Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2632 and EX28DRAFT_2633 overlap by 11 nucleotides EX28DRAFT_2633 and EX28DRAFT_2634 are separated by 187 nucleotides
EX28DRAFT_2632: EX28DRAFT_2632 - Major Facilitator Superfamily, at 2,671,143 to 2,672,324
_2632
EX28DRAFT_2633: EX28DRAFT_2633 - Uncharacterised nucleotidyltransferase, at 2,672,314 to 2,673,429
_2633
EX28DRAFT_2634: EX28DRAFT_2634 - hypothetical protein, at 2,673,617 to 2,674,966
_2634
Position (kb)
2672
2673
2674 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2671.340 kb on + strand, within EX28DRAFT_2632 at 2671.364 kb on + strand, within EX28DRAFT_2632 at 2671.367 kb on - strand, within EX28DRAFT_2632 at 2671.412 kb on + strand, within EX28DRAFT_2632 at 2671.412 kb on + strand, within EX28DRAFT_2632 at 2671.413 kb on - strand, within EX28DRAFT_2632 at 2671.413 kb on - strand, within EX28DRAFT_2632 at 2671.414 kb on + strand, within EX28DRAFT_2632 at 2671.415 kb on - strand, within EX28DRAFT_2632 at 2671.425 kb on + strand, within EX28DRAFT_2632 at 2671.435 kb on + strand, within EX28DRAFT_2632 at 2671.436 kb on - strand, within EX28DRAFT_2632 at 2671.440 kb on - strand, within EX28DRAFT_2632 at 2671.440 kb on - strand, within EX28DRAFT_2632 at 2671.440 kb on - strand, within EX28DRAFT_2632 at 2671.442 kb on + strand, within EX28DRAFT_2632 at 2671.458 kb on + strand, within EX28DRAFT_2632 at 2671.479 kb on - strand, within EX28DRAFT_2632 at 2671.491 kb on + strand, within EX28DRAFT_2632 at 2671.491 kb on + strand, within EX28DRAFT_2632 at 2671.491 kb on + strand, within EX28DRAFT_2632 at 2671.529 kb on + strand, within EX28DRAFT_2632 at 2671.779 kb on - strand, within EX28DRAFT_2632 at 2671.779 kb on - strand, within EX28DRAFT_2632 at 2671.849 kb on + strand, within EX28DRAFT_2632 at 2671.850 kb on - strand, within EX28DRAFT_2632 at 2671.937 kb on + strand, within EX28DRAFT_2632 at 2671.938 kb on - strand, within EX28DRAFT_2632 at 2671.998 kb on + strand, within EX28DRAFT_2632 at 2672.011 kb on - strand, within EX28DRAFT_2632 at 2672.162 kb on + strand, within EX28DRAFT_2632 at 2672.200 kb on - strand, within EX28DRAFT_2632 at 2672.201 kb on + strand, within EX28DRAFT_2632 at 2672.202 kb on - strand, within EX28DRAFT_2632 at 2672.202 kb on - strand, within EX28DRAFT_2632 at 2672.203 kb on + strand, within EX28DRAFT_2632 at 2672.203 kb on + strand, within EX28DRAFT_2632 at 2672.204 kb on - strand, within EX28DRAFT_2632 at 2672.204 kb on - strand, within EX28DRAFT_2632 at 2672.232 kb on + strand at 2672.233 kb on - strand at 2672.233 kb on - strand at 2672.236 kb on + strand at 2672.367 kb on + strand at 2672.433 kb on + strand, within EX28DRAFT_2633 at 2672.703 kb on - strand, within EX28DRAFT_2633 at 2673.178 kb on + strand, within EX28DRAFT_2633 at 2673.184 kb on - strand, within EX28DRAFT_2633 at 2673.209 kb on - strand, within EX28DRAFT_2633 at 2673.254 kb on + strand, within EX28DRAFT_2633 at 2673.255 kb on - strand, within EX28DRAFT_2633 at 2673.518 kb on + strand at 2673.785 kb on - strand, within EX28DRAFT_2634 at 2674.046 kb on + strand, within EX28DRAFT_2634 at 2674.050 kb on - strand, within EX28DRAFT_2634 at 2674.050 kb on - strand, within EX28DRAFT_2634 at 2674.082 kb on - strand, within EX28DRAFT_2634 at 2674.100 kb on + strand, within EX28DRAFT_2634 at 2674.219 kb on + strand, within EX28DRAFT_2634 at 2674.343 kb on + strand, within EX28DRAFT_2634 at 2674.343 kb on + strand, within EX28DRAFT_2634 at 2674.343 kb on + strand, within EX28DRAFT_2634 at 2674.344 kb on - strand, within EX28DRAFT_2634 at 2674.354 kb on - strand, within EX28DRAFT_2634 at 2674.386 kb on + strand, within EX28DRAFT_2634 at 2674.387 kb on - strand, within EX28DRAFT_2634 at 2674.398 kb on + strand, within EX28DRAFT_2634 at 2674.399 kb on - strand, within EX28DRAFT_2634 at 2674.418 kb on - strand, within EX28DRAFT_2634 at 2674.418 kb on - strand, within EX28DRAFT_2634
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,671,340 + EX28DRAFT_2632 0.17 -0.5 2,671,364 + EX28DRAFT_2632 0.19 -0.0 2,671,367 - EX28DRAFT_2632 0.19 -0.7 2,671,412 + EX28DRAFT_2632 0.23 +0.1 2,671,412 + EX28DRAFT_2632 0.23 -1.6 2,671,413 - EX28DRAFT_2632 0.23 +0.3 2,671,413 - EX28DRAFT_2632 0.23 -0.5 2,671,414 + EX28DRAFT_2632 0.23 -0.6 2,671,415 - EX28DRAFT_2632 0.23 -0.8 2,671,425 + EX28DRAFT_2632 0.24 -1.6 2,671,435 + EX28DRAFT_2632 0.25 -0.6 2,671,436 - EX28DRAFT_2632 0.25 -1.1 2,671,440 - EX28DRAFT_2632 0.25 -0.6 2,671,440 - EX28DRAFT_2632 0.25 -2.0 2,671,440 - EX28DRAFT_2632 0.25 -1.6 2,671,442 + EX28DRAFT_2632 0.25 -2.1 2,671,458 + EX28DRAFT_2632 0.27 +1.0 2,671,479 - EX28DRAFT_2632 0.28 -1.2 2,671,491 + EX28DRAFT_2632 0.29 +1.3 2,671,491 + EX28DRAFT_2632 0.29 -0.5 2,671,491 + EX28DRAFT_2632 0.29 +0.2 2,671,529 + EX28DRAFT_2632 0.33 -0.6 2,671,779 - EX28DRAFT_2632 0.54 -2.0 2,671,779 - EX28DRAFT_2632 0.54 -1.5 2,671,849 + EX28DRAFT_2632 0.60 -0.5 2,671,850 - EX28DRAFT_2632 0.60 -4.6 2,671,937 + EX28DRAFT_2632 0.67 -1.7 2,671,938 - EX28DRAFT_2632 0.67 +2.5 2,671,998 + EX28DRAFT_2632 0.72 +0.1 2,672,011 - EX28DRAFT_2632 0.73 -2.4 2,672,162 + EX28DRAFT_2632 0.86 +0.6 2,672,200 - EX28DRAFT_2632 0.89 -3.0 2,672,201 + EX28DRAFT_2632 0.90 +1.5 2,672,202 - EX28DRAFT_2632 0.90 -2.3 2,672,202 - EX28DRAFT_2632 0.90 -0.4 2,672,203 + EX28DRAFT_2632 0.90 +0.4 2,672,203 + EX28DRAFT_2632 0.90 +0.2 2,672,204 - EX28DRAFT_2632 0.90 -1.1 2,672,204 - EX28DRAFT_2632 0.90 -2.8 2,672,232 + +0.1 2,672,233 - -0.8 2,672,233 - -2.8 2,672,236 + +0.5 2,672,367 + -0.2 2,672,433 + EX28DRAFT_2633 0.11 +1.0 2,672,703 - EX28DRAFT_2633 0.35 -1.0 2,673,178 + EX28DRAFT_2633 0.77 -0.4 2,673,184 - EX28DRAFT_2633 0.78 -0.5 2,673,209 - EX28DRAFT_2633 0.80 +0.9 2,673,254 + EX28DRAFT_2633 0.84 +0.1 2,673,255 - EX28DRAFT_2633 0.84 +0.4 2,673,518 + -0.2 2,673,785 - EX28DRAFT_2634 0.12 -1.0 2,674,046 + EX28DRAFT_2634 0.32 -0.3 2,674,050 - EX28DRAFT_2634 0.32 -0.8 2,674,050 - EX28DRAFT_2634 0.32 -0.7 2,674,082 - EX28DRAFT_2634 0.34 -0.3 2,674,100 + EX28DRAFT_2634 0.36 -0.1 2,674,219 + EX28DRAFT_2634 0.45 -0.3 2,674,343 + EX28DRAFT_2634 0.54 +0.2 2,674,343 + EX28DRAFT_2634 0.54 +0.2 2,674,343 + EX28DRAFT_2634 0.54 +0.6 2,674,344 - EX28DRAFT_2634 0.54 -1.4 2,674,354 - EX28DRAFT_2634 0.55 -1.4 2,674,386 + EX28DRAFT_2634 0.57 +0.3 2,674,387 - EX28DRAFT_2634 0.57 -1.9 2,674,398 + EX28DRAFT_2634 0.58 +0.4 2,674,399 - EX28DRAFT_2634 0.58 -1.8 2,674,418 - EX28DRAFT_2634 0.59 -4.2 2,674,418 - EX28DRAFT_2634 0.59 -1.5
Or see this region's nucleotide sequence