Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4204 and EX28DRAFT_4205 overlap by 4 nucleotides EX28DRAFT_4205 and EX28DRAFT_4206 overlap by 1 nucleotides EX28DRAFT_4206 and EX28DRAFT_4207 overlap by 8 nucleotides EX28DRAFT_4207 and EX28DRAFT_4208 overlap by 4 nucleotides
EX28DRAFT_4204: EX28DRAFT_4204 - phosphonate C-P lyase system protein PhnG, at 12,623 to 13,075
_4204
EX28DRAFT_4205: EX28DRAFT_4205 - phosphonate C-P lyase system protein PhnH, at 13,072 to 13,656
_4205
EX28DRAFT_4206: EX28DRAFT_4206 - Uncharacterized enzyme of phosphonate metabolism, at 13,656 to 14,720
_4206
EX28DRAFT_4207: EX28DRAFT_4207 - Uncharacterized enzyme of phosphonate metabolism, at 14,713 to 15,558
_4207
EX28DRAFT_4208: EX28DRAFT_4208 - phosphonate C-P lyase system protein PhnK, at 15,555 to 16,310
_4208
Position (kb) 13
14
15 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 12.869 kb on + strand, within EX28DRAFT_4204 at 12.870 kb on - strand, within EX28DRAFT_4204 at 12.941 kb on + strand, within EX28DRAFT_4204 at 12.942 kb on - strand, within EX28DRAFT_4204 at 13.388 kb on + strand, within EX28DRAFT_4205 at 13.389 kb on - strand, within EX28DRAFT_4205 at 13.389 kb on - strand, within EX28DRAFT_4205 at 13.389 kb on - strand, within EX28DRAFT_4205 at 13.660 kb on - strand at 13.660 kb on - strand at 13.778 kb on - strand, within EX28DRAFT_4206 at 13.778 kb on - strand, within EX28DRAFT_4206 at 13.870 kb on + strand, within EX28DRAFT_4206 at 13.870 kb on + strand, within EX28DRAFT_4206 at 13.870 kb on + strand, within EX28DRAFT_4206 at 13.870 kb on + strand, within EX28DRAFT_4206 at 13.871 kb on - strand, within EX28DRAFT_4206 at 13.871 kb on - strand, within EX28DRAFT_4206 at 13.871 kb on - strand, within EX28DRAFT_4206 at 13.871 kb on - strand, within EX28DRAFT_4206 at 13.913 kb on + strand, within EX28DRAFT_4206 at 13.982 kb on + strand, within EX28DRAFT_4206 at 14.026 kb on - strand, within EX28DRAFT_4206 at 14.481 kb on + strand, within EX28DRAFT_4206 at 14.656 kb on - strand at 14.723 kb on + strand at 14.724 kb on - strand at 14.724 kb on - strand at 14.787 kb on + strand at 14.788 kb on - strand at 14.788 kb on - strand at 14.992 kb on - strand, within EX28DRAFT_4207 at 14.992 kb on - strand, within EX28DRAFT_4207 at 15.223 kb on + strand, within EX28DRAFT_4207 at 15.224 kb on - strand, within EX28DRAFT_4207 at 15.224 kb on - strand, within EX28DRAFT_4207 at 15.224 kb on - strand, within EX28DRAFT_4207 at 15.224 kb on - strand, within EX28DRAFT_4207 at 15.254 kb on - strand, within EX28DRAFT_4207 at 15.353 kb on - strand, within EX28DRAFT_4207 at 15.367 kb on + strand, within EX28DRAFT_4207 at 15.460 kb on + strand, within EX28DRAFT_4207 at 15.460 kb on + strand, within EX28DRAFT_4207 at 15.578 kb on + strand at 15.578 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 12,869 + EX28DRAFT_4204 0.54 -0.1 12,870 - EX28DRAFT_4204 0.55 +0.3 12,941 + EX28DRAFT_4204 0.70 +0.5 12,942 - EX28DRAFT_4204 0.70 +0.2 13,388 + EX28DRAFT_4205 0.54 +0.0 13,389 - EX28DRAFT_4205 0.54 +0.4 13,389 - EX28DRAFT_4205 0.54 +0.2 13,389 - EX28DRAFT_4205 0.54 +0.3 13,660 - -0.4 13,660 - -0.2 13,778 - EX28DRAFT_4206 0.11 -0.7 13,778 - EX28DRAFT_4206 0.11 +0.4 13,870 + EX28DRAFT_4206 0.20 -0.0 13,870 + EX28DRAFT_4206 0.20 -1.8 13,870 + EX28DRAFT_4206 0.20 +0.4 13,870 + EX28DRAFT_4206 0.20 +0.2 13,871 - EX28DRAFT_4206 0.20 -1.2 13,871 - EX28DRAFT_4206 0.20 -0.6 13,871 - EX28DRAFT_4206 0.20 -0.3 13,871 - EX28DRAFT_4206 0.20 -0.3 13,913 + EX28DRAFT_4206 0.24 -0.2 13,982 + EX28DRAFT_4206 0.31 -0.3 14,026 - EX28DRAFT_4206 0.35 +3.0 14,481 + EX28DRAFT_4206 0.77 -0.1 14,656 - -0.1 14,723 + +0.4 14,724 - +0.6 14,724 - +0.5 14,787 + -0.2 14,788 - -0.0 14,788 - -0.0 14,992 - EX28DRAFT_4207 0.33 +0.4 14,992 - EX28DRAFT_4207 0.33 +0.1 15,223 + EX28DRAFT_4207 0.60 -0.4 15,224 - EX28DRAFT_4207 0.60 -1.8 15,224 - EX28DRAFT_4207 0.60 +0.1 15,224 - EX28DRAFT_4207 0.60 -0.1 15,224 - EX28DRAFT_4207 0.60 +0.7 15,254 - EX28DRAFT_4207 0.64 +0.2 15,353 - EX28DRAFT_4207 0.76 +0.0 15,367 + EX28DRAFT_4207 0.77 +0.5 15,460 + EX28DRAFT_4207 0.88 -0.0 15,460 + EX28DRAFT_4207 0.88 +0.1 15,578 + +0.2 15,578 + -0.1
Or see this region's nucleotide sequence