Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3606 and EX28DRAFT_3607 are separated by 211 nucleotides EX28DRAFT_3607 and EX28DRAFT_3608 are separated by 14 nucleotides EX28DRAFT_3608 and EX28DRAFT_3609 overlap by 1 nucleotides
EX28DRAFT_3606: EX28DRAFT_3606 - AraC-type DNA-binding domain-containing proteins, at 264,833 to 265,702
_3606
EX28DRAFT_3607: EX28DRAFT_3607 - Uncharacterized protein conserved in bacteria, at 265,914 to 266,384
_3607
EX28DRAFT_3608: EX28DRAFT_3608 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 266,399 to 267,088
_3608
EX28DRAFT_3609: EX28DRAFT_3609 - Signal transduction histidine kinase, at 267,088 to 268,512
_3609
Position (kb) 265
266
267 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 265.072 kb on + strand, within EX28DRAFT_3606 at 265.072 kb on + strand, within EX28DRAFT_3606 at 265.073 kb on - strand, within EX28DRAFT_3606 at 265.075 kb on - strand, within EX28DRAFT_3606 at 265.111 kb on - strand, within EX28DRAFT_3606 at 265.269 kb on + strand, within EX28DRAFT_3606 at 265.269 kb on + strand, within EX28DRAFT_3606 at 265.270 kb on - strand, within EX28DRAFT_3606 at 265.270 kb on - strand, within EX28DRAFT_3606 at 265.270 kb on - strand, within EX28DRAFT_3606 at 265.270 kb on - strand, within EX28DRAFT_3606 at 265.320 kb on + strand, within EX28DRAFT_3606 at 265.527 kb on - strand, within EX28DRAFT_3606 at 265.543 kb on + strand, within EX28DRAFT_3606 at 265.544 kb on - strand, within EX28DRAFT_3606 at 265.545 kb on + strand, within EX28DRAFT_3606 at 265.546 kb on - strand, within EX28DRAFT_3606 at 265.546 kb on - strand, within EX28DRAFT_3606 at 265.546 kb on - strand, within EX28DRAFT_3606 at 265.702 kb on + strand at 265.702 kb on + strand at 265.702 kb on + strand at 265.702 kb on + strand at 265.703 kb on - strand at 265.703 kb on - strand at 265.703 kb on - strand at 265.703 kb on - strand at 265.703 kb on - strand at 265.703 kb on - strand at 265.703 kb on - strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.704 kb on + strand at 265.705 kb on - strand at 265.705 kb on - strand at 265.705 kb on - strand at 265.705 kb on - strand at 265.705 kb on - strand at 265.705 kb on - strand at 265.705 kb on - strand at 265.719 kb on + strand at 265.719 kb on + strand at 265.719 kb on + strand at 265.756 kb on + strand at 265.831 kb on - strand at 265.832 kb on + strand at 265.837 kb on + strand at 265.866 kb on + strand at 266.079 kb on + strand, within EX28DRAFT_3607 at 266.196 kb on - strand, within EX28DRAFT_3607 at 266.224 kb on + strand, within EX28DRAFT_3607 at 266.277 kb on + strand, within EX28DRAFT_3607 at 266.277 kb on + strand, within EX28DRAFT_3607 at 266.277 kb on + strand, within EX28DRAFT_3607 at 266.277 kb on + strand, within EX28DRAFT_3607 at 266.277 kb on + strand, within EX28DRAFT_3607 at 266.305 kb on - strand, within EX28DRAFT_3607 at 266.330 kb on - strand, within EX28DRAFT_3607 at 266.370 kb on - strand at 266.382 kb on + strand at 266.382 kb on + strand at 266.459 kb on + strand at 266.460 kb on - strand at 266.460 kb on - strand at 266.662 kb on - strand, within EX28DRAFT_3608 at 266.699 kb on + strand, within EX28DRAFT_3608 at 266.699 kb on + strand, within EX28DRAFT_3608 at 266.700 kb on - strand, within EX28DRAFT_3608 at 266.700 kb on - strand, within EX28DRAFT_3608 at 266.946 kb on + strand, within EX28DRAFT_3608 at 267.068 kb on + strand at 267.069 kb on - strand at 267.176 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 265,072 + EX28DRAFT_3606 0.27 +0.6 265,072 + EX28DRAFT_3606 0.27 +1.4 265,073 - EX28DRAFT_3606 0.28 -0.1 265,075 - EX28DRAFT_3606 0.28 +0.6 265,111 - EX28DRAFT_3606 0.32 +1.5 265,269 + EX28DRAFT_3606 0.50 -0.6 265,269 + EX28DRAFT_3606 0.50 +0.8 265,270 - EX28DRAFT_3606 0.50 -1.0 265,270 - EX28DRAFT_3606 0.50 +0.7 265,270 - EX28DRAFT_3606 0.50 -0.4 265,270 - EX28DRAFT_3606 0.50 +1.2 265,320 + EX28DRAFT_3606 0.56 +0.6 265,527 - EX28DRAFT_3606 0.80 +0.2 265,543 + EX28DRAFT_3606 0.82 -0.4 265,544 - EX28DRAFT_3606 0.82 -0.5 265,545 + EX28DRAFT_3606 0.82 -0.1 265,546 - EX28DRAFT_3606 0.82 +0.5 265,546 - EX28DRAFT_3606 0.82 +1.8 265,546 - EX28DRAFT_3606 0.82 +0.6 265,702 + +2.5 265,702 + -0.6 265,702 + +1.4 265,702 + +1.3 265,703 - +0.4 265,703 - -2.1 265,703 - +0.5 265,703 - +1.1 265,703 - -1.3 265,703 - +1.9 265,703 - +0.8 265,704 + -0.1 265,704 + +0.6 265,704 + -0.3 265,704 + +0.1 265,704 + +0.3 265,704 + +0.5 265,704 + +0.4 265,704 + -0.8 265,704 + +0.0 265,705 - -0.2 265,705 - -0.3 265,705 - +0.4 265,705 - +0.9 265,705 - +0.5 265,705 - +0.9 265,705 - +0.7 265,719 + -0.2 265,719 + +0.4 265,719 + -1.9 265,756 + +0.2 265,831 - +0.7 265,832 + -0.8 265,837 + +0.1 265,866 + +0.2 266,079 + EX28DRAFT_3607 0.35 +3.5 266,196 - EX28DRAFT_3607 0.60 +0.0 266,224 + EX28DRAFT_3607 0.66 +0.0 266,277 + EX28DRAFT_3607 0.77 -0.5 266,277 + EX28DRAFT_3607 0.77 +0.2 266,277 + EX28DRAFT_3607 0.77 +0.7 266,277 + EX28DRAFT_3607 0.77 -0.3 266,277 + EX28DRAFT_3607 0.77 -1.3 266,305 - EX28DRAFT_3607 0.83 +0.3 266,330 - EX28DRAFT_3607 0.88 +0.2 266,370 - -0.1 266,382 + -0.6 266,382 + -0.5 266,459 + +0.2 266,460 - +0.5 266,460 - +0.2 266,662 - EX28DRAFT_3608 0.38 -0.7 266,699 + EX28DRAFT_3608 0.43 +0.1 266,699 + EX28DRAFT_3608 0.43 +0.3 266,700 - EX28DRAFT_3608 0.44 -0.4 266,700 - EX28DRAFT_3608 0.44 +0.1 266,946 + EX28DRAFT_3608 0.79 -0.2 267,068 + -0.4 267,069 - +0.0 267,176 + +1.2
Or see this region's nucleotide sequence