Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3507 and EX28DRAFT_3508 are separated by 185 nucleotides EX28DRAFT_3508 and EX28DRAFT_3509 are separated by 88 nucleotides EX28DRAFT_3509 and EX28DRAFT_3510 are separated by 135 nucleotides
EX28DRAFT_3507: EX28DRAFT_3507 - Response regulator, at 173,323 to 173,922
_3507
EX28DRAFT_3508: EX28DRAFT_3508 - Lactoylglutathione lyase and related lyases, at 174,108 to 174,494
_3508
EX28DRAFT_3509: EX28DRAFT_3509 - Protease subunit of ATP-dependent Clp proteases, at 174,583 to 175,185
_3509
EX28DRAFT_3510: EX28DRAFT_3510 - Uncharacterized conserved protein, at 175,321 to 176,442
_3510
Position (kb) 174
175
176 Strain fitness (log2 ratio) -2
-1
0
1 at 173.906 kb on + strand at 173.906 kb on + strand at 173.906 kb on + strand at 173.906 kb on + strand at 173.906 kb on + strand at 173.991 kb on + strand at 174.033 kb on + strand at 174.033 kb on + strand at 174.039 kb on + strand at 174.039 kb on + strand at 174.064 kb on - strand at 174.064 kb on - strand at 174.071 kb on + strand at 174.071 kb on + strand at 174.071 kb on + strand at 174.109 kb on + strand at 174.359 kb on + strand, within EX28DRAFT_3508 at 174.363 kb on - strand, within EX28DRAFT_3508 at 174.363 kb on - strand, within EX28DRAFT_3508 at 174.400 kb on + strand, within EX28DRAFT_3508 at 174.489 kb on - strand at 174.494 kb on + strand at 174.495 kb on - strand at 174.495 kb on - strand at 174.543 kb on + strand at 174.578 kb on + strand at 174.578 kb on + strand at 174.589 kb on + strand at 174.772 kb on + strand, within EX28DRAFT_3509 at 174.772 kb on + strand, within EX28DRAFT_3509 at 174.772 kb on + strand, within EX28DRAFT_3509 at 174.773 kb on - strand, within EX28DRAFT_3509 at 174.936 kb on + strand, within EX28DRAFT_3509 at 175.235 kb on - strand at 175.284 kb on - strand at 175.285 kb on + strand at 175.285 kb on + strand at 175.590 kb on + strand, within EX28DRAFT_3510 at 175.590 kb on + strand, within EX28DRAFT_3510 at 175.590 kb on + strand, within EX28DRAFT_3510 at 175.591 kb on - strand, within EX28DRAFT_3510 at 175.858 kb on + strand, within EX28DRAFT_3510 at 175.859 kb on - strand, within EX28DRAFT_3510 at 175.859 kb on - strand, within EX28DRAFT_3510 at 175.913 kb on - strand, within EX28DRAFT_3510 at 176.054 kb on - strand, within EX28DRAFT_3510 at 176.054 kb on - strand, within EX28DRAFT_3510
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 173,906 + +0.3 173,906 + +0.2 173,906 + +1.0 173,906 + -0.5 173,906 + -0.8 173,991 + +0.6 174,033 + -0.6 174,033 + +1.3 174,039 + -0.1 174,039 + -0.6 174,064 - +0.3 174,064 - -0.1 174,071 + +0.1 174,071 + +0.0 174,071 + +0.9 174,109 + -0.5 174,359 + EX28DRAFT_3508 0.65 +0.5 174,363 - EX28DRAFT_3508 0.66 -0.0 174,363 - EX28DRAFT_3508 0.66 +0.8 174,400 + EX28DRAFT_3508 0.75 +0.0 174,489 - -0.0 174,494 + -0.7 174,495 - +0.1 174,495 - +0.4 174,543 + +0.3 174,578 + -0.8 174,578 + +0.1 174,589 + -0.7 174,772 + EX28DRAFT_3509 0.31 +0.6 174,772 + EX28DRAFT_3509 0.31 +0.6 174,772 + EX28DRAFT_3509 0.31 -0.7 174,773 - EX28DRAFT_3509 0.32 +0.0 174,936 + EX28DRAFT_3509 0.59 -1.9 175,235 - +0.2 175,284 - -0.2 175,285 + +0.1 175,285 + +0.3 175,590 + EX28DRAFT_3510 0.24 +0.2 175,590 + EX28DRAFT_3510 0.24 +0.3 175,590 + EX28DRAFT_3510 0.24 +0.1 175,591 - EX28DRAFT_3510 0.24 +0.7 175,858 + EX28DRAFT_3510 0.48 +0.1 175,859 - EX28DRAFT_3510 0.48 -0.2 175,859 - EX28DRAFT_3510 0.48 -0.5 175,913 - EX28DRAFT_3510 0.53 -0.3 176,054 - EX28DRAFT_3510 0.65 -0.3 176,054 - EX28DRAFT_3510 0.65 +0.3
Or see this region's nucleotide sequence