Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3746 and EX28DRAFT_3747 are separated by 27 nucleotides EX28DRAFT_3747 and EX28DRAFT_3748 overlap by 8 nucleotides EX28DRAFT_3748 and EX28DRAFT_3749 are separated by 82 nucleotides
EX28DRAFT_3746: EX28DRAFT_3746 - Predicted membrane protein, at 425,687 to 426,310
_3746
EX28DRAFT_3747: EX28DRAFT_3747 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 426,338 to 427,138
_3747
EX28DRAFT_3748: EX28DRAFT_3748 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 427,131 to 427,829
_3748
EX28DRAFT_3749: EX28DRAFT_3749 - deoxyguanosinetriphosphate triphosphohydrolase, putative, at 427,912 to 429,426
_3749
Position (kb) 427
428 Strain fitness (log2 ratio) -2
-1
0
1 at 426.334 kb on + strand at 426.334 kb on + strand at 426.334 kb on + strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.388 kb on + strand at 426.389 kb on - strand at 426.438 kb on - strand, within EX28DRAFT_3747 at 426.444 kb on - strand, within EX28DRAFT_3747 at 426.676 kb on + strand, within EX28DRAFT_3747 at 426.685 kb on + strand, within EX28DRAFT_3747 at 426.711 kb on + strand, within EX28DRAFT_3747 at 426.763 kb on + strand, within EX28DRAFT_3747 at 426.766 kb on - strand, within EX28DRAFT_3747 at 426.834 kb on - strand, within EX28DRAFT_3747 at 426.994 kb on + strand, within EX28DRAFT_3747 at 426.995 kb on - strand, within EX28DRAFT_3747 at 427.039 kb on + strand, within EX28DRAFT_3747 at 427.040 kb on - strand, within EX28DRAFT_3747 at 427.057 kb on + strand, within EX28DRAFT_3747 at 427.078 kb on - strand at 427.078 kb on - strand at 427.126 kb on + strand at 427.127 kb on - strand at 427.133 kb on - strand at 427.855 kb on - strand at 427.864 kb on - strand at 427.868 kb on + strand at 428.002 kb on - strand at 428.146 kb on + strand, within EX28DRAFT_3749 at 428.146 kb on + strand, within EX28DRAFT_3749 at 428.148 kb on + strand, within EX28DRAFT_3749 at 428.200 kb on + strand, within EX28DRAFT_3749 at 428.201 kb on - strand, within EX28DRAFT_3749 at 428.201 kb on - strand, within EX28DRAFT_3749 at 428.332 kb on + strand, within EX28DRAFT_3749 at 428.348 kb on + strand, within EX28DRAFT_3749 at 428.545 kb on + strand, within EX28DRAFT_3749 at 428.594 kb on - strand, within EX28DRAFT_3749 at 428.594 kb on - strand, within EX28DRAFT_3749 at 428.617 kb on + strand, within EX28DRAFT_3749 at 428.618 kb on - strand, within EX28DRAFT_3749 at 428.637 kb on + strand, within EX28DRAFT_3749 at 428.701 kb on - strand, within EX28DRAFT_3749 at 428.718 kb on + strand, within EX28DRAFT_3749 at 428.719 kb on - strand, within EX28DRAFT_3749
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 426,334 + +0.2 426,334 + +1.2 426,334 + -1.1 426,335 - -0.1 426,335 - -0.0 426,335 - -1.5 426,335 - -1.5 426,335 - +0.4 426,388 + +0.0 426,389 - -0.3 426,438 - EX28DRAFT_3747 0.12 +0.9 426,444 - EX28DRAFT_3747 0.13 +0.3 426,676 + EX28DRAFT_3747 0.42 +0.7 426,685 + EX28DRAFT_3747 0.43 -0.1 426,711 + EX28DRAFT_3747 0.47 -0.8 426,763 + EX28DRAFT_3747 0.53 -0.9 426,766 - EX28DRAFT_3747 0.53 +0.1 426,834 - EX28DRAFT_3747 0.62 -1.4 426,994 + EX28DRAFT_3747 0.82 +0.1 426,995 - EX28DRAFT_3747 0.82 +0.4 427,039 + EX28DRAFT_3747 0.88 +0.2 427,040 - EX28DRAFT_3747 0.88 -0.3 427,057 + EX28DRAFT_3747 0.90 +0.2 427,078 - -0.0 427,078 - -0.3 427,126 + +0.7 427,127 - +0.0 427,133 - -0.9 427,855 - +0.5 427,864 - -0.0 427,868 + +0.3 428,002 - -0.2 428,146 + EX28DRAFT_3749 0.15 +0.3 428,146 + EX28DRAFT_3749 0.15 -0.5 428,148 + EX28DRAFT_3749 0.16 -0.1 428,200 + EX28DRAFT_3749 0.19 -2.3 428,201 - EX28DRAFT_3749 0.19 +0.3 428,201 - EX28DRAFT_3749 0.19 +0.1 428,332 + EX28DRAFT_3749 0.28 +0.0 428,348 + EX28DRAFT_3749 0.29 +0.4 428,545 + EX28DRAFT_3749 0.42 -0.6 428,594 - EX28DRAFT_3749 0.45 +1.0 428,594 - EX28DRAFT_3749 0.45 +1.1 428,617 + EX28DRAFT_3749 0.47 +0.8 428,618 - EX28DRAFT_3749 0.47 -0.0 428,637 + EX28DRAFT_3749 0.48 -0.1 428,701 - EX28DRAFT_3749 0.52 -0.4 428,718 + EX28DRAFT_3749 0.53 -1.2 428,719 - EX28DRAFT_3749 0.53 -0.1
Or see this region's nucleotide sequence