Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3751 and EX28DRAFT_3752 are separated by 92 nucleotides EX28DRAFT_3752 and EX28DRAFT_3753 are separated by 111 nucleotides EX28DRAFT_3753 and EX28DRAFT_3754 are separated by 32 nucleotides
EX28DRAFT_3751: EX28DRAFT_3751 - Sugar diacid utilization regulator, at 431,141 to 432,298
_3751
EX28DRAFT_3752: EX28DRAFT_3752 - Protein of unknown function (DUF3461), at 432,391 to 432,777
_3752
EX28DRAFT_3753: EX28DRAFT_3753 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 432,889 to 433,713
_3753
EX28DRAFT_3754: EX28DRAFT_3754 - UTP--GlnB (protein PII) uridylyltransferase, GlnD, at 433,746 to 436,421
_3754
Position (kb) 432
433 Strain fitness (log2 ratio) -2
-1
0
1
2 at 431.468 kb on - strand, within EX28DRAFT_3751 at 431.558 kb on - strand, within EX28DRAFT_3751 at 431.575 kb on + strand, within EX28DRAFT_3751 at 431.575 kb on + strand, within EX28DRAFT_3751 at 431.576 kb on - strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.897 kb on + strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.898 kb on - strand, within EX28DRAFT_3751 at 431.990 kb on + strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 431.991 kb on - strand, within EX28DRAFT_3751 at 432.198 kb on - strand at 432.266 kb on + strand at 432.296 kb on + strand at 432.297 kb on - strand at 432.297 kb on - strand at 432.297 kb on - strand at 432.446 kb on - strand, within EX28DRAFT_3752 at 432.546 kb on - strand, within EX28DRAFT_3752 at 432.546 kb on - strand, within EX28DRAFT_3752 at 432.592 kb on + strand, within EX28DRAFT_3752 at 432.615 kb on + strand, within EX28DRAFT_3752 at 432.629 kb on + strand, within EX28DRAFT_3752 at 432.748 kb on - strand at 432.773 kb on + strand at 432.849 kb on + strand at 433.745 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 431,468 - EX28DRAFT_3751 0.28 -0.1 431,558 - EX28DRAFT_3751 0.36 -1.0 431,575 + EX28DRAFT_3751 0.37 +1.4 431,575 + EX28DRAFT_3751 0.37 -1.3 431,576 - EX28DRAFT_3751 0.38 +0.1 431,897 + EX28DRAFT_3751 0.65 +0.4 431,897 + EX28DRAFT_3751 0.65 -1.6 431,897 + EX28DRAFT_3751 0.65 -0.0 431,897 + EX28DRAFT_3751 0.65 -0.0 431,898 - EX28DRAFT_3751 0.65 +0.9 431,898 - EX28DRAFT_3751 0.65 -0.5 431,898 - EX28DRAFT_3751 0.65 -0.9 431,990 + EX28DRAFT_3751 0.73 +0.6 431,991 - EX28DRAFT_3751 0.73 -0.3 431,991 - EX28DRAFT_3751 0.73 +0.2 431,991 - EX28DRAFT_3751 0.73 +0.1 431,991 - EX28DRAFT_3751 0.73 -0.6 432,198 - +1.9 432,266 + +0.0 432,296 + -2.4 432,297 - +0.4 432,297 - +0.1 432,297 - +0.1 432,446 - EX28DRAFT_3752 0.14 -0.5 432,546 - EX28DRAFT_3752 0.40 +2.4 432,546 - EX28DRAFT_3752 0.40 +0.5 432,592 + EX28DRAFT_3752 0.52 +0.7 432,615 + EX28DRAFT_3752 0.58 +1.1 432,629 + EX28DRAFT_3752 0.61 +0.4 432,748 - -1.7 432,773 + -0.3 432,849 + -0.4 433,745 - +0.3
Or see this region's nucleotide sequence