Strain Fitness in Pseudomonas sp. S08-1

Strain Fitness in Pseudomonas sp. S08-1 around OH686_15520

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	acetate (C)
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3,241,280	+			+0.4
3,241,281	-			-0.3
3,241,281	-			-0.3
3,241,314	-			-1.0
3,241,314	-			-0.8
3,241,314	-			+0.1
3,241,314	-			-0.3
3,241,346	+			-0.8
3,241,346	+			-0.7
3,241,346	+			+1.0
3,241,346	+			+1.1
3,241,354	+			-0.5
3,241,375	+			-0.1
3,241,375	+			+0.3
3,241,375	+			+0.3
3,241,375	+			-0.1
3,241,375	+			-0.4
3,241,375	+			-2.6
3,241,375	+			+0.1
3,241,375	+			-0.1
3,241,375	+			+0.6
3,241,376	-			-0.4
3,241,376	-			+0.6
3,241,376	-			+0.1
3,241,376	-			-0.4
3,241,376	-			-0.3
3,241,376	-			+1.0
3,241,376	-			-0.9
3,241,445	+	OH686_15510	0.32	+0.1
3,241,445	+	OH686_15510	0.32	+0.1
3,241,445	+	OH686_15510	0.32	-0.3
3,241,445	+	OH686_15510	0.32	+0.8
3,241,446	-	OH686_15510	0.32	+0.2
3,241,446	-	OH686_15510	0.32	+0.1
3,241,446	-	OH686_15510	0.32	-0.1
3,241,446	-	OH686_15510	0.32	-0.1
3,241,562	+	OH686_15510	0.88	+0.5
3,241,563	-	OH686_15510	0.88	-0.7
3,241,563	-	OH686_15510	0.88	+0.0
3,241,579	+			-1.3
3,241,585	+			-0.6
3,241,634	+			-0.4
3,241,634	+			-0.3
3,241,634	+			-0.2
3,241,635	-			-0.5
3,241,635	-			-0.3
3,241,635	-			-0.3
3,241,635	-			+0.1
3,241,635	-			-0.3
3,241,635	-			-1.1
3,241,662	+			+0.0
3,241,962	+	OH686_15515	0.67	+1.0
3,241,963	-	OH686_15515	0.67	-0.1
3,241,963	-	OH686_15515	0.67	+1.1
3,241,963	-	OH686_15515	0.67	-0.5
3,241,963	-	OH686_15515	0.67	+0.6
3,242,005	+	OH686_15515	0.79	+0.6
3,242,005	+	OH686_15515	0.79	-2.1
3,242,005	+	OH686_15515	0.79	+0.1
3,242,005	+	OH686_15515	0.79	-0.3
3,242,005	+	OH686_15515	0.79	+0.2
3,242,005	+	OH686_15515	0.79	+0.3
3,242,005	+	OH686_15515	0.79	+1.1
3,242,005	+	OH686_15515	0.79	-0.6
3,242,005	+	OH686_15515	0.79	-0.5
3,242,005	+	OH686_15515	0.79	+0.1
3,242,005	+	OH686_15515	0.79	+0.2
3,242,005	+	OH686_15515	0.79	+0.2
3,242,005	+	OH686_15515	0.79	+0.9
3,242,005	+	OH686_15515	0.79	+0.3
3,242,005	+	OH686_15515	0.79	+0.1
3,242,005	+	OH686_15515	0.79	+0.1
3,242,006	-	OH686_15515	0.79	-0.5
3,242,006	-	OH686_15515	0.79	-2.0
3,242,006	-	OH686_15515	0.79	-0.6
3,242,006	-	OH686_15515	0.79	+0.8
3,242,006	-	OH686_15515	0.79	-0.6
3,242,006	-	OH686_15515	0.79	+0.2
3,242,006	-	OH686_15515	0.79	+0.2
3,242,006	-	OH686_15515	0.79	+0.9
3,242,006	-	OH686_15515	0.79	+0.0
3,242,006	-	OH686_15515	0.79	-1.1
3,242,006	-	OH686_15515	0.79	+0.9
3,242,006	-	OH686_15515	0.79	-1.3
3,242,050	+			-1.4
3,242,050	+			-0.6
3,242,051	-			+0.1
3,242,051	-			-0.3
3,242,051	-			-0.3
3,242,064	+			+0.5
3,242,092	+			+0.7
3,242,092	+			+0.1
3,242,092	+			-0.1
3,242,092	+			+0.4
3,242,092	+			-1.3
3,242,092	+			+0.5
3,242,092	+			+0.3
3,242,092	+			-0.6
3,242,092	+			+0.5
3,242,092	+			-0.3
3,242,092	+			+0.8
3,242,092	+			-0.8
3,242,092	+			-0.2
3,242,092	+			-0.6
3,242,093	-			+0.1
3,242,093	-			+0.7
3,242,093	-			-1.5
3,242,093	-			+0.6
3,242,093	-			+0.3
3,242,093	-			+0.0
3,242,093	-			+0.1
3,242,093	-			+0.2
3,242,093	-			+0.4
3,242,093	-			-0.0
3,242,093	-			-0.3
3,242,094	+			+0.1
3,242,094	+			-1.3
3,242,094	+			-0.4
3,242,094	+			+0.2
3,242,095	-			-0.3
3,242,095	-			+0.2
3,242,095	-			+0.1
3,242,095	-			-0.7
3,242,095	-			-0.6
3,242,095	-			+0.1
3,242,095	-			+0.8
3,242,095	-			+0.0
3,242,095	-			-0.5
3,242,095	-			-0.6
3,242,095	-			-0.4
3,242,095	-			-0.1
3,242,095	-			+0.1
3,242,204	+			+0.1
3,242,204	+			-0.1
3,242,204	+			-0.7
3,242,204	+			+1.1
3,242,204	+			+0.8
3,242,204	+			+0.4
3,242,204	+			-0.3
3,242,205	-			-0.5
3,242,205	-			+0.1
3,242,205	-			+1.1
3,242,205	-			+0.4
3,242,205	-			+0.4
3,242,244	+	OH686_15520	0.11	+0.2
3,242,244	+	OH686_15520	0.11	-0.7
3,242,244	+	OH686_15520	0.11	+0.2
3,242,244	+	OH686_15520	0.11	+0.0
3,242,407	-	OH686_15520	0.23	-0.5
3,242,506	+	OH686_15520	0.30	-0.2
3,242,506	+	OH686_15520	0.30	+0.9
3,242,506	+	OH686_15520	0.30	+1.5
3,242,506	+	OH686_15520	0.30	+0.5
3,242,507	-	OH686_15520	0.30	-0.3
3,242,507	-	OH686_15520	0.30	-0.5
3,242,562	+	OH686_15520	0.34	-0.6
3,242,562	+	OH686_15520	0.34	+0.2
3,242,562	+	OH686_15520	0.34	-0.9
3,242,563	-	OH686_15520	0.34	-0.5
3,242,645	+	OH686_15520	0.40	+0.2
3,242,645	+	OH686_15520	0.40	-0.3
3,242,645	+	OH686_15520	0.40	-0.3
3,242,645	+	OH686_15520	0.40	-0.9
3,242,645	+	OH686_15520	0.40	+1.3
3,242,646	-	OH686_15520	0.40	-0.3
3,242,646	-	OH686_15520	0.40	+0.9
3,242,646	-	OH686_15520	0.40	+0.2
3,242,646	-	OH686_15520	0.40	-0.1
3,242,849	+	OH686_15520	0.55	+0.0
3,242,849	+	OH686_15520	0.55	-1.1
3,242,870	+	OH686_15520	0.57	+0.2
3,242,871	-	OH686_15520	0.57	-0.1
3,243,444	+			-0.2
3,243,449	+			-1.6
3,243,449	+			-0.3
3,243,449	+			-0.3
3,243,449	+			+0.6
3,243,449	+			+0.2
3,243,450	-			+0.0
3,243,450	-			+0.2
3,243,450	-			-0.6
3,243,450	-			-1.4
3,243,450	-			-0.5
3,243,450	-			-0.2
3,243,520	+			-1.6
3,243,520	+			+0.5
3,243,520	+			-0.5
3,243,520	+			-0.1
3,243,520	+			+0.0
3,243,520	+			+0.5
3,243,520	+			-0.0
3,243,520	+			-0.3
3,243,520	+			-0.6
3,243,520	+			-0.2
3,243,520	+			-0.6
3,243,521	-			-0.6
3,243,521	-			-0.5
3,243,586	+			+0.6
3,243,586	+			+0.5
3,243,586	+			-0.5
3,243,587	-			-1.5
3,243,587	-			+0.5
3,243,587	-			+0.1
3,243,587	-			-0.2
3,243,587	-			-0.7
3,243,587	-			+0.7
3,243,587	-			+0.2
3,243,587	-			-0.1
3,243,587	-			-0.7
3,243,587	-			-0.0
3,243,587	-			-0.1
3,243,587	-			+0.2
3,243,592	-			-0.4
3,243,624	+			-2.8
3,243,624	+			+0.1
3,243,625	-			-0.2
3,243,718	-			-1.4
3,243,764	-	OH686_15525	0.12	+0.5
3,243,764	-	OH686_15525	0.12	-0.5
3,243,839	+	OH686_15525	0.19	+1.0
3,243,839	+	OH686_15525	0.19	+0.1
3,243,840	-	OH686_15525	0.19	-0.7
3,244,011	-	OH686_15525	0.34	+0.1

Or see this region's nucleotide sequence