Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3402 and EX28DRAFT_3403 are separated by 324 nucleotides EX28DRAFT_3403 and EX28DRAFT_3404 are separated by 72 nucleotides EX28DRAFT_3404 and EX28DRAFT_3405 are separated by 253 nucleotides
EX28DRAFT_3402: EX28DRAFT_3402 - conserved hypothetical protein YtfJ-family, TIGR01626, at 71,691 to 72,248
_3402
EX28DRAFT_3403: EX28DRAFT_3403 - Protein of unknown function (DUF1107), at 72,573 to 72,779
_3403
EX28DRAFT_3404: EX28DRAFT_3404 - Hemolysins and related proteins containing CBS domains, at 72,852 to 74,189
_3404
EX28DRAFT_3405: EX28DRAFT_3405 - methionine-S-sulfoxide reductase, at 74,443 to 75,084
_3405
Position (kb) 72
73
74
75 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 72.050 kb on + strand, within EX28DRAFT_3402 at 72.051 kb on - strand, within EX28DRAFT_3402 at 72.051 kb on - strand, within EX28DRAFT_3402 at 72.089 kb on + strand, within EX28DRAFT_3402 at 72.103 kb on + strand, within EX28DRAFT_3402 at 72.104 kb on - strand, within EX28DRAFT_3402 at 72.104 kb on - strand, within EX28DRAFT_3402 at 72.108 kb on - strand, within EX28DRAFT_3402 at 72.114 kb on - strand, within EX28DRAFT_3402 at 72.233 kb on + strand at 72.233 kb on + strand at 72.237 kb on - strand at 72.237 kb on - strand at 72.240 kb on + strand at 72.299 kb on + strand at 72.299 kb on + strand at 72.300 kb on - strand at 72.300 kb on - strand at 72.300 kb on - strand at 72.305 kb on + strand at 72.305 kb on + strand at 72.306 kb on - strand at 72.364 kb on + strand at 72.364 kb on + strand at 72.365 kb on - strand at 72.388 kb on + strand at 72.454 kb on - strand at 72.474 kb on + strand at 72.485 kb on + strand at 72.485 kb on + strand at 72.486 kb on - strand at 72.486 kb on - strand at 72.488 kb on - strand at 72.551 kb on - strand at 72.567 kb on - strand at 72.591 kb on + strand at 72.592 kb on - strand at 72.592 kb on - strand at 72.615 kb on + strand, within EX28DRAFT_3403 at 72.616 kb on - strand, within EX28DRAFT_3403 at 72.645 kb on + strand, within EX28DRAFT_3403 at 72.645 kb on + strand, within EX28DRAFT_3403 at 72.645 kb on + strand, within EX28DRAFT_3403 at 72.646 kb on - strand, within EX28DRAFT_3403 at 72.646 kb on - strand, within EX28DRAFT_3403 at 72.646 kb on - strand, within EX28DRAFT_3403 at 72.646 kb on - strand, within EX28DRAFT_3403 at 72.790 kb on - strand at 72.796 kb on + strand at 72.897 kb on + strand at 73.017 kb on - strand, within EX28DRAFT_3404 at 73.025 kb on + strand, within EX28DRAFT_3404 at 73.025 kb on + strand, within EX28DRAFT_3404 at 73.035 kb on - strand, within EX28DRAFT_3404 at 73.098 kb on + strand, within EX28DRAFT_3404 at 73.140 kb on - strand, within EX28DRAFT_3404 at 73.224 kb on - strand, within EX28DRAFT_3404 at 73.227 kb on - strand, within EX28DRAFT_3404 at 73.457 kb on + strand, within EX28DRAFT_3404 at 73.457 kb on + strand, within EX28DRAFT_3404 at 73.457 kb on + strand, within EX28DRAFT_3404 at 73.458 kb on - strand, within EX28DRAFT_3404 at 73.523 kb on + strand, within EX28DRAFT_3404 at 73.523 kb on + strand, within EX28DRAFT_3404 at 73.524 kb on - strand, within EX28DRAFT_3404 at 73.524 kb on - strand, within EX28DRAFT_3404 at 73.524 kb on - strand, within EX28DRAFT_3404 at 73.524 kb on - strand, within EX28DRAFT_3404 at 73.649 kb on - strand, within EX28DRAFT_3404 at 73.649 kb on - strand, within EX28DRAFT_3404 at 73.677 kb on - strand, within EX28DRAFT_3404 at 73.737 kb on + strand, within EX28DRAFT_3404 at 73.737 kb on + strand, within EX28DRAFT_3404 at 73.737 kb on + strand, within EX28DRAFT_3404 at 73.756 kb on + strand, within EX28DRAFT_3404 at 73.756 kb on + strand, within EX28DRAFT_3404 at 73.918 kb on + strand, within EX28DRAFT_3404 at 73.922 kb on + strand, within EX28DRAFT_3404 at 73.934 kb on + strand, within EX28DRAFT_3404 at 73.935 kb on - strand, within EX28DRAFT_3404 at 73.936 kb on + strand, within EX28DRAFT_3404 at 73.936 kb on + strand, within EX28DRAFT_3404 at 73.937 kb on - strand, within EX28DRAFT_3404 at 74.128 kb on + strand at 74.130 kb on + strand at 74.166 kb on + strand at 74.167 kb on - strand at 74.167 kb on - strand at 74.177 kb on + strand at 74.185 kb on - strand at 74.189 kb on + strand at 74.190 kb on - strand at 74.298 kb on + strand at 74.299 kb on - strand at 74.378 kb on + strand at 74.378 kb on + strand at 74.378 kb on + strand at 74.379 kb on - strand at 74.380 kb on + strand at 74.380 kb on + strand at 74.380 kb on + strand at 74.380 kb on + strand at 74.381 kb on - strand at 74.381 kb on - strand at 74.381 kb on - strand at 74.438 kb on - strand at 74.442 kb on - strand at 74.516 kb on + strand, within EX28DRAFT_3405 at 74.516 kb on + strand, within EX28DRAFT_3405 at 74.540 kb on + strand, within EX28DRAFT_3405 at 74.543 kb on + strand, within EX28DRAFT_3405 at 74.544 kb on - strand, within EX28DRAFT_3405 at 74.544 kb on - strand, within EX28DRAFT_3405 at 74.544 kb on - strand, within EX28DRAFT_3405 at 74.544 kb on - strand, within EX28DRAFT_3405 at 74.666 kb on + strand, within EX28DRAFT_3405 at 74.667 kb on - strand, within EX28DRAFT_3405 at 74.762 kb on + strand, within EX28DRAFT_3405 at 74.767 kb on - strand, within EX28DRAFT_3405 at 75.137 kb on - strand at 75.150 kb on - strand at 75.174 kb on + strand at 75.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 72,050 + EX28DRAFT_3402 0.64 -0.3 72,051 - EX28DRAFT_3402 0.65 -0.1 72,051 - EX28DRAFT_3402 0.65 -0.7 72,089 + EX28DRAFT_3402 0.71 +0.2 72,103 + EX28DRAFT_3402 0.74 -0.2 72,104 - EX28DRAFT_3402 0.74 +0.2 72,104 - EX28DRAFT_3402 0.74 -0.3 72,108 - EX28DRAFT_3402 0.75 +1.0 72,114 - EX28DRAFT_3402 0.76 +0.1 72,233 + -0.8 72,233 + -0.4 72,237 - +0.3 72,237 - +0.5 72,240 + +1.1 72,299 + -1.3 72,299 + -0.1 72,300 - -2.4 72,300 - -1.0 72,300 - +0.3 72,305 + -0.0 72,305 + -0.1 72,306 - -0.2 72,364 + -0.1 72,364 + -0.7 72,365 - +0.0 72,388 + -0.4 72,454 - +0.1 72,474 + +0.1 72,485 + +1.2 72,485 + +0.9 72,486 - -0.1 72,486 - +0.1 72,488 - -0.5 72,551 - -1.1 72,567 - -0.2 72,591 + -0.3 72,592 - +0.1 72,592 - -0.3 72,615 + EX28DRAFT_3403 0.20 -0.3 72,616 - EX28DRAFT_3403 0.21 -0.4 72,645 + EX28DRAFT_3403 0.35 -0.2 72,645 + EX28DRAFT_3403 0.35 +0.5 72,645 + EX28DRAFT_3403 0.35 -0.5 72,646 - EX28DRAFT_3403 0.35 -0.7 72,646 - EX28DRAFT_3403 0.35 -1.0 72,646 - EX28DRAFT_3403 0.35 +0.9 72,646 - EX28DRAFT_3403 0.35 +1.7 72,790 - +0.1 72,796 + -0.1 72,897 + +0.3 73,017 - EX28DRAFT_3404 0.12 -0.2 73,025 + EX28DRAFT_3404 0.13 -0.4 73,025 + EX28DRAFT_3404 0.13 +1.5 73,035 - EX28DRAFT_3404 0.14 -0.7 73,098 + EX28DRAFT_3404 0.18 -0.9 73,140 - EX28DRAFT_3404 0.22 -0.4 73,224 - EX28DRAFT_3404 0.28 -0.1 73,227 - EX28DRAFT_3404 0.28 -0.2 73,457 + EX28DRAFT_3404 0.45 -0.2 73,457 + EX28DRAFT_3404 0.45 -0.1 73,457 + EX28DRAFT_3404 0.45 +1.6 73,458 - EX28DRAFT_3404 0.45 -0.4 73,523 + EX28DRAFT_3404 0.50 -0.0 73,523 + EX28DRAFT_3404 0.50 -0.8 73,524 - EX28DRAFT_3404 0.50 +2.9 73,524 - EX28DRAFT_3404 0.50 +3.1 73,524 - EX28DRAFT_3404 0.50 -1.3 73,524 - EX28DRAFT_3404 0.50 -0.4 73,649 - EX28DRAFT_3404 0.60 -0.2 73,649 - EX28DRAFT_3404 0.60 +0.3 73,677 - EX28DRAFT_3404 0.62 +0.3 73,737 + EX28DRAFT_3404 0.66 -0.4 73,737 + EX28DRAFT_3404 0.66 -1.2 73,737 + EX28DRAFT_3404 0.66 -0.2 73,756 + EX28DRAFT_3404 0.68 -1.1 73,756 + EX28DRAFT_3404 0.68 +0.8 73,918 + EX28DRAFT_3404 0.80 +0.8 73,922 + EX28DRAFT_3404 0.80 -1.3 73,934 + EX28DRAFT_3404 0.81 +0.8 73,935 - EX28DRAFT_3404 0.81 +0.0 73,936 + EX28DRAFT_3404 0.81 +0.5 73,936 + EX28DRAFT_3404 0.81 -0.0 73,937 - EX28DRAFT_3404 0.81 -1.4 74,128 + -0.9 74,130 + -0.9 74,166 + +0.1 74,167 - -0.9 74,167 - -1.7 74,177 + -0.1 74,185 - -0.8 74,189 + -0.2 74,190 - +0.3 74,298 + -0.2 74,299 - -0.0 74,378 + +0.2 74,378 + -0.1 74,378 + -0.2 74,379 - -0.0 74,380 + +0.1 74,380 + -0.3 74,380 + -0.6 74,380 + +0.2 74,381 - -0.0 74,381 - +0.1 74,381 - +0.2 74,438 - +1.3 74,442 - -0.0 74,516 + EX28DRAFT_3405 0.11 -0.0 74,516 + EX28DRAFT_3405 0.11 -0.7 74,540 + EX28DRAFT_3405 0.15 -2.0 74,543 + EX28DRAFT_3405 0.16 +1.6 74,544 - EX28DRAFT_3405 0.16 -0.8 74,544 - EX28DRAFT_3405 0.16 +0.2 74,544 - EX28DRAFT_3405 0.16 +2.1 74,544 - EX28DRAFT_3405 0.16 +0.0 74,666 + EX28DRAFT_3405 0.35 +0.4 74,667 - EX28DRAFT_3405 0.35 -0.3 74,762 + EX28DRAFT_3405 0.50 -1.6 74,767 - EX28DRAFT_3405 0.50 -0.3 75,137 - +0.7 75,150 - -2.9 75,174 + +3.5 75,188 - -0.4
Or see this region's nucleotide sequence