Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1124 and EX28DRAFT_1125 are separated by 28 nucleotides EX28DRAFT_1125 and EX28DRAFT_1126 are separated by 89 nucleotides
EX28DRAFT_1124: EX28DRAFT_1124 - sucrose-6-phosphate hydrolase, at 1,138,530 to 1,139,936
_1124
EX28DRAFT_1125: EX28DRAFT_1125 - D-fructose-responsive transcription factor, at 1,139,965 to 1,140,981
_1125
EX28DRAFT_1126: EX28DRAFT_1126 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 1,141,071 to 1,142,621
_1126
Position (kb)
1139
1140
1141 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3 at 1138.989 kb on + strand, within EX28DRAFT_1124 at 1138.993 kb on - strand, within EX28DRAFT_1124 at 1139.040 kb on + strand, within EX28DRAFT_1124 at 1139.040 kb on + strand, within EX28DRAFT_1124 at 1139.040 kb on + strand, within EX28DRAFT_1124 at 1139.041 kb on - strand, within EX28DRAFT_1124 at 1139.041 kb on - strand, within EX28DRAFT_1124 at 1139.041 kb on - strand, within EX28DRAFT_1124 at 1139.041 kb on - strand, within EX28DRAFT_1124 at 1139.172 kb on + strand, within EX28DRAFT_1124 at 1139.172 kb on + strand, within EX28DRAFT_1124 at 1139.174 kb on + strand, within EX28DRAFT_1124 at 1139.174 kb on + strand, within EX28DRAFT_1124 at 1139.175 kb on - strand, within EX28DRAFT_1124 at 1139.175 kb on - strand, within EX28DRAFT_1124 at 1139.175 kb on - strand, within EX28DRAFT_1124 at 1139.175 kb on - strand, within EX28DRAFT_1124 at 1139.262 kb on + strand, within EX28DRAFT_1124 at 1139.503 kb on + strand, within EX28DRAFT_1124 at 1139.504 kb on - strand, within EX28DRAFT_1124 at 1139.504 kb on - strand, within EX28DRAFT_1124 at 1139.701 kb on + strand, within EX28DRAFT_1124 at 1139.701 kb on + strand, within EX28DRAFT_1124 at 1139.702 kb on - strand, within EX28DRAFT_1124 at 1139.702 kb on - strand, within EX28DRAFT_1124 at 1139.702 kb on - strand, within EX28DRAFT_1124 at 1139.900 kb on - strand at 1139.930 kb on - strand at 1139.956 kb on + strand at 1140.380 kb on - strand, within EX28DRAFT_1125 at 1140.523 kb on + strand, within EX28DRAFT_1125 at 1140.579 kb on + strand, within EX28DRAFT_1125 at 1140.579 kb on + strand, within EX28DRAFT_1125 at 1140.783 kb on + strand, within EX28DRAFT_1125 at 1140.812 kb on - strand, within EX28DRAFT_1125 at 1140.812 kb on - strand, within EX28DRAFT_1125 at 1140.964 kb on + strand at 1140.965 kb on - strand at 1140.965 kb on - strand at 1140.967 kb on - strand at 1140.979 kb on + strand at 1140.993 kb on - strand at 1141.000 kb on + strand at 1141.007 kb on - strand at 1141.236 kb on - strand, within EX28DRAFT_1126 at 1141.635 kb on - strand, within EX28DRAFT_1126 at 1141.794 kb on - strand, within EX28DRAFT_1126 at 1141.812 kb on - strand, within EX28DRAFT_1126 at 1141.812 kb on - strand, within EX28DRAFT_1126
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 1,138,989 + EX28DRAFT_1124 0.33 -4.0 1,138,993 - EX28DRAFT_1124 0.33 -2.5 1,139,040 + EX28DRAFT_1124 0.36 -2.1 1,139,040 + EX28DRAFT_1124 0.36 -2.6 1,139,040 + EX28DRAFT_1124 0.36 -3.6 1,139,041 - EX28DRAFT_1124 0.36 -1.6 1,139,041 - EX28DRAFT_1124 0.36 -3.6 1,139,041 - EX28DRAFT_1124 0.36 -3.8 1,139,041 - EX28DRAFT_1124 0.36 -2.7 1,139,172 + EX28DRAFT_1124 0.46 -1.1 1,139,172 + EX28DRAFT_1124 0.46 -3.5 1,139,174 + EX28DRAFT_1124 0.46 -4.7 1,139,174 + EX28DRAFT_1124 0.46 -2.7 1,139,175 - EX28DRAFT_1124 0.46 -2.8 1,139,175 - EX28DRAFT_1124 0.46 -1.8 1,139,175 - EX28DRAFT_1124 0.46 -2.8 1,139,175 - EX28DRAFT_1124 0.46 -3.4 1,139,262 + EX28DRAFT_1124 0.52 -5.4 1,139,503 + EX28DRAFT_1124 0.69 -1.5 1,139,504 - EX28DRAFT_1124 0.69 -3.3 1,139,504 - EX28DRAFT_1124 0.69 -5.2 1,139,701 + EX28DRAFT_1124 0.83 -2.5 1,139,701 + EX28DRAFT_1124 0.83 -2.4 1,139,702 - EX28DRAFT_1124 0.83 -2.1 1,139,702 - EX28DRAFT_1124 0.83 -3.6 1,139,702 - EX28DRAFT_1124 0.83 -1.8 1,139,900 - -3.7 1,139,930 - -0.7 1,139,956 + +1.3 1,140,380 - EX28DRAFT_1125 0.41 +2.7 1,140,523 + EX28DRAFT_1125 0.55 +2.9 1,140,579 + EX28DRAFT_1125 0.60 +2.5 1,140,579 + EX28DRAFT_1125 0.60 +2.6 1,140,783 + EX28DRAFT_1125 0.80 +2.2 1,140,812 - EX28DRAFT_1125 0.83 +2.8 1,140,812 - EX28DRAFT_1125 0.83 +2.7 1,140,964 + +2.4 1,140,965 - +1.5 1,140,965 - +1.1 1,140,967 - +2.5 1,140,979 + +1.0 1,140,993 - -0.9 1,141,000 + +1.1 1,141,007 - -0.6 1,141,236 - EX28DRAFT_1126 0.11 -0.0 1,141,635 - EX28DRAFT_1126 0.36 +0.7 1,141,794 - EX28DRAFT_1126 0.47 +0.3 1,141,812 - EX28DRAFT_1126 0.48 -1.0 1,141,812 - EX28DRAFT_1126 0.48 -0.2
Or see this region's nucleotide sequence