Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4425 and EX28DRAFT_4426 are separated by 196 nucleotides EX28DRAFT_4426 and EX28DRAFT_4427 are separated by 9 nucleotides EX28DRAFT_4427 and EX28DRAFT_4428 are separated by 79 nucleotides
EX28DRAFT_4425: EX28DRAFT_4425 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 92,181 to 93,581
_4425
EX28DRAFT_4426: EX28DRAFT_4426 - transcriptional regulator, TetR family, at 93,778 to 94,416
_4426
EX28DRAFT_4427: EX28DRAFT_4427 - Protein of unknown function (DUF1422), at 94,426 to 94,785
_4427
EX28DRAFT_4428: EX28DRAFT_4428 - tRNA (uracil(54)-C(5))-methyltransferase, at 94,865 to 95,977
_4428
Position (kb) 93
94
95 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 93.041 kb on + strand, within EX28DRAFT_4425 at 93.302 kb on + strand, within EX28DRAFT_4425 at 93.368 kb on - strand, within EX28DRAFT_4425 at 93.465 kb on - strand at 93.465 kb on - strand at 93.549 kb on - strand at 93.603 kb on + strand at 93.651 kb on - strand at 93.651 kb on - strand at 93.651 kb on - strand at 93.693 kb on - strand at 93.693 kb on - strand at 93.726 kb on - strand at 93.741 kb on + strand at 93.742 kb on - strand at 93.743 kb on + strand at 93.743 kb on + strand at 94.193 kb on - strand, within EX28DRAFT_4426 at 94.366 kb on + strand at 94.495 kb on - strand, within EX28DRAFT_4427 at 94.567 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.655 kb on + strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.656 kb on - strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.657 kb on + strand, within EX28DRAFT_4427 at 94.658 kb on - strand, within EX28DRAFT_4427 at 94.658 kb on - strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.659 kb on + strand, within EX28DRAFT_4427 at 94.660 kb on - strand, within EX28DRAFT_4427 at 94.699 kb on - strand, within EX28DRAFT_4427 at 94.776 kb on - strand at 94.806 kb on + strand at 94.807 kb on - strand at 94.859 kb on + strand at 94.898 kb on - strand at 95.094 kb on + strand, within EX28DRAFT_4428 at 95.217 kb on + strand, within EX28DRAFT_4428 at 95.218 kb on - strand, within EX28DRAFT_4428 at 95.275 kb on + strand, within EX28DRAFT_4428
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 93,041 + EX28DRAFT_4425 0.61 +0.7 93,302 + EX28DRAFT_4425 0.80 +0.8 93,368 - EX28DRAFT_4425 0.85 +0.1 93,465 - +1.5 93,465 - -0.1 93,549 - +0.7 93,603 + -0.2 93,651 - +0.1 93,651 - +0.4 93,651 - -0.2 93,693 - +1.5 93,693 - -2.8 93,726 - +0.7 93,741 + +0.2 93,742 - +3.0 93,743 + -0.2 93,743 + -0.2 94,193 - EX28DRAFT_4426 0.65 -1.0 94,366 + -0.4 94,495 - EX28DRAFT_4427 0.19 +0.2 94,567 + EX28DRAFT_4427 0.39 +0.3 94,655 + EX28DRAFT_4427 0.64 +0.2 94,655 + EX28DRAFT_4427 0.64 +0.3 94,655 + EX28DRAFT_4427 0.64 +0.5 94,656 - EX28DRAFT_4427 0.64 +0.3 94,656 - EX28DRAFT_4427 0.64 +0.2 94,656 - EX28DRAFT_4427 0.64 +0.2 94,656 - EX28DRAFT_4427 0.64 +0.9 94,656 - EX28DRAFT_4427 0.64 +0.7 94,656 - EX28DRAFT_4427 0.64 -0.6 94,656 - EX28DRAFT_4427 0.64 +0.3 94,656 - EX28DRAFT_4427 0.64 +0.1 94,656 - EX28DRAFT_4427 0.64 +0.3 94,657 + EX28DRAFT_4427 0.64 +0.4 94,657 + EX28DRAFT_4427 0.64 +0.0 94,657 + EX28DRAFT_4427 0.64 +0.5 94,657 + EX28DRAFT_4427 0.64 +0.4 94,658 - EX28DRAFT_4427 0.64 +0.4 94,658 - EX28DRAFT_4427 0.64 +1.2 94,659 + EX28DRAFT_4427 0.65 +0.7 94,659 + EX28DRAFT_4427 0.65 +0.2 94,659 + EX28DRAFT_4427 0.65 +0.8 94,659 + EX28DRAFT_4427 0.65 -0.0 94,659 + EX28DRAFT_4427 0.65 -2.8 94,659 + EX28DRAFT_4427 0.65 +1.6 94,660 - EX28DRAFT_4427 0.65 +0.5 94,699 - EX28DRAFT_4427 0.76 -0.3 94,776 - +0.5 94,806 + -0.3 94,807 - +0.4 94,859 + -0.5 94,898 - -0.2 95,094 + EX28DRAFT_4428 0.21 -0.8 95,217 + EX28DRAFT_4428 0.32 -1.3 95,218 - EX28DRAFT_4428 0.32 +0.1 95,275 + EX28DRAFT_4428 0.37 +0.0
Or see this region's nucleotide sequence