Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3808 and EX28DRAFT_3809 are separated by 154 nucleotides EX28DRAFT_3809 and EX28DRAFT_3810 overlap by 23 nucleotides EX28DRAFT_3810 and EX28DRAFT_3811 overlap by 38 nucleotides
EX28DRAFT_3808: EX28DRAFT_3808 - Autotransporter protein or domain, integral membrane beta-barrel involved in protein secretion, at 12,544 to 13,242
_3808
EX28DRAFT_3809: EX28DRAFT_3809 - DNA-3-methyladenine glycosylase I (EC 3.2.2.20), at 13,397 to 13,978
_3809
EX28DRAFT_3810: EX28DRAFT_3810 - Acetyltransferase (GNAT) domain, at 13,956 to 14,402
_3810
EX28DRAFT_3811: EX28DRAFT_3811 - molybdopterin guanine dinucleotide-containing S/N-oxide reductases, at 14,365 to 16,692
_3811
Position (kb) 13
14
15 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 13.006 kb on + strand, within EX28DRAFT_3808 at 13.006 kb on + strand, within EX28DRAFT_3808 at 13.007 kb on - strand, within EX28DRAFT_3808 at 13.007 kb on - strand, within EX28DRAFT_3808 at 13.007 kb on - strand, within EX28DRAFT_3808 at 13.008 kb on + strand, within EX28DRAFT_3808 at 13.009 kb on - strand, within EX28DRAFT_3808 at 13.009 kb on - strand, within EX28DRAFT_3808 at 13.009 kb on - strand, within EX28DRAFT_3808 at 13.048 kb on - strand, within EX28DRAFT_3808 at 13.063 kb on - strand, within EX28DRAFT_3808 at 13.063 kb on - strand, within EX28DRAFT_3808 at 13.098 kb on + strand, within EX28DRAFT_3808 at 13.098 kb on + strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.099 kb on - strand, within EX28DRAFT_3808 at 13.116 kb on + strand, within EX28DRAFT_3808 at 13.137 kb on + strand, within EX28DRAFT_3808 at 13.138 kb on - strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.139 kb on + strand, within EX28DRAFT_3808 at 13.140 kb on - strand, within EX28DRAFT_3808 at 13.165 kb on - strand, within EX28DRAFT_3808 at 13.165 kb on - strand, within EX28DRAFT_3808 at 13.235 kb on - strand at 13.276 kb on + strand at 13.304 kb on - strand at 13.312 kb on + strand at 13.312 kb on + strand at 13.316 kb on - strand at 13.316 kb on - strand at 13.319 kb on + strand at 13.319 kb on + strand at 13.319 kb on + strand at 13.320 kb on - strand at 13.320 kb on - strand at 13.320 kb on - strand at 13.331 kb on - strand at 13.331 kb on - strand at 13.334 kb on - strand at 13.334 kb on - strand at 13.382 kb on + strand at 13.433 kb on + strand at 13.433 kb on + strand at 13.434 kb on - strand at 13.434 kb on - strand at 13.435 kb on + strand at 13.537 kb on + strand, within EX28DRAFT_3809 at 13.538 kb on - strand, within EX28DRAFT_3809 at 13.892 kb on - strand, within EX28DRAFT_3809 at 14.142 kb on - strand, within EX28DRAFT_3810 at 14.255 kb on - strand, within EX28DRAFT_3810 at 14.255 kb on - strand, within EX28DRAFT_3810 at 14.268 kb on + strand, within EX28DRAFT_3810 at 14.298 kb on + strand, within EX28DRAFT_3810 at 14.417 kb on + strand at 14.418 kb on - strand at 14.418 kb on - strand at 14.685 kb on + strand, within EX28DRAFT_3811 at 14.740 kb on - strand, within EX28DRAFT_3811 at 14.741 kb on + strand, within EX28DRAFT_3811 at 14.741 kb on + strand, within EX28DRAFT_3811 at 14.741 kb on + strand, within EX28DRAFT_3811 at 14.741 kb on + strand, within EX28DRAFT_3811 at 14.742 kb on - strand, within EX28DRAFT_3811 at 14.742 kb on - strand, within EX28DRAFT_3811 at 14.742 kb on - strand, within EX28DRAFT_3811 at 14.742 kb on - strand, within EX28DRAFT_3811 at 14.746 kb on - strand, within EX28DRAFT_3811 at 14.841 kb on + strand, within EX28DRAFT_3811 at 14.841 kb on + strand, within EX28DRAFT_3811 at 14.841 kb on + strand, within EX28DRAFT_3811 at 14.842 kb on - strand, within EX28DRAFT_3811 at 14.842 kb on - strand, within EX28DRAFT_3811 at 14.842 kb on - strand, within EX28DRAFT_3811 at 14.842 kb on - strand, within EX28DRAFT_3811 at 14.864 kb on + strand, within EX28DRAFT_3811 at 14.891 kb on + strand, within EX28DRAFT_3811 at 14.892 kb on - strand, within EX28DRAFT_3811 at 15.080 kb on + strand, within EX28DRAFT_3811 at 15.228 kb on + strand, within EX28DRAFT_3811 at 15.228 kb on + strand, within EX28DRAFT_3811 at 15.228 kb on + strand, within EX28DRAFT_3811 at 15.228 kb on + strand, within EX28DRAFT_3811 at 15.229 kb on - strand, within EX28DRAFT_3811 at 15.301 kb on - strand, within EX28DRAFT_3811
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 13,006 + EX28DRAFT_3808 0.66 -0.4 13,006 + EX28DRAFT_3808 0.66 -0.4 13,007 - EX28DRAFT_3808 0.66 -4.4 13,007 - EX28DRAFT_3808 0.66 +0.6 13,007 - EX28DRAFT_3808 0.66 +1.1 13,008 + EX28DRAFT_3808 0.66 -0.4 13,009 - EX28DRAFT_3808 0.67 -0.1 13,009 - EX28DRAFT_3808 0.67 +0.7 13,009 - EX28DRAFT_3808 0.67 -3.1 13,048 - EX28DRAFT_3808 0.72 -0.5 13,063 - EX28DRAFT_3808 0.74 +0.1 13,063 - EX28DRAFT_3808 0.74 +1.1 13,098 + EX28DRAFT_3808 0.79 +0.0 13,098 + EX28DRAFT_3808 0.79 -0.1 13,099 - EX28DRAFT_3808 0.79 +0.0 13,099 - EX28DRAFT_3808 0.79 +0.1 13,099 - EX28DRAFT_3808 0.79 -0.1 13,099 - EX28DRAFT_3808 0.79 +4.0 13,116 + EX28DRAFT_3808 0.82 +0.0 13,137 + EX28DRAFT_3808 0.85 -0.4 13,138 - EX28DRAFT_3808 0.85 +0.4 13,139 + EX28DRAFT_3808 0.85 +0.1 13,139 + EX28DRAFT_3808 0.85 -0.0 13,139 + EX28DRAFT_3808 0.85 +0.0 13,139 + EX28DRAFT_3808 0.85 +0.2 13,140 - EX28DRAFT_3808 0.85 +1.7 13,165 - EX28DRAFT_3808 0.89 -0.7 13,165 - EX28DRAFT_3808 0.89 -0.1 13,235 - +0.3 13,276 + -0.7 13,304 - -0.7 13,312 + +0.3 13,312 + +0.4 13,316 - +0.2 13,316 - -1.3 13,319 + -0.1 13,319 + +0.1 13,319 + +0.1 13,320 - -0.2 13,320 - +0.1 13,320 - +0.3 13,331 - -1.8 13,331 - +0.5 13,334 - -0.0 13,334 - +0.1 13,382 + -0.0 13,433 + -0.4 13,433 + +0.3 13,434 - +0.0 13,434 - -1.0 13,435 + -0.1 13,537 + EX28DRAFT_3809 0.24 -0.2 13,538 - EX28DRAFT_3809 0.24 -0.5 13,892 - EX28DRAFT_3809 0.85 +0.1 14,142 - EX28DRAFT_3810 0.42 +0.6 14,255 - EX28DRAFT_3810 0.67 -0.8 14,255 - EX28DRAFT_3810 0.67 -0.3 14,268 + EX28DRAFT_3810 0.70 -1.2 14,298 + EX28DRAFT_3810 0.77 +0.3 14,417 + +0.1 14,418 - +0.7 14,418 - +0.0 14,685 + EX28DRAFT_3811 0.14 +1.3 14,740 - EX28DRAFT_3811 0.16 -0.7 14,741 + EX28DRAFT_3811 0.16 -0.2 14,741 + EX28DRAFT_3811 0.16 -1.0 14,741 + EX28DRAFT_3811 0.16 -0.4 14,741 + EX28DRAFT_3811 0.16 -0.0 14,742 - EX28DRAFT_3811 0.16 -0.2 14,742 - EX28DRAFT_3811 0.16 +0.1 14,742 - EX28DRAFT_3811 0.16 +0.2 14,742 - EX28DRAFT_3811 0.16 +0.7 14,746 - EX28DRAFT_3811 0.16 +0.2 14,841 + EX28DRAFT_3811 0.20 +0.1 14,841 + EX28DRAFT_3811 0.20 +0.6 14,841 + EX28DRAFT_3811 0.20 +0.6 14,842 - EX28DRAFT_3811 0.20 +0.3 14,842 - EX28DRAFT_3811 0.20 -1.4 14,842 - EX28DRAFT_3811 0.20 -1.8 14,842 - EX28DRAFT_3811 0.20 +0.0 14,864 + EX28DRAFT_3811 0.21 -1.2 14,891 + EX28DRAFT_3811 0.23 +0.7 14,892 - EX28DRAFT_3811 0.23 -0.3 15,080 + EX28DRAFT_3811 0.31 +0.9 15,228 + EX28DRAFT_3811 0.37 +0.2 15,228 + EX28DRAFT_3811 0.37 +0.7 15,228 + EX28DRAFT_3811 0.37 -0.7 15,228 + EX28DRAFT_3811 0.37 +2.6 15,229 - EX28DRAFT_3811 0.37 +0.5 15,301 - EX28DRAFT_3811 0.40 +0.5
Or see this region's nucleotide sequence