Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4072 and EX28DRAFT_4073 are separated by 169 nucleotides EX28DRAFT_4073 and EX28DRAFT_4074 are separated by 37 nucleotides EX28DRAFT_4074 and EX28DRAFT_4075 are separated by 317 nucleotides EX28DRAFT_4075 and EX28DRAFT_4076 are separated by 167 nucleotides
EX28DRAFT_4072: EX28DRAFT_4072 - Demethylmenaquinone methyltransferase, at 47,289 to 47,981
_4072
EX28DRAFT_4073: EX28DRAFT_4073 - transcriptional regulator, IclR family, at 48,151 to 48,888
_4073
EX28DRAFT_4074: EX28DRAFT_4074 - Sugar phosphate permease, at 48,926 to 50,260
_4074
EX28DRAFT_4075: EX28DRAFT_4075 - Ion channel, at 50,578 to 50,976
_4075
EX28DRAFT_4076: EX28DRAFT_4076 - integral membrane protein, TerC family, at 51,144 to 52,169
_4076
Position (kb)
48
49
50
51 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 47.981 kb on + strand at 47.981 kb on + strand at 47.982 kb on - strand at 47.982 kb on - strand at 48.059 kb on + strand at 48.088 kb on + strand at 48.088 kb on + strand at 48.089 kb on - strand at 48.118 kb on + strand at 48.147 kb on - strand at 48.170 kb on + strand at 48.310 kb on + strand, within EX28DRAFT_4073 at 48.362 kb on - strand, within EX28DRAFT_4073 at 48.376 kb on + strand, within EX28DRAFT_4073 at 48.376 kb on + strand, within EX28DRAFT_4073 at 48.460 kb on + strand, within EX28DRAFT_4073 at 48.460 kb on + strand, within EX28DRAFT_4073 at 48.461 kb on - strand, within EX28DRAFT_4073 at 48.461 kb on - strand, within EX28DRAFT_4073 at 48.578 kb on + strand, within EX28DRAFT_4073 at 48.579 kb on - strand, within EX28DRAFT_4073 at 48.579 kb on - strand, within EX28DRAFT_4073 at 48.638 kb on - strand, within EX28DRAFT_4073 at 48.773 kb on + strand, within EX28DRAFT_4073 at 48.774 kb on - strand, within EX28DRAFT_4073 at 48.829 kb on - strand at 49.042 kb on - strand at 49.064 kb on - strand, within EX28DRAFT_4074 at 49.148 kb on - strand, within EX28DRAFT_4074 at 49.205 kb on + strand, within EX28DRAFT_4074 at 49.213 kb on + strand, within EX28DRAFT_4074 at 49.213 kb on + strand, within EX28DRAFT_4074 at 49.346 kb on + strand, within EX28DRAFT_4074 at 49.346 kb on + strand, within EX28DRAFT_4074 at 49.646 kb on - strand, within EX28DRAFT_4074 at 49.660 kb on + strand, within EX28DRAFT_4074 at 49.660 kb on + strand, within EX28DRAFT_4074 at 49.665 kb on - strand, within EX28DRAFT_4074 at 49.742 kb on + strand, within EX28DRAFT_4074 at 49.743 kb on - strand, within EX28DRAFT_4074 at 49.849 kb on - strand, within EX28DRAFT_4074 at 49.908 kb on + strand, within EX28DRAFT_4074 at 49.908 kb on + strand, within EX28DRAFT_4074 at 49.909 kb on - strand, within EX28DRAFT_4074 at 49.909 kb on - strand, within EX28DRAFT_4074 at 49.939 kb on + strand, within EX28DRAFT_4074 at 49.940 kb on - strand, within EX28DRAFT_4074 at 49.969 kb on + strand, within EX28DRAFT_4074 at 50.041 kb on - strand, within EX28DRAFT_4074 at 50.052 kb on + strand, within EX28DRAFT_4074 at 50.157 kb on + strand at 50.157 kb on + strand at 50.216 kb on + strand at 50.216 kb on + strand at 50.216 kb on + strand at 50.216 kb on + strand at 50.216 kb on + strand at 50.217 kb on - strand at 50.217 kb on - strand at 50.242 kb on + strand at 50.246 kb on + strand at 50.246 kb on + strand at 50.246 kb on + strand at 50.246 kb on + strand at 50.377 kb on + strand at 50.377 kb on + strand at 50.378 kb on - strand at 50.378 kb on - strand at 50.381 kb on + strand at 50.382 kb on - strand at 50.414 kb on - strand at 50.414 kb on - strand at 50.415 kb on + strand at 50.415 kb on + strand at 50.416 kb on - strand at 50.446 kb on + strand at 50.446 kb on + strand at 50.514 kb on + strand at 50.514 kb on + strand at 50.514 kb on + strand at 50.514 kb on + strand at 50.514 kb on + strand at 50.515 kb on - strand at 50.553 kb on + strand at 50.586 kb on - strand at 50.586 kb on - strand at 50.586 kb on - strand at 50.596 kb on - strand at 50.599 kb on - strand at 50.696 kb on + strand, within EX28DRAFT_4075 at 50.768 kb on - strand, within EX28DRAFT_4075 at 50.787 kb on + strand, within EX28DRAFT_4075 at 50.828 kb on - strand, within EX28DRAFT_4075 at 50.901 kb on - strand, within EX28DRAFT_4075 at 51.005 kb on - strand at 51.009 kb on + strand at 51.010 kb on - strand at 51.010 kb on - strand at 51.014 kb on + strand at 51.014 kb on + strand at 51.015 kb on - strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.143 kb on + strand at 51.144 kb on - strand at 51.144 kb on - strand at 51.231 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 47,981 + +0.5 47,981 + -0.4 47,982 - +0.6 47,982 - -0.3 48,059 + -1.0 48,088 + +0.4 48,088 + -0.2 48,089 - +1.7 48,118 + -0.7 48,147 - +1.3 48,170 + -0.9 48,310 + EX28DRAFT_4073 0.22 -0.1 48,362 - EX28DRAFT_4073 0.29 -0.5 48,376 + EX28DRAFT_4073 0.30 +1.6 48,376 + EX28DRAFT_4073 0.30 +0.5 48,460 + EX28DRAFT_4073 0.42 +0.7 48,460 + EX28DRAFT_4073 0.42 -0.5 48,461 - EX28DRAFT_4073 0.42 +1.0 48,461 - EX28DRAFT_4073 0.42 +0.6 48,578 + EX28DRAFT_4073 0.58 -0.5 48,579 - EX28DRAFT_4073 0.58 +0.1 48,579 - EX28DRAFT_4073 0.58 +1.3 48,638 - EX28DRAFT_4073 0.66 +0.5 48,773 + EX28DRAFT_4073 0.84 -0.5 48,774 - EX28DRAFT_4073 0.84 +1.4 48,829 - +1.0 49,042 - +1.1 49,064 - EX28DRAFT_4074 0.10 +2.4 49,148 - EX28DRAFT_4074 0.17 -0.2 49,205 + EX28DRAFT_4074 0.21 -0.5 49,213 + EX28DRAFT_4074 0.21 +0.3 49,213 + EX28DRAFT_4074 0.21 +0.5 49,346 + EX28DRAFT_4074 0.31 +0.3 49,346 + EX28DRAFT_4074 0.31 -0.5 49,646 - EX28DRAFT_4074 0.54 +0.3 49,660 + EX28DRAFT_4074 0.55 -0.1 49,660 + EX28DRAFT_4074 0.55 +0.2 49,665 - EX28DRAFT_4074 0.55 +0.5 49,742 + EX28DRAFT_4074 0.61 -0.2 49,743 - EX28DRAFT_4074 0.61 +0.2 49,849 - EX28DRAFT_4074 0.69 +0.1 49,908 + EX28DRAFT_4074 0.74 +0.3 49,908 + EX28DRAFT_4074 0.74 +0.0 49,909 - EX28DRAFT_4074 0.74 +0.3 49,909 - EX28DRAFT_4074 0.74 +0.7 49,939 + EX28DRAFT_4074 0.76 -0.4 49,940 - EX28DRAFT_4074 0.76 +1.8 49,969 + EX28DRAFT_4074 0.78 +0.5 50,041 - EX28DRAFT_4074 0.84 -0.0 50,052 + EX28DRAFT_4074 0.84 +0.0 50,157 + -0.5 50,157 + -0.4 50,216 + +0.1 50,216 + -0.4 50,216 + -0.7 50,216 + -2.1 50,216 + +0.3 50,217 - -0.8 50,217 - +0.7 50,242 + -0.6 50,246 + -1.6 50,246 + +0.1 50,246 + -0.4 50,246 + -0.1 50,377 + +1.2 50,377 + -0.6 50,378 - -0.1 50,378 - +0.6 50,381 + -1.3 50,382 - +0.6 50,414 - +0.1 50,414 - -0.2 50,415 + -0.5 50,415 + -0.5 50,416 - -1.2 50,446 + -1.3 50,446 + +0.2 50,514 + -1.5 50,514 + -0.4 50,514 + +0.3 50,514 + -0.2 50,514 + -0.2 50,515 - +0.1 50,553 + -1.4 50,586 - +0.6 50,586 - -0.3 50,586 - +0.2 50,596 - -0.1 50,599 - +0.2 50,696 + EX28DRAFT_4075 0.30 -1.2 50,768 - EX28DRAFT_4075 0.48 -0.0 50,787 + EX28DRAFT_4075 0.52 +0.1 50,828 - EX28DRAFT_4075 0.63 +1.3 50,901 - EX28DRAFT_4075 0.81 +0.4 51,005 - +0.0 51,009 + -0.4 51,010 - -0.0 51,010 - -0.4 51,014 + -1.2 51,014 + -0.2 51,015 - -0.1 51,143 + +0.9 51,143 + -0.6 51,143 + -0.4 51,143 + +0.2 51,144 - -0.4 51,144 - +1.6 51,231 - +1.1
Or see this region's nucleotide sequence