Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2451 and EX28DRAFT_2452 are separated by 86 nucleotides EX28DRAFT_2452 and EX28DRAFT_2453 are separated by 74 nucleotides EX28DRAFT_2453 and EX28DRAFT_2454 are separated by 92 nucleotides
EX28DRAFT_2451: EX28DRAFT_2451 - PTS system, glucose-like IIB component, at 2,481,290 to 2,482,789
_2451
EX28DRAFT_2452: EX28DRAFT_2452 - transcriptional regulator, LacI family, at 2,482,876 to 2,483,892
_2452
EX28DRAFT_2453: EX28DRAFT_2453 - Predicted membrane-bound metal-dependent hydrolases, at 2,483,967 to 2,484,488
_2453
EX28DRAFT_2454: EX28DRAFT_2454 - cysteinyl-tRNA synthetase (EC 6.1.1.16), at 2,484,581 to 2,485,966
_2454
Position (kb)
2482
2483
2484 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2481.972 kb on - strand, within EX28DRAFT_2451 at 2482.064 kb on + strand, within EX28DRAFT_2451 at 2482.064 kb on + strand, within EX28DRAFT_2451 at 2482.142 kb on + strand, within EX28DRAFT_2451 at 2482.243 kb on + strand, within EX28DRAFT_2451 at 2482.304 kb on + strand, within EX28DRAFT_2451 at 2482.304 kb on + strand, within EX28DRAFT_2451 at 2482.305 kb on - strand, within EX28DRAFT_2451 at 2482.305 kb on - strand, within EX28DRAFT_2451 at 2482.305 kb on - strand, within EX28DRAFT_2451 at 2482.316 kb on + strand, within EX28DRAFT_2451 at 2482.316 kb on + strand, within EX28DRAFT_2451 at 2482.316 kb on + strand, within EX28DRAFT_2451 at 2482.316 kb on + strand, within EX28DRAFT_2451 at 2482.317 kb on - strand, within EX28DRAFT_2451 at 2482.317 kb on - strand, within EX28DRAFT_2451 at 2482.367 kb on + strand, within EX28DRAFT_2451 at 2482.458 kb on - strand, within EX28DRAFT_2451 at 2482.787 kb on + strand at 2482.790 kb on + strand at 2482.791 kb on - strand at 2482.791 kb on - strand at 2483.014 kb on + strand, within EX28DRAFT_2452 at 2483.022 kb on + strand, within EX28DRAFT_2452 at 2483.149 kb on + strand, within EX28DRAFT_2452 at 2483.151 kb on + strand, within EX28DRAFT_2452 at 2483.152 kb on - strand, within EX28DRAFT_2452 at 2483.214 kb on + strand, within EX28DRAFT_2452 at 2483.243 kb on - strand, within EX28DRAFT_2452 at 2483.392 kb on + strand, within EX28DRAFT_2452 at 2483.426 kb on - strand, within EX28DRAFT_2452 at 2483.521 kb on + strand, within EX28DRAFT_2452 at 2483.724 kb on + strand, within EX28DRAFT_2452 at 2483.725 kb on - strand, within EX28DRAFT_2452 at 2483.725 kb on - strand, within EX28DRAFT_2452 at 2483.761 kb on + strand, within EX28DRAFT_2452 at 2483.762 kb on - strand, within EX28DRAFT_2452 at 2483.762 kb on - strand, within EX28DRAFT_2452 at 2483.762 kb on - strand, within EX28DRAFT_2452 at 2483.762 kb on - strand, within EX28DRAFT_2452 at 2483.937 kb on + strand at 2483.981 kb on + strand at 2484.014 kb on - strand at 2484.172 kb on + strand, within EX28DRAFT_2453 at 2484.172 kb on + strand, within EX28DRAFT_2453 at 2484.360 kb on - strand, within EX28DRAFT_2453 at 2484.388 kb on - strand, within EX28DRAFT_2453 at 2484.487 kb on - strand at 2484.582 kb on + strand at 2484.583 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,481,972 - EX28DRAFT_2451 0.45 -0.7 2,482,064 + EX28DRAFT_2451 0.52 -0.0 2,482,064 + EX28DRAFT_2451 0.52 -0.0 2,482,142 + EX28DRAFT_2451 0.57 -0.3 2,482,243 + EX28DRAFT_2451 0.64 -0.7 2,482,304 + EX28DRAFT_2451 0.68 +1.0 2,482,304 + EX28DRAFT_2451 0.68 +0.8 2,482,305 - EX28DRAFT_2451 0.68 -0.5 2,482,305 - EX28DRAFT_2451 0.68 -1.0 2,482,305 - EX28DRAFT_2451 0.68 -0.8 2,482,316 + EX28DRAFT_2451 0.68 +0.1 2,482,316 + EX28DRAFT_2451 0.68 +0.9 2,482,316 + EX28DRAFT_2451 0.68 -0.1 2,482,316 + EX28DRAFT_2451 0.68 +0.6 2,482,317 - EX28DRAFT_2451 0.68 -0.0 2,482,317 - EX28DRAFT_2451 0.68 -0.0 2,482,367 + EX28DRAFT_2451 0.72 -1.8 2,482,458 - EX28DRAFT_2451 0.78 -0.2 2,482,787 + -0.4 2,482,790 + +0.3 2,482,791 - -0.1 2,482,791 - -0.2 2,483,014 + EX28DRAFT_2452 0.14 +0.1 2,483,022 + EX28DRAFT_2452 0.14 +0.7 2,483,149 + EX28DRAFT_2452 0.27 -0.2 2,483,151 + EX28DRAFT_2452 0.27 +1.2 2,483,152 - EX28DRAFT_2452 0.27 +0.2 2,483,214 + EX28DRAFT_2452 0.33 -0.6 2,483,243 - EX28DRAFT_2452 0.36 -0.2 2,483,392 + EX28DRAFT_2452 0.51 +0.2 2,483,426 - EX28DRAFT_2452 0.54 +0.2 2,483,521 + EX28DRAFT_2452 0.63 +1.8 2,483,724 + EX28DRAFT_2452 0.83 +0.8 2,483,725 - EX28DRAFT_2452 0.83 +0.3 2,483,725 - EX28DRAFT_2452 0.83 +1.8 2,483,761 + EX28DRAFT_2452 0.87 -0.4 2,483,762 - EX28DRAFT_2452 0.87 +0.4 2,483,762 - EX28DRAFT_2452 0.87 +0.2 2,483,762 - EX28DRAFT_2452 0.87 +1.8 2,483,762 - EX28DRAFT_2452 0.87 +0.9 2,483,937 + -2.2 2,483,981 + +0.1 2,484,014 - +0.0 2,484,172 + EX28DRAFT_2453 0.39 +0.6 2,484,172 + EX28DRAFT_2453 0.39 -0.5 2,484,360 - EX28DRAFT_2453 0.75 -1.3 2,484,388 - EX28DRAFT_2453 0.81 +0.4 2,484,487 - -1.2 2,484,582 + -0.6 2,484,583 - -1.7
Or see this region's nucleotide sequence