Strain Fitness in Pseudomonas sp. S08-1 around OH686_08165

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,661,632	+		OH686_08155	0.63	+1.2
1,661,633	-		OH686_08155	0.63	+0.6
1,661,815	+		OH686_08155	0.75	+0.6
1,661,816	-		OH686_08155	0.75	-0.2
1,661,816	-		OH686_08155	0.75	+1.4
1,661,816	-		OH686_08155	0.75	+0.6
1,661,816	-		OH686_08155	0.75	-0.7
1,661,816	-		OH686_08155	0.75	-1.0
1,661,816	-		OH686_08155	0.75	+0.6
1,661,816	-		OH686_08155	0.75	-0.8
1,661,816	-		OH686_08155	0.75	+1.0
1,661,842	+		OH686_08155	0.77	+0.8
1,661,842	+		OH686_08155	0.77	+0.0
1,661,842	+		OH686_08155	0.77	-1.2
1,661,843	-		OH686_08155	0.77	-2.0
1,661,843	-		OH686_08155	0.77	-0.7
1,661,843	-		OH686_08155	0.77	+1.6
1,661,843	-		OH686_08155	0.77	-0.2
1,661,843	-		OH686_08155	0.77	-1.0
1,661,843	-		OH686_08155	0.77	-1.3
1,661,843	-		OH686_08155	0.77	+0.6
1,661,911	+		OH686_08155	0.81	-0.1
1,661,912	-		OH686_08155	0.81	-0.4
1,662,006	-		OH686_08155	0.87	-0.4
1,662,006	-		OH686_08155	0.87	-1.2
1,662,006	-		OH686_08155	0.87	-0.8
1,662,230	+				+0.9
1,662,230	+				+0.4
1,662,230	+				-0.8
1,662,230	+				-0.8
1,662,230	+				-0.6
1,662,230	+				-0.1
1,662,230	+				-1.6
1,662,230	+				+0.4
1,662,230	+				-0.5
1,662,230	+				+0.5
1,662,231	-				-0.7
1,662,231	-				-0.1
1,662,231	-				-0.7
1,662,231	-				-1.0
1,662,231	-				+0.0
1,662,231	-				+0.2
1,662,231	-				+0.5
1,662,231	-				-0.3
1,662,231	-				-1.1
1,662,231	-				-0.7
1,662,231	-				-0.5
1,662,232	+				+0.9
1,662,232	+				+0.7
1,662,297	+				-0.1
1,662,438	+		OH686_08160	0.50	+1.2
1,662,438	+		OH686_08160	0.50	+0.7
1,662,438	+		OH686_08160	0.50	-1.0
1,662,439	-		OH686_08160	0.51	-0.2
1,662,439	-		OH686_08160	0.51	-0.2
1,662,528	+		OH686_08160	0.77	-0.3
1,662,528	+		OH686_08160	0.77	+0.8
1,662,529	-		OH686_08160	0.77	-0.8
1,662,529	-		OH686_08160	0.77	+1.4
1,662,663	+				-0.2
1,662,663	+				-0.8
1,662,663	+				-0.2
1,662,663	+				-0.2
1,662,664	-				+0.1
1,662,664	-				+0.5
1,662,664	-				-1.0
1,662,664	-				-0.6
1,662,664	-				-0.7
1,662,664	-				-0.5
1,662,664	-				-0.1
1,662,685	-				+0.2
1,662,832	+		OH686_08165	0.28	-0.0
1,662,832	+		OH686_08165	0.28	+0.7
1,662,832	+		OH686_08165	0.28	+0.3
1,662,832	+		OH686_08165	0.28	+0.6
1,662,832	+		OH686_08165	0.28	-0.2
1,662,832	+		OH686_08165	0.28	-0.5
1,662,833	-		OH686_08165	0.28	-0.2
1,662,833	-		OH686_08165	0.28	-0.9
1,662,833	-		OH686_08165	0.28	-0.1
1,662,833	-		OH686_08165	0.28	-0.9
1,662,833	-		OH686_08165	0.28	+0.0
1,662,833	-		OH686_08165	0.28	-0.5
1,662,922	+		OH686_08165	0.40	-0.3
1,662,923	-		OH686_08165	0.40	+0.0
1,662,923	-		OH686_08165	0.40	+0.1
1,662,923	-		OH686_08165	0.40	-0.3
1,663,017	+		OH686_08165	0.52	+0.4
1,663,017	+		OH686_08165	0.52	-1.7
1,663,017	+		OH686_08165	0.52	+0.4
1,663,017	+		OH686_08165	0.52	+0.2
1,663,017	+		OH686_08165	0.52	+0.6
1,663,017	+		OH686_08165	0.52	+0.1
1,663,017	+		OH686_08165	0.52	-0.8
1,663,017	+		OH686_08165	0.52	-0.6
1,663,017	+		OH686_08165	0.52	-2.0
1,663,017	+		OH686_08165	0.52	-0.2
1,663,018	-		OH686_08165	0.52	-0.2
1,663,018	-		OH686_08165	0.52	-0.6
1,663,018	-		OH686_08165	0.52	+0.6
1,663,018	-		OH686_08165	0.52	+0.5
1,663,018	-		OH686_08165	0.52	-1.1
1,663,018	-		OH686_08165	0.52	-1.3
1,663,018	-		OH686_08165	0.52	+0.3
1,663,019	+		OH686_08165	0.52	-0.2
1,663,019	+		OH686_08165	0.52	-0.1
1,663,019	+		OH686_08165	0.52	-0.4
1,663,019	+		OH686_08165	0.52	-0.1
1,663,019	+		OH686_08165	0.52	+0.6
1,663,020	-		OH686_08165	0.52	-0.2
1,663,020	-		OH686_08165	0.52	+0.1
1,663,068	+		OH686_08165	0.59	-0.1
1,663,068	+		OH686_08165	0.59	+0.4
1,663,068	+		OH686_08165	0.59	+1.0
1,663,069	-		OH686_08165	0.59	+0.3
1,663,069	-		OH686_08165	0.59	+0.3
1,663,069	-		OH686_08165	0.59	-0.2
1,663,212	+		OH686_08165	0.78	+0.3
1,663,212	+		OH686_08165	0.78	+0.3
1,663,342	+				+0.5
1,663,408	+				-0.6
1,663,408	+				-0.3
1,663,408	+				-0.2
1,663,408	+				+0.2
1,663,409	-				+0.3
1,663,409	-				-0.1
1,663,474	-		OH686_08170	0.24	-0.5
1,663,571	+		OH686_08170	0.59	-0.2
1,663,571	+		OH686_08170	0.59	-1.1
1,663,571	+		OH686_08170	0.59	-0.4
1,663,571	+		OH686_08170	0.59	+0.3
1,663,572	-		OH686_08170	0.60	-0.6
1,663,572	-		OH686_08170	0.60	+0.0
1,663,572	-		OH686_08170	0.60	-1.0
1,663,572	-		OH686_08170	0.60	-1.4
1,663,572	-		OH686_08170	0.60	+0.8
1,663,679	+				-0.0
1,663,679	+				-0.8
1,663,679	+				-0.1
1,663,679	+				+0.6
1,663,679	+				+0.0
1,663,679	+				-0.1
1,663,680	-				-0.1
1,663,680	-				-0.6
1,663,680	-				+0.0
1,663,680	-				-1.4
1,663,680	-				-0.7
1,663,707	+				-1.1
1,663,707	+				+0.5
1,663,707	+				+0.2
1,663,707	+				-0.6
1,663,708	-				+0.0
1,663,708	-				+0.2
1,663,708	-				-1.0
1,663,708	-				-0.6
1,663,708	-				-0.2
1,663,708	-				+0.2
1,663,708	-				-0.2
1,663,713	+				-1.5
1,663,713	+				+1.2
1,663,713	+				-0.2
1,663,714	-				-0.2
1,663,728	+				-0.8
1,663,728	+				-1.0
1,663,728	+				-0.8
1,663,728	+				-1.0
1,663,728	+				+0.3
1,663,728	+				-0.4
1,663,728	+				-0.1
1,663,728	+				+0.7
1,663,728	+				-0.2
1,663,728	+				+0.2
1,663,728	+				-0.6
1,663,728	+				-0.4
1,663,728	+				+1.6
1,663,728	+				-2.0
1,663,728	+				+0.8
1,663,728	+				-0.6
1,663,729	-				+0.7
1,663,729	-				+0.2
1,663,729	-				-2.0
1,663,729	-				-0.5
1,663,729	-				+0.1
1,663,729	-				-1.6
1,663,729	-				+2.2
1,663,729	-				-0.5
1,663,729	-				-0.1
1,663,729	-				-0.1
1,663,729	-				-0.3
1,663,729	-				+0.0
1,663,729	-				-0.2
1,663,729	-				+0.2
1,663,729	-				-0.8
1,663,729	-				-0.5
1,663,729	-				-0.5
1,663,729	-				-0.4
1,663,729	-				+0.3
1,663,729	-				-0.7
1,663,781	+				-0.7
1,663,781	+				+0.3
1,663,782	-				+0.4
1,663,782	-				-0.8
1,663,782	-				-1.6
1,663,787	+				-0.2
1,663,787	+				-0.1
1,663,787	+				-1.7
1,663,787	+				-1.6
1,663,787	+				-0.2
1,663,787	+				+0.4
1,663,787	+				+0.2
1,663,787	+				-0.3
1,663,787	+				-0.2
1,663,787	+				-0.1
1,663,787	+				-0.5
1,663,787	+				-0.7
1,663,787	+				-0.2
1,663,787	+				-0.2
1,663,788	-				-0.6
1,663,788	-				-1.5
1,663,788	-				-3.1
1,663,788	-				-2.6
1,663,788	-				+0.2
1,663,788	-				+0.4
1,663,788	-				+0.7
1,663,788	-				-0.3
1,663,788	-				-1.0
1,663,788	-				-0.7
1,663,788	-				-0.3
1,663,788	-				+0.2
1,663,788	-				-0.1
1,663,788	-				-1.1
1,663,788	-				+0.2
1,663,788	-				-0.7
1,663,791	+				-0.4
1,663,791	+				-0.6
1,663,791	+				+0.6
1,663,791	+				+0.6
1,663,791	+				-0.1
1,663,791	+				-0.3
1,663,791	+				-0.2
1,663,791	+				+1.1
1,663,791	+				-0.1
1,663,791	+				-1.8
1,663,791	+				-0.1
1,663,791	+				-0.2
1,663,791	+				+0.3
1,663,792	-				-0.1
1,663,792	-				-0.7
1,663,792	-				+0.6
1,663,792	-				-0.2
1,663,792	-				-2.0
1,663,792	-				+0.3
1,663,795	+				+0.0
1,663,795	+				+0.0
1,663,795	+				-0.6
1,663,795	+				+0.1
1,663,795	+				-0.4
1,663,795	+				-0.8
1,663,796	-				-0.5
1,663,796	-				+1.9
1,663,796	-				-0.6
1,663,815	+				-1.0
1,663,947	+		OH686_08175	0.20	+0.3
1,663,947	+		OH686_08175	0.20	-0.4
1,663,947	+		OH686_08175	0.20	-1.0
1,663,947	+		OH686_08175	0.20	-1.1
1,663,947	+		OH686_08175	0.20	+0.0
1,663,947	+		OH686_08175	0.20	-0.8
1,663,947	+		OH686_08175	0.20	+0.4
1,663,947	+		OH686_08175	0.20	-1.3
1,663,947	+		OH686_08175	0.20	-0.1
1,663,947	+		OH686_08175	0.20	+1.7
1,663,947	+		OH686_08175	0.20	-0.2
1,663,947	+		OH686_08175	0.20	-0.1
1,663,947	+		OH686_08175	0.20	-0.8
1,663,947	+		OH686_08175	0.20	-0.6
1,663,947	+		OH686_08175	0.20	-0.4
1,663,947	+		OH686_08175	0.20	+0.3
1,663,947	+		OH686_08175	0.20	+0.4
1,663,947	+		OH686_08175	0.20	-0.5
1,663,947	+		OH686_08175	0.20	-0.3
1,663,947	+		OH686_08175	0.20	+0.5
1,663,948	-		OH686_08175	0.20	-0.5
1,663,948	-		OH686_08175	0.20	+0.1
1,663,948	-		OH686_08175	0.20	+0.3
1,663,948	-		OH686_08175	0.20	+0.6
1,663,948	-		OH686_08175	0.20	-0.5
1,663,948	-		OH686_08175	0.20	-1.0
1,663,948	-		OH686_08175	0.20	-0.5
1,663,948	-		OH686_08175	0.20	-1.4
1,663,948	-		OH686_08175	0.20	+0.0
1,663,948	-		OH686_08175	0.20	+0.3
1,663,948	-		OH686_08175	0.20	-0.6
1,663,948	-		OH686_08175	0.20	-0.6
1,663,948	-		OH686_08175	0.20	-0.6
1,663,948	-		OH686_08175	0.20	-1.4
1,663,948	-		OH686_08175	0.20	-2.7
1,663,948	-		OH686_08175	0.20	+0.6
1,663,948	-		OH686_08175	0.20	+1.1
1,663,948	-		OH686_08175	0.20	-0.2
1,664,001	+		OH686_08175	0.27	-0.6
1,664,001	+		OH686_08175	0.27	-0.2
1,664,001	+		OH686_08175	0.27	-0.0
1,664,001	+		OH686_08175	0.27	+0.2
1,664,001	+		OH686_08175	0.27	+0.9
1,664,001	+		OH686_08175	0.27	+0.2
1,664,001	+		OH686_08175	0.27	+3.1
1,664,001	+		OH686_08175	0.27	+0.3
1,664,001	+		OH686_08175	0.27	-0.1
1,664,001	+		OH686_08175	0.27	-0.3
1,664,001	+		OH686_08175	0.27	-0.2
1,664,001	+		OH686_08175	0.27	-1.0
1,664,002	-		OH686_08175	0.27	+0.1
1,664,002	-		OH686_08175	0.27	-0.9
1,664,002	-		OH686_08175	0.27	+0.0
1,664,002	-		OH686_08175	0.27	-1.1
1,664,062	-		OH686_08175	0.34	+0.3
1,664,062	-		OH686_08175	0.34	+0.3
1,664,094	+		OH686_08175	0.38	-0.2
1,664,124	+		OH686_08175	0.42	-0.8
1,664,124	+		OH686_08175	0.42	+0.5
1,664,124	+		OH686_08175	0.42	-0.0
1,664,124	+		OH686_08175	0.42	-0.5
1,664,124	+		OH686_08175	0.42	+0.6
1,664,124	+		OH686_08175	0.42	+0.8
1,664,124	+		OH686_08175	0.42	-0.5
1,664,124	+		OH686_08175	0.42	+0.6
1,664,124	+		OH686_08175	0.42	-0.3
1,664,125	-		OH686_08175	0.42	-0.2
1,664,125	-		OH686_08175	0.42	-0.5
1,664,125	-		OH686_08175	0.42	+0.1
1,664,125	-		OH686_08175	0.42	+0.2
1,664,125	-		OH686_08175	0.42	+0.0
1,664,125	-		OH686_08175	0.42	+0.3
1,664,125	-		OH686_08175	0.42	-0.2
1,664,125	-		OH686_08175	0.42	+0.0
1,664,125	-		OH686_08175	0.42	-0.6
1,664,125	-		OH686_08175	0.42	+0.1
1,664,125	-		OH686_08175	0.42	-0.1
1,664,129	+		OH686_08175	0.43	-1.1
1,664,161	-		OH686_08175	0.47	+0.6
1,664,161	-		OH686_08175	0.47	-0.1
1,664,268	-		OH686_08175	0.60	+0.3