Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1311 and EX28DRAFT_1312 are separated by 185 nucleotides EX28DRAFT_1312 and EX28DRAFT_1313 are separated by 3 nucleotides EX28DRAFT_1313 and EX28DRAFT_1314 are separated by 109 nucleotides EX28DRAFT_1314 and EX28DRAFT_1315 are separated by 31 nucleotides
EX28DRAFT_1311: EX28DRAFT_1311 - phage replication protein O, at 1,315,432 to 1,316,397
_1311
EX28DRAFT_1312: EX28DRAFT_1312 - Protein of unknown function (DUF1019), at 1,316,583 to 1,317,125
_1312
EX28DRAFT_1313: EX28DRAFT_1313 - Cro, at 1,317,129 to 1,317,329
_1313
EX28DRAFT_1314: EX28DRAFT_1314 - SOS-response transcriptional repressors (RecA-mediated autopeptidases), at 1,317,439 to 1,318,155
_1314
EX28DRAFT_1315: EX28DRAFT_1315 - hypothetical protein, at 1,318,187 to 1,318,573
_1315
Position (kb) 1317
1318 Strain fitness (log2 ratio) -1
0
1
2 at 1316.191 kb on + strand, within EX28DRAFT_1311 at 1316.191 kb on + strand, within EX28DRAFT_1311 at 1316.191 kb on + strand, within EX28DRAFT_1311 at 1316.439 kb on - strand at 1316.458 kb on + strand at 1316.486 kb on + strand at 1316.661 kb on + strand, within EX28DRAFT_1312 at 1316.663 kb on + strand, within EX28DRAFT_1312 at 1316.673 kb on + strand, within EX28DRAFT_1312 at 1317.056 kb on + strand, within EX28DRAFT_1312 at 1317.056 kb on + strand, within EX28DRAFT_1312 at 1317.109 kb on + strand at 1317.152 kb on + strand, within EX28DRAFT_1313 at 1317.307 kb on + strand, within EX28DRAFT_1313 at 1317.368 kb on + strand at 1318.165 kb on - strand at 1318.271 kb on + strand, within EX28DRAFT_1315 at 1318.272 kb on - strand, within EX28DRAFT_1315 at 1318.272 kb on - strand, within EX28DRAFT_1315 at 1318.289 kb on + strand, within EX28DRAFT_1315
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,316,191 + EX28DRAFT_1311 0.79 +0.4 1,316,191 + EX28DRAFT_1311 0.79 -1.3 1,316,191 + EX28DRAFT_1311 0.79 +0.1 1,316,439 - -0.0 1,316,458 + -0.3 1,316,486 + +0.3 1,316,661 + EX28DRAFT_1312 0.14 -0.9 1,316,663 + EX28DRAFT_1312 0.15 +0.6 1,316,673 + EX28DRAFT_1312 0.17 -0.1 1,317,056 + EX28DRAFT_1312 0.87 +0.1 1,317,056 + EX28DRAFT_1312 0.87 +1.0 1,317,109 + +0.8 1,317,152 + EX28DRAFT_1313 0.11 -1.3 1,317,307 + EX28DRAFT_1313 0.89 -0.1 1,317,368 + +1.7 1,318,165 - -0.2 1,318,271 + EX28DRAFT_1315 0.22 +0.1 1,318,272 - EX28DRAFT_1315 0.22 -1.4 1,318,272 - EX28DRAFT_1315 0.22 +1.9 1,318,289 + EX28DRAFT_1315 0.26 -0.4
Or see this region's nucleotide sequence