Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3424 and EX28DRAFT_3425 are separated by 10 nucleotides EX28DRAFT_3425 and EX28DRAFT_3426 are separated by 2 nucleotides EX28DRAFT_3426 and EX28DRAFT_3427 are separated by 22 nucleotides EX28DRAFT_3427 and EX28DRAFT_3428 are separated by 13 nucleotides
EX28DRAFT_3424: EX28DRAFT_3424 - PRD domain protein EF_0829/AHA_3910, at 95,785 to 96,105
_3424
EX28DRAFT_3425: EX28DRAFT_3425 - conserved hypothetical protein EF_0830/AHA_3911, at 96,116 to 96,478
_3425
EX28DRAFT_3426: EX28DRAFT_3426 - conserved hypothetical protein EF_0831/AHA_3912, at 96,481 to 96,780
_3426
EX28DRAFT_3427: EX28DRAFT_3427 - conserved hypothetical protein EF_0832/AHA_3913, at 96,803 to 97,579
_3427
EX28DRAFT_3428: EX28DRAFT_3428 - conserved hypothetical protein EF_0833/AHA_3914, at 97,593 to 98,234
_3428
Position (kb) 96
97 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 95.516 kb on - strand at 95.519 kb on + strand at 95.520 kb on - strand at 95.597 kb on + strand at 95.629 kb on - strand at 95.648 kb on + strand at 95.649 kb on - strand at 95.649 kb on - strand at 95.708 kb on + strand at 95.835 kb on + strand, within EX28DRAFT_3424 at 95.835 kb on + strand, within EX28DRAFT_3424 at 95.835 kb on + strand, within EX28DRAFT_3424 at 95.851 kb on + strand, within EX28DRAFT_3424 at 95.851 kb on + strand, within EX28DRAFT_3424 at 95.891 kb on + strand, within EX28DRAFT_3424 at 96.127 kb on + strand at 96.128 kb on - strand at 96.326 kb on + strand, within EX28DRAFT_3425 at 96.333 kb on - strand, within EX28DRAFT_3425 at 96.333 kb on - strand, within EX28DRAFT_3425 at 96.344 kb on + strand, within EX28DRAFT_3425 at 96.415 kb on + strand, within EX28DRAFT_3425 at 96.447 kb on + strand at 96.448 kb on - strand at 96.476 kb on + strand at 96.476 kb on + strand at 96.476 kb on + strand at 96.742 kb on - strand, within EX28DRAFT_3426 at 96.782 kb on + strand at 96.789 kb on - strand at 96.810 kb on + strand at 96.811 kb on - strand at 96.811 kb on - strand at 96.822 kb on + strand at 97.528 kb on + strand at 97.529 kb on - strand at 97.577 kb on + strand at 97.578 kb on - strand at 97.590 kb on + strand at 97.590 kb on + strand at 97.591 kb on - strand at 97.591 kb on - strand at 97.604 kb on + strand at 97.604 kb on + strand at 97.605 kb on - strand at 97.618 kb on - strand at 97.686 kb on + strand, within EX28DRAFT_3428 at 97.686 kb on + strand, within EX28DRAFT_3428 at 97.686 kb on + strand, within EX28DRAFT_3428 at 97.686 kb on + strand, within EX28DRAFT_3428 at 97.687 kb on - strand, within EX28DRAFT_3428 at 97.687 kb on - strand, within EX28DRAFT_3428 at 97.689 kb on + strand, within EX28DRAFT_3428 at 97.689 kb on + strand, within EX28DRAFT_3428 at 97.690 kb on - strand, within EX28DRAFT_3428 at 97.690 kb on - strand, within EX28DRAFT_3428
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 95,516 - -0.4 95,519 + +0.2 95,520 - +0.4 95,597 + -0.3 95,629 - -0.3 95,648 + +0.2 95,649 - +0.0 95,649 - +0.0 95,708 + -0.4 95,835 + EX28DRAFT_3424 0.16 -0.6 95,835 + EX28DRAFT_3424 0.16 +0.3 95,835 + EX28DRAFT_3424 0.16 +0.5 95,851 + EX28DRAFT_3424 0.21 +0.3 95,851 + EX28DRAFT_3424 0.21 +0.2 95,891 + EX28DRAFT_3424 0.33 -0.2 96,127 + -1.3 96,128 - +0.3 96,326 + EX28DRAFT_3425 0.58 +0.5 96,333 - EX28DRAFT_3425 0.60 -3.0 96,333 - EX28DRAFT_3425 0.60 +0.6 96,344 + EX28DRAFT_3425 0.63 -0.1 96,415 + EX28DRAFT_3425 0.82 -0.4 96,447 + -1.3 96,448 - -0.1 96,476 + +0.4 96,476 + -0.0 96,476 + -1.2 96,742 - EX28DRAFT_3426 0.87 -0.9 96,782 + +1.0 96,789 - -1.1 96,810 + +0.4 96,811 - -0.0 96,811 - -0.1 96,822 + -3.4 97,528 + -0.1 97,529 - -0.0 97,577 + +0.2 97,578 - +0.9 97,590 + +0.3 97,590 + +0.4 97,591 - -3.2 97,591 - -0.6 97,604 + +0.1 97,604 + -0.5 97,605 - -0.7 97,618 - +0.5 97,686 + EX28DRAFT_3428 0.14 -0.9 97,686 + EX28DRAFT_3428 0.14 -0.0 97,686 + EX28DRAFT_3428 0.14 +1.0 97,686 + EX28DRAFT_3428 0.14 +0.3 97,687 - EX28DRAFT_3428 0.15 +0.2 97,687 - EX28DRAFT_3428 0.15 -0.5 97,689 + EX28DRAFT_3428 0.15 +0.3 97,689 + EX28DRAFT_3428 0.15 -0.6 97,690 - EX28DRAFT_3428 0.15 +0.4 97,690 - EX28DRAFT_3428 0.15 -0.5
Or see this region's nucleotide sequence