Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3900
Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MS_media with arsenate 5 mM |
---|---|---|---|---|---|
remove | |||||
107,922 | + | EX28DRAFT_3899 | 0.85 | -5.3 | |
107,923 | - | EX28DRAFT_3899 | 0.85 | -1.1 | |
107,977 | - | EX28DRAFT_3899 | 0.88 | -0.8 | |
108,010 | - | EX28DRAFT_3899 | 0.90 | -0.2 | |
108,018 | + | EX28DRAFT_3899 | 0.90 | +0.2 | |
108,018 | + | EX28DRAFT_3899 | 0.90 | -1.7 | |
108,018 | + | EX28DRAFT_3899 | 0.90 | -1.4 | |
108,171 | + | -0.7 | |||
108,230 | - | -1.3 | |||
108,230 | - | -0.4 | |||
108,251 | + | -0.0 | |||
108,259 | + | -3.0 | |||
108,319 | + | -0.1 | |||
108,319 | + | +0.1 | |||
108,319 | + | +1.3 | |||
108,320 | - | -1.8 | |||
108,320 | - | -0.1 | |||
108,711 | - | EX28DRAFT_3900 | 0.67 | -0.7 | |
108,746 | + | EX28DRAFT_3900 | 0.73 | -0.6 | |
108,747 | - | EX28DRAFT_3900 | 0.73 | -2.2 | |
109,109 | + | -0.6 | |||
109,325 | + | EX28DRAFT_3901 | 0.19 | -1.6 | |
109,558 | + | EX28DRAFT_3901 | 0.30 | +0.5 | |
109,566 | + | EX28DRAFT_3901 | 0.31 | -1.5 | |
109,614 | + | EX28DRAFT_3901 | 0.33 | -0.5 | |
109,681 | - | EX28DRAFT_3901 | 0.36 | -1.0 | |
109,730 | - | EX28DRAFT_3901 | 0.38 | -0.2 | |
109,879 | + | EX28DRAFT_3901 | 0.46 | -0.2 |
Or see this region's nucleotide sequence