Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2563 and EX28DRAFT_2564 are separated by 60 nucleotides EX28DRAFT_2564 and EX28DRAFT_2565 are separated by 22 nucleotides EX28DRAFT_2565 and EX28DRAFT_2566 are separated by 53 nucleotides
EX28DRAFT_2563: EX28DRAFT_2563 - protein-export membrane protein, SecD/SecF family, at 2,593,631 to 2,595,445
_2563
EX28DRAFT_2564: EX28DRAFT_2564 - preprotein translocase, YajC subunit, at 2,595,506 to 2,595,838
_2564
EX28DRAFT_2565: EX28DRAFT_2565 - tRNA-guanine transglycosylase, at 2,595,861 to 2,596,988
_2565
EX28DRAFT_2566: EX28DRAFT_2566 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 2,597,042 to 2,598,112
_2566
Position (kb)
2595
2596
2597 Strain fitness (log2 ratio)
-2
-1
0
1 at 2595.854 kb on - strand at 2595.951 kb on - strand at 2596.073 kb on + strand, within EX28DRAFT_2565 at 2596.074 kb on - strand, within EX28DRAFT_2565 at 2596.075 kb on + strand, within EX28DRAFT_2565 at 2596.075 kb on + strand, within EX28DRAFT_2565 at 2596.076 kb on - strand, within EX28DRAFT_2565 at 2596.076 kb on - strand, within EX28DRAFT_2565 at 2596.076 kb on - strand, within EX28DRAFT_2565 at 2596.115 kb on + strand, within EX28DRAFT_2565 at 2596.205 kb on + strand, within EX28DRAFT_2565 at 2596.205 kb on + strand, within EX28DRAFT_2565 at 2596.206 kb on - strand, within EX28DRAFT_2565 at 2596.206 kb on - strand, within EX28DRAFT_2565 at 2596.264 kb on + strand, within EX28DRAFT_2565 at 2596.265 kb on - strand, within EX28DRAFT_2565 at 2596.375 kb on - strand, within EX28DRAFT_2565 at 2596.553 kb on + strand, within EX28DRAFT_2565 at 2596.662 kb on + strand, within EX28DRAFT_2565 at 2596.851 kb on + strand, within EX28DRAFT_2565 at 2597.025 kb on - strand at 2597.079 kb on + strand at 2597.080 kb on - strand at 2597.130 kb on - strand at 2597.142 kb on + strand at 2597.142 kb on + strand at 2597.142 kb on + strand at 2597.143 kb on - strand at 2597.188 kb on + strand, within EX28DRAFT_2566 at 2597.263 kb on + strand, within EX28DRAFT_2566 at 2597.264 kb on - strand, within EX28DRAFT_2566 at 2597.427 kb on + strand, within EX28DRAFT_2566 at 2597.608 kb on - strand, within EX28DRAFT_2566 at 2597.659 kb on - strand, within EX28DRAFT_2566 at 2597.831 kb on - strand, within EX28DRAFT_2566 at 2597.843 kb on - strand, within EX28DRAFT_2566 at 2597.843 kb on - strand, within EX28DRAFT_2566 at 2597.843 kb on - strand, within EX28DRAFT_2566 at 2597.860 kb on + strand, within EX28DRAFT_2566 at 2597.860 kb on + strand, within EX28DRAFT_2566 at 2597.899 kb on + strand, within EX28DRAFT_2566 at 2597.938 kb on + strand, within EX28DRAFT_2566
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,595,854 - -0.2 2,595,951 - -0.5 2,596,073 + EX28DRAFT_2565 0.19 -0.6 2,596,074 - EX28DRAFT_2565 0.19 +0.9 2,596,075 + EX28DRAFT_2565 0.19 -1.3 2,596,075 + EX28DRAFT_2565 0.19 -0.3 2,596,076 - EX28DRAFT_2565 0.19 -1.7 2,596,076 - EX28DRAFT_2565 0.19 +0.6 2,596,076 - EX28DRAFT_2565 0.19 -1.4 2,596,115 + EX28DRAFT_2565 0.23 -0.7 2,596,205 + EX28DRAFT_2565 0.30 -1.6 2,596,205 + EX28DRAFT_2565 0.30 -0.9 2,596,206 - EX28DRAFT_2565 0.31 -0.1 2,596,206 - EX28DRAFT_2565 0.31 -1.6 2,596,264 + EX28DRAFT_2565 0.36 -1.1 2,596,265 - EX28DRAFT_2565 0.36 -0.5 2,596,375 - EX28DRAFT_2565 0.46 -2.4 2,596,553 + EX28DRAFT_2565 0.61 -1.0 2,596,662 + EX28DRAFT_2565 0.71 -1.1 2,596,851 + EX28DRAFT_2565 0.88 -0.7 2,597,025 - -1.0 2,597,079 + +1.1 2,597,080 - -0.5 2,597,130 - +0.9 2,597,142 + -0.3 2,597,142 + +0.9 2,597,142 + -0.1 2,597,143 - -1.0 2,597,188 + EX28DRAFT_2566 0.14 +0.1 2,597,263 + EX28DRAFT_2566 0.21 -0.1 2,597,264 - EX28DRAFT_2566 0.21 -1.0 2,597,427 + EX28DRAFT_2566 0.36 -1.6 2,597,608 - EX28DRAFT_2566 0.53 +0.3 2,597,659 - EX28DRAFT_2566 0.58 -0.6 2,597,831 - EX28DRAFT_2566 0.74 +0.8 2,597,843 - EX28DRAFT_2566 0.75 -0.3 2,597,843 - EX28DRAFT_2566 0.75 -1.5 2,597,843 - EX28DRAFT_2566 0.75 -1.6 2,597,860 + EX28DRAFT_2566 0.76 -0.3 2,597,860 + EX28DRAFT_2566 0.76 +0.8 2,597,899 + EX28DRAFT_2566 0.80 -0.3 2,597,938 + EX28DRAFT_2566 0.84 -0.5
Or see this region's nucleotide sequence