Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0730 and EX28DRAFT_0731 are separated by 161 nucleotides EX28DRAFT_0731 and EX28DRAFT_0732 are separated by 74 nucleotides EX28DRAFT_0732 and EX28DRAFT_0733 are separated by 23 nucleotides EX28DRAFT_0733 and EX28DRAFT_0734 are separated by 506 nucleotides EX28DRAFT_0734 and EX28DRAFT_0735 overlap by 286 nucleotides
EX28DRAFT_0730: EX28DRAFT_0730 - YobH-like protein, at 729,760 to 729,999
_0730
EX28DRAFT_0731: EX28DRAFT_0731 - MgrB protein, at 730,161 to 730,304
_0731
EX28DRAFT_0732: EX28DRAFT_0732 - YebO-like protein, at 730,379 to 730,669
_0732
EX28DRAFT_0733: EX28DRAFT_0733 - Predicted Zn-dependent hydrolases of the beta-lactamase fold, at 730,693 to 731,682
_0733
EX28DRAFT_0734: EX28DRAFT_0734 - RNA, at 732,189 to 732,651
_0734
EX28DRAFT_0735: EX28DRAFT_0735 - Cold shock proteins, at 732,366 to 732,575
_0735
Position (kb) 730
731
732 Strain fitness (log2 ratio) -2
-1
0
1
2 at 729.704 kb on + strand at 729.872 kb on - strand, within EX28DRAFT_0730 at 729.875 kb on + strand, within EX28DRAFT_0730 at 729.975 kb on + strand, within EX28DRAFT_0730 at 730.022 kb on + strand at 730.034 kb on - strand at 730.034 kb on - strand at 730.100 kb on - strand at 730.133 kb on + strand at 730.305 kb on + strand at 730.305 kb on + strand at 730.625 kb on - strand, within EX28DRAFT_0732 at 730.625 kb on - strand, within EX28DRAFT_0732 at 730.960 kb on - strand, within EX28DRAFT_0733 at 730.968 kb on + strand, within EX28DRAFT_0733 at 731.238 kb on + strand, within EX28DRAFT_0733 at 731.238 kb on + strand, within EX28DRAFT_0733 at 731.267 kb on + strand, within EX28DRAFT_0733 at 731.381 kb on - strand, within EX28DRAFT_0733 at 731.422 kb on - strand, within EX28DRAFT_0733 at 731.444 kb on + strand, within EX28DRAFT_0733 at 731.453 kb on - strand, within EX28DRAFT_0733 at 731.484 kb on + strand, within EX28DRAFT_0733 at 731.668 kb on + strand at 731.697 kb on + strand at 731.704 kb on + strand at 731.706 kb on + strand at 731.706 kb on + strand at 731.992 kb on - strand at 732.078 kb on + strand at 732.079 kb on - strand at 732.161 kb on + strand at 732.161 kb on + strand at 732.208 kb on - strand at 732.280 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.282 kb on + strand, within EX28DRAFT_0734 at 732.286 kb on - strand, within EX28DRAFT_0734 at 732.300 kb on + strand, within EX28DRAFT_0734 at 732.377 kb on + strand at 732.389 kb on + strand at 732.457 kb on + strand at 732.569 kb on + strand at 732.602 kb on - strand at 732.621 kb on + strand at 732.659 kb on - strand at 732.670 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 729,704 + -0.4 729,872 - EX28DRAFT_0730 0.47 +1.2 729,875 + EX28DRAFT_0730 0.48 -1.5 729,975 + EX28DRAFT_0730 0.90 -0.4 730,022 + -0.8 730,034 - +0.4 730,034 - +2.5 730,100 - -0.7 730,133 + +0.1 730,305 + +0.4 730,305 + +1.5 730,625 - EX28DRAFT_0732 0.85 +0.3 730,625 - EX28DRAFT_0732 0.85 -0.2 730,960 - EX28DRAFT_0733 0.27 -0.1 730,968 + EX28DRAFT_0733 0.28 +0.4 731,238 + EX28DRAFT_0733 0.55 -0.3 731,238 + EX28DRAFT_0733 0.55 +0.0 731,267 + EX28DRAFT_0733 0.58 -0.7 731,381 - EX28DRAFT_0733 0.69 +0.1 731,422 - EX28DRAFT_0733 0.74 +0.2 731,444 + EX28DRAFT_0733 0.76 -0.1 731,453 - EX28DRAFT_0733 0.77 +2.0 731,484 + EX28DRAFT_0733 0.80 +0.9 731,668 + -0.1 731,697 + -0.5 731,704 + -0.4 731,706 + -1.3 731,706 + -0.7 731,992 - -0.9 732,078 + +0.2 732,079 - -1.4 732,161 + -0.4 732,161 + +0.6 732,208 - -2.6 732,280 + EX28DRAFT_0734 0.20 -0.0 732,282 + EX28DRAFT_0734 0.20 -0.0 732,282 + EX28DRAFT_0734 0.20 +0.3 732,282 + EX28DRAFT_0734 0.20 -0.8 732,282 + EX28DRAFT_0734 0.20 -0.4 732,282 + EX28DRAFT_0734 0.20 +0.2 732,286 - EX28DRAFT_0734 0.21 -0.1 732,300 + EX28DRAFT_0734 0.24 +0.1 732,377 + +0.3 732,389 + -0.6 732,457 + +0.1 732,569 + +0.2 732,602 - -0.6 732,621 + -2.3 732,659 - +0.8 732,670 + -0.4
Or see this region's nucleotide sequence