Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1250 and EX28DRAFT_1251 are separated by 9 nucleotides EX28DRAFT_1251 and EX28DRAFT_1252 are separated by 132 nucleotides EX28DRAFT_1252 and EX28DRAFT_1253 are separated by 64 nucleotides
EX28DRAFT_1250: EX28DRAFT_1250 - Protein of unknown function (DUF421), at 1,267,400 to 1,267,846
_1250
EX28DRAFT_1251: EX28DRAFT_1251 - hypothetical protein, at 1,267,856 to 1,268,365
_1251
EX28DRAFT_1252: EX28DRAFT_1252 - TIGR00156 family protein, at 1,268,498 to 1,268,887
_1252
EX28DRAFT_1253: EX28DRAFT_1253 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,268,952 to 1,269,836
_1253
Position (kb)
1268
1269 Strain fitness (log2 ratio)
-1
0
1 at 1267.815 kb on + strand at 1267.820 kb on - strand at 1267.867 kb on + strand at 1267.990 kb on - strand, within EX28DRAFT_1251 at 1268.023 kb on + strand, within EX28DRAFT_1251 at 1268.024 kb on - strand, within EX28DRAFT_1251 at 1268.024 kb on - strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.094 kb on + strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.095 kb on - strand, within EX28DRAFT_1251 at 1268.166 kb on + strand, within EX28DRAFT_1251 at 1268.167 kb on - strand, within EX28DRAFT_1251 at 1268.171 kb on + strand, within EX28DRAFT_1251 at 1268.172 kb on - strand, within EX28DRAFT_1251 at 1268.272 kb on + strand, within EX28DRAFT_1251 at 1268.442 kb on + strand at 1268.466 kb on + strand at 1268.781 kb on + strand, within EX28DRAFT_1252 at 1268.951 kb on + strand at 1268.951 kb on + strand at 1268.964 kb on - strand at 1268.973 kb on - strand at 1268.973 kb on - strand at 1269.109 kb on + strand, within EX28DRAFT_1253 at 1269.110 kb on - strand, within EX28DRAFT_1253 at 1269.156 kb on + strand, within EX28DRAFT_1253 at 1269.185 kb on + strand, within EX28DRAFT_1253 at 1269.186 kb on - strand, within EX28DRAFT_1253 at 1269.190 kb on - strand, within EX28DRAFT_1253 at 1269.498 kb on - strand, within EX28DRAFT_1253 at 1269.500 kb on + strand, within EX28DRAFT_1253 at 1269.500 kb on + strand, within EX28DRAFT_1253 at 1269.500 kb on + strand, within EX28DRAFT_1253 at 1269.501 kb on - strand, within EX28DRAFT_1253 at 1269.501 kb on - strand, within EX28DRAFT_1253 at 1269.789 kb on - strand at 1269.835 kb on - strand at 1269.869 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,267,815 + +0.3 1,267,820 - +0.1 1,267,867 + +0.1 1,267,990 - EX28DRAFT_1251 0.26 -0.6 1,268,023 + EX28DRAFT_1251 0.33 +0.2 1,268,024 - EX28DRAFT_1251 0.33 -0.5 1,268,024 - EX28DRAFT_1251 0.33 -0.3 1,268,094 + EX28DRAFT_1251 0.47 -1.5 1,268,094 + EX28DRAFT_1251 0.47 +0.2 1,268,094 + EX28DRAFT_1251 0.47 -0.8 1,268,094 + EX28DRAFT_1251 0.47 +1.3 1,268,095 - EX28DRAFT_1251 0.47 -0.8 1,268,095 - EX28DRAFT_1251 0.47 +0.2 1,268,095 - EX28DRAFT_1251 0.47 +0.1 1,268,095 - EX28DRAFT_1251 0.47 -0.1 1,268,166 + EX28DRAFT_1251 0.61 +1.3 1,268,167 - EX28DRAFT_1251 0.61 +0.4 1,268,171 + EX28DRAFT_1251 0.62 +0.0 1,268,172 - EX28DRAFT_1251 0.62 -1.1 1,268,272 + EX28DRAFT_1251 0.82 +0.2 1,268,442 + +0.3 1,268,466 + -0.6 1,268,781 + EX28DRAFT_1252 0.73 -0.9 1,268,951 + +0.4 1,268,951 + -0.1 1,268,964 - -0.8 1,268,973 - -0.1 1,268,973 - +1.3 1,269,109 + EX28DRAFT_1253 0.18 +0.6 1,269,110 - EX28DRAFT_1253 0.18 +1.1 1,269,156 + EX28DRAFT_1253 0.23 +0.2 1,269,185 + EX28DRAFT_1253 0.26 +0.3 1,269,186 - EX28DRAFT_1253 0.26 -0.3 1,269,190 - EX28DRAFT_1253 0.27 +0.0 1,269,498 - EX28DRAFT_1253 0.62 -0.3 1,269,500 + EX28DRAFT_1253 0.62 -0.7 1,269,500 + EX28DRAFT_1253 0.62 +0.5 1,269,500 + EX28DRAFT_1253 0.62 +0.4 1,269,501 - EX28DRAFT_1253 0.62 +1.3 1,269,501 - EX28DRAFT_1253 0.62 -0.1 1,269,789 - -0.4 1,269,835 - +0.4 1,269,869 + -0.4
Or see this region's nucleotide sequence