Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_13765 and OH686_13770 are separated by 156 nucleotides OH686_13770 and OH686_13775 are separated by 78 nucleotides OH686_13775 and OH686_13780 are separated by 58 nucleotides
OH686_13765: OH686_13765 - Ammonium transporter, at 2,888,502 to 2,889,752
_13765
OH686_13770: OH686_13770 - UPF0047 protein YjbQ, at 2,889,909 to 2,890,352
_13770
OH686_13775: OH686_13775 - hypothetical protein, at 2,890,431 to 2,890,757
_13775
OH686_13780: OH686_13780 - 2-haloalkanoic acid dehalogenase , at 2,890,816 to 2,891,511
_13780
Position (kb)
2889
2890
2891 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2888.952 kb on + strand, within OH686_13765 at 2888.952 kb on + strand, within OH686_13765 at 2888.953 kb on - strand, within OH686_13765 at 2888.953 kb on - strand, within OH686_13765 at 2888.968 kb on - strand, within OH686_13765 at 2889.099 kb on + strand, within OH686_13765 at 2889.099 kb on + strand, within OH686_13765 at 2889.099 kb on + strand, within OH686_13765 at 2889.099 kb on + strand, within OH686_13765 at 2889.099 kb on + strand, within OH686_13765 at 2889.100 kb on - strand, within OH686_13765 at 2889.100 kb on - strand, within OH686_13765 at 2889.100 kb on - strand, within OH686_13765 at 2889.100 kb on - strand, within OH686_13765 at 2889.100 kb on - strand, within OH686_13765 at 2889.100 kb on - strand, within OH686_13765 at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.690 kb on + strand at 2889.691 kb on - strand at 2889.730 kb on - strand at 2889.872 kb on - strand at 2889.872 kb on - strand at 2889.872 kb on - strand at 2889.872 kb on - strand at 2889.887 kb on + strand at 2889.887 kb on + strand at 2889.887 kb on + strand at 2889.888 kb on - strand at 2889.888 kb on - strand at 2889.888 kb on - strand at 2889.964 kb on + strand, within OH686_13770 at 2889.965 kb on - strand, within OH686_13770 at 2889.965 kb on - strand, within OH686_13770 at 2890.140 kb on + strand, within OH686_13770 at 2890.140 kb on + strand, within OH686_13770 at 2890.140 kb on + strand, within OH686_13770 at 2890.140 kb on + strand, within OH686_13770 at 2890.140 kb on + strand, within OH686_13770 at 2890.141 kb on - strand, within OH686_13770 at 2890.152 kb on + strand, within OH686_13770 at 2890.152 kb on + strand, within OH686_13770 at 2890.152 kb on + strand, within OH686_13770 at 2890.153 kb on - strand, within OH686_13770 at 2890.153 kb on - strand, within OH686_13770 at 2890.153 kb on - strand, within OH686_13770 at 2890.153 kb on - strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.263 kb on + strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.264 kb on - strand, within OH686_13770 at 2890.393 kb on + strand at 2890.393 kb on + strand at 2890.393 kb on + strand at 2890.393 kb on + strand at 2890.393 kb on + strand at 2890.394 kb on - strand at 2890.394 kb on - strand at 2890.394 kb on - strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.395 kb on + strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.396 kb on - strand at 2890.399 kb on + strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.400 kb on - strand at 2890.425 kb on + strand at 2890.425 kb on + strand at 2890.425 kb on + strand at 2890.425 kb on + strand at 2890.425 kb on + strand at 2890.425 kb on + strand at 2890.426 kb on - strand at 2890.426 kb on - strand at 2890.426 kb on - strand at 2890.426 kb on - strand at 2890.426 kb on - strand at 2890.426 kb on - strand at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.609 kb on + strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.610 kb on - strand, within OH686_13775 at 2890.737 kb on + strand at 2890.737 kb on + strand at 2890.977 kb on + strand, within OH686_13780 at 2891.087 kb on + strand, within OH686_13780 at 2891.087 kb on + strand, within OH686_13780 at 2891.087 kb on + strand, within OH686_13780 at 2891.087 kb on + strand, within OH686_13780 at 2891.087 kb on + strand, within OH686_13780 at 2891.088 kb on - strand, within OH686_13780 at 2891.147 kb on + strand, within OH686_13780 at 2891.147 kb on + strand, within OH686_13780 at 2891.148 kb on - strand, within OH686_13780 at 2891.148 kb on - strand, within OH686_13780 at 2891.148 kb on - strand, within OH686_13780 at 2891.267 kb on + strand, within OH686_13780
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 2,888,952 + OH686_13765 0.36 -1.0 2,888,952 + OH686_13765 0.36 +0.4 2,888,953 - OH686_13765 0.36 -0.6 2,888,953 - OH686_13765 0.36 +0.1 2,888,968 - OH686_13765 0.37 -0.6 2,889,099 + OH686_13765 0.48 +0.0 2,889,099 + OH686_13765 0.48 +0.0 2,889,099 + OH686_13765 0.48 +0.4 2,889,099 + OH686_13765 0.48 -0.1 2,889,099 + OH686_13765 0.48 -1.2 2,889,100 - OH686_13765 0.48 +0.8 2,889,100 - OH686_13765 0.48 -0.4 2,889,100 - OH686_13765 0.48 -0.3 2,889,100 - OH686_13765 0.48 +0.0 2,889,100 - OH686_13765 0.48 -0.6 2,889,100 - OH686_13765 0.48 +1.1 2,889,690 + +0.8 2,889,690 + -2.0 2,889,690 + +0.1 2,889,690 + -0.4 2,889,690 + -0.5 2,889,690 + -0.3 2,889,690 + +0.2 2,889,690 + -0.0 2,889,690 + +0.7 2,889,691 - -0.1 2,889,730 - -0.2 2,889,872 - -0.6 2,889,872 - -1.4 2,889,872 - +0.6 2,889,872 - -0.3 2,889,887 + -0.1 2,889,887 + -0.7 2,889,887 + +0.2 2,889,888 - +0.4 2,889,888 - +0.1 2,889,888 - +0.3 2,889,964 + OH686_13770 0.12 -0.5 2,889,965 - OH686_13770 0.13 -0.7 2,889,965 - OH686_13770 0.13 -1.3 2,890,140 + OH686_13770 0.52 -0.3 2,890,140 + OH686_13770 0.52 -0.2 2,890,140 + OH686_13770 0.52 -0.3 2,890,140 + OH686_13770 0.52 +0.5 2,890,140 + OH686_13770 0.52 -0.3 2,890,141 - OH686_13770 0.52 +0.1 2,890,152 + OH686_13770 0.55 -0.5 2,890,152 + OH686_13770 0.55 -0.4 2,890,152 + OH686_13770 0.55 +0.1 2,890,153 - OH686_13770 0.55 -1.8 2,890,153 - OH686_13770 0.55 +0.8 2,890,153 - OH686_13770 0.55 -1.1 2,890,153 - OH686_13770 0.55 +0.2 2,890,263 + OH686_13770 0.80 -0.1 2,890,263 + OH686_13770 0.80 +0.2 2,890,263 + OH686_13770 0.80 +0.6 2,890,263 + OH686_13770 0.80 -0.3 2,890,263 + OH686_13770 0.80 -0.7 2,890,263 + OH686_13770 0.80 -0.7 2,890,263 + OH686_13770 0.80 -0.1 2,890,263 + OH686_13770 0.80 +0.1 2,890,263 + OH686_13770 0.80 -0.4 2,890,263 + OH686_13770 0.80 +0.6 2,890,263 + OH686_13770 0.80 +0.3 2,890,263 + OH686_13770 0.80 -0.2 2,890,263 + OH686_13770 0.80 -0.3 2,890,263 + OH686_13770 0.80 -0.1 2,890,263 + OH686_13770 0.80 +0.1 2,890,263 + OH686_13770 0.80 +0.4 2,890,264 - OH686_13770 0.80 -0.8 2,890,264 - OH686_13770 0.80 -0.3 2,890,264 - OH686_13770 0.80 -0.4 2,890,264 - OH686_13770 0.80 +0.3 2,890,264 - OH686_13770 0.80 -0.7 2,890,264 - OH686_13770 0.80 -0.4 2,890,264 - OH686_13770 0.80 -0.1 2,890,264 - OH686_13770 0.80 +0.2 2,890,264 - OH686_13770 0.80 -0.6 2,890,264 - OH686_13770 0.80 -0.5 2,890,264 - OH686_13770 0.80 +0.1 2,890,264 - OH686_13770 0.80 +0.1 2,890,264 - OH686_13770 0.80 +1.3 2,890,264 - OH686_13770 0.80 -0.6 2,890,264 - OH686_13770 0.80 +0.1 2,890,264 - OH686_13770 0.80 -0.2 2,890,393 + -1.6 2,890,393 + -0.4 2,890,393 + +0.2 2,890,393 + +0.3 2,890,393 + -0.7 2,890,394 - +0.5 2,890,394 - +1.4 2,890,394 - -0.9 2,890,395 + +0.7 2,890,395 + -0.8 2,890,395 + -1.9 2,890,395 + -0.6 2,890,395 + -0.2 2,890,395 + +1.3 2,890,395 + -0.8 2,890,395 + -0.1 2,890,395 + +0.2 2,890,395 + +0.2 2,890,395 + +0.4 2,890,395 + -0.3 2,890,395 + -0.0 2,890,395 + +0.1 2,890,395 + -0.6 2,890,395 + +1.1 2,890,395 + +0.5 2,890,396 - +0.2 2,890,396 - +0.3 2,890,396 - +0.7 2,890,396 - -0.5 2,890,396 - +0.5 2,890,396 - -0.8 2,890,396 - +0.0 2,890,396 - +0.3 2,890,396 - +0.8 2,890,396 - +1.0 2,890,396 - -1.5 2,890,396 - -0.2 2,890,396 - -1.2 2,890,399 + +1.3 2,890,400 - +0.5 2,890,400 - +1.7 2,890,400 - +0.0 2,890,400 - +0.6 2,890,400 - +0.1 2,890,400 - +0.4 2,890,400 - -0.1 2,890,400 - -0.7 2,890,425 + +0.0 2,890,425 + +0.3 2,890,425 + -0.2 2,890,425 + -0.4 2,890,425 + -0.7 2,890,425 + +0.7 2,890,426 - +0.5 2,890,426 - -1.3 2,890,426 - -0.9 2,890,426 - -1.7 2,890,426 - +0.6 2,890,426 - +0.4 2,890,609 + OH686_13775 0.54 +1.4 2,890,609 + OH686_13775 0.54 +0.3 2,890,609 + OH686_13775 0.54 -0.7 2,890,609 + OH686_13775 0.54 +1.1 2,890,609 + OH686_13775 0.54 -0.2 2,890,609 + OH686_13775 0.54 +0.1 2,890,609 + OH686_13775 0.54 +0.4 2,890,609 + OH686_13775 0.54 -1.2 2,890,609 + OH686_13775 0.54 -0.0 2,890,609 + OH686_13775 0.54 -0.3 2,890,609 + OH686_13775 0.54 -0.2 2,890,609 + OH686_13775 0.54 +0.0 2,890,610 - OH686_13775 0.55 +0.5 2,890,610 - OH686_13775 0.55 +0.5 2,890,610 - OH686_13775 0.55 +0.9 2,890,610 - OH686_13775 0.55 +0.7 2,890,610 - OH686_13775 0.55 -0.7 2,890,610 - OH686_13775 0.55 +0.4 2,890,610 - OH686_13775 0.55 +0.3 2,890,610 - OH686_13775 0.55 +0.4 2,890,610 - OH686_13775 0.55 -0.7 2,890,610 - OH686_13775 0.55 -0.3 2,890,610 - OH686_13775 0.55 +1.1 2,890,610 - OH686_13775 0.55 +0.9 2,890,610 - OH686_13775 0.55 -1.3 2,890,610 - OH686_13775 0.55 -2.6 2,890,610 - OH686_13775 0.55 -0.0 2,890,610 - OH686_13775 0.55 +0.3 2,890,610 - OH686_13775 0.55 +0.1 2,890,737 + +0.7 2,890,737 + +0.4 2,890,977 + OH686_13780 0.23 -2.3 2,891,087 + OH686_13780 0.39 -2.1 2,891,087 + OH686_13780 0.39 -0.7 2,891,087 + OH686_13780 0.39 +0.2 2,891,087 + OH686_13780 0.39 -1.0 2,891,087 + OH686_13780 0.39 -1.3 2,891,088 - OH686_13780 0.39 -2.0 2,891,147 + OH686_13780 0.48 -1.0 2,891,147 + OH686_13780 0.48 -0.2 2,891,148 - OH686_13780 0.48 -1.3 2,891,148 - OH686_13780 0.48 -3.6 2,891,148 - OH686_13780 0.48 -1.0 2,891,267 + OH686_13780 0.65 -0.0
Or see this region's nucleotide sequence