Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2042 and EX28DRAFT_2043 are separated by 135 nucleotides EX28DRAFT_2043 and EX28DRAFT_2044 are separated by 517 nucleotides
EX28DRAFT_2042: EX28DRAFT_2042 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 2,058,573 to 2,062,274
_2042
EX28DRAFT_2043: EX28DRAFT_2043 - transcriptional regulator, AsnC family, at 2,062,410 to 2,062,904
_2043
EX28DRAFT_2044: EX28DRAFT_2044 - thioredoxin-disulfide reductase, at 2,063,422 to 2,064,417
_2044
Position (kb)
2062
2063 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2062.385 kb on - strand at 2062.421 kb on + strand at 2062.422 kb on - strand at 2062.422 kb on - strand at 2062.422 kb on - strand at 2062.465 kb on + strand, within EX28DRAFT_2043 at 2062.465 kb on + strand, within EX28DRAFT_2043 at 2062.465 kb on + strand, within EX28DRAFT_2043 at 2062.466 kb on - strand, within EX28DRAFT_2043 at 2062.466 kb on - strand, within EX28DRAFT_2043 at 2062.466 kb on - strand, within EX28DRAFT_2043 at 2062.466 kb on - strand, within EX28DRAFT_2043 at 2062.665 kb on - strand, within EX28DRAFT_2043 at 2062.721 kb on + strand, within EX28DRAFT_2043 at 2062.721 kb on + strand, within EX28DRAFT_2043 at 2062.722 kb on - strand, within EX28DRAFT_2043 at 2062.724 kb on - strand, within EX28DRAFT_2043 at 2062.854 kb on - strand, within EX28DRAFT_2043 at 2062.896 kb on - strand at 2062.900 kb on - strand at 2062.900 kb on - strand at 2062.922 kb on - strand at 2063.006 kb on - strand at 2063.039 kb on - strand at 2063.077 kb on + strand at 2063.077 kb on + strand at 2063.078 kb on - strand at 2063.102 kb on - strand at 2063.102 kb on - strand at 2063.145 kb on - strand at 2063.154 kb on - strand at 2063.270 kb on - strand at 2063.290 kb on - strand at 2063.325 kb on - strand at 2063.409 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 2,062,385 - -0.3 2,062,421 + -0.6 2,062,422 - +0.8 2,062,422 - +0.4 2,062,422 - -0.0 2,062,465 + EX28DRAFT_2043 0.11 +0.3 2,062,465 + EX28DRAFT_2043 0.11 -3.0 2,062,465 + EX28DRAFT_2043 0.11 -4.8 2,062,466 - EX28DRAFT_2043 0.11 -0.7 2,062,466 - EX28DRAFT_2043 0.11 -1.3 2,062,466 - EX28DRAFT_2043 0.11 -1.7 2,062,466 - EX28DRAFT_2043 0.11 +1.9 2,062,665 - EX28DRAFT_2043 0.52 -1.6 2,062,721 + EX28DRAFT_2043 0.63 -2.2 2,062,721 + EX28DRAFT_2043 0.63 -2.2 2,062,722 - EX28DRAFT_2043 0.63 -1.7 2,062,724 - EX28DRAFT_2043 0.63 -2.0 2,062,854 - EX28DRAFT_2043 0.90 -3.4 2,062,896 - +0.9 2,062,900 - -2.5 2,062,900 - +1.1 2,062,922 - +0.5 2,063,006 - -2.9 2,063,039 - +0.3 2,063,077 + -3.7 2,063,077 + +0.8 2,063,078 - -0.0 2,063,102 - +0.7 2,063,102 - +0.8 2,063,145 - +0.5 2,063,154 - +0.6 2,063,270 - +0.3 2,063,290 - +0.2 2,063,325 - +0.6 2,063,409 - -0.4
Or see this region's nucleotide sequence