125	0.41	-1.8
1,370,704	-		PFLU_RS06125	0.64	-0.9
1,370,760	+		PFLU_RS06125	0.80	+0.8
1,370,839	+				+1.1
1,370,914	+				-1.1
1,370,914	+				-0.4
1,370,914	+				-0.3
1,370,914	+				-1.0
1,370,915	-				-0.6
1,370,915	-				-0.4
1,370,915	-				-0.7
1,370,915	-				+0.1
1,370,915	-				+0.6
1,370,915	-				-0.8
1,370,934	+				+0.4
1,370,934	+				-0.7
1,370,934	+				+1.4
1,370,947	+				-1.0
1,370,948	-				+0.8
1,371,090	+				+0.3
1,371,091	-				-2.7