Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0714 and EX28DRAFT_0715 are separated by 16 nucleotides EX28DRAFT_0715 and EX28DRAFT_0716 are separated by 101 nucleotides EX28DRAFT_0716 and EX28DRAFT_0717 are separated by 193 nucleotides EX28DRAFT_0717 and EX28DRAFT_0718 are separated by 173 nucleotides
EX28DRAFT_0714: EX28DRAFT_0714 - Putative copper export protein, at 712,468 to 713,337
_0714
EX28DRAFT_0715: EX28DRAFT_0715 - Protein of unknown function (DUF2511), at 713,354 to 713,692
_0715
EX28DRAFT_0716: EX28DRAFT_0716 - RNA, at 713,794 to 713,938
_0716
EX28DRAFT_0717: EX28DRAFT_0717 - Glycosyltransferase family 17, at 714,132 to 715,028
_0717
EX28DRAFT_0718: EX28DRAFT_0718 - Uncharacterized protein conserved in bacteria, at 715,202 to 716,143
_0718
Position (kb) 714
715
716 Strain fitness (log2 ratio) -2
-1
0
1
2 at 713.181 kb on - strand, within EX28DRAFT_0714 at 713.344 kb on + strand at 713.345 kb on - strand at 713.348 kb on + strand at 713.348 kb on + strand at 713.348 kb on + strand at 713.348 kb on + strand at 713.349 kb on - strand at 713.349 kb on - strand at 713.368 kb on - strand at 713.379 kb on + strand at 713.513 kb on + strand, within EX28DRAFT_0715 at 713.611 kb on + strand, within EX28DRAFT_0715 at 713.611 kb on + strand, within EX28DRAFT_0715 at 713.753 kb on + strand at 713.753 kb on + strand at 713.754 kb on - strand at 713.821 kb on - strand, within EX28DRAFT_0716 at 713.843 kb on + strand, within EX28DRAFT_0716 at 713.941 kb on - strand at 713.974 kb on - strand at 714.025 kb on + strand at 714.025 kb on + strand at 714.025 kb on + strand at 714.026 kb on - strand at 714.129 kb on - strand at 714.129 kb on - strand at 714.129 kb on - strand at 714.129 kb on - strand at 714.133 kb on + strand at 714.133 kb on + strand at 714.176 kb on - strand at 714.176 kb on - strand at 714.313 kb on - strand, within EX28DRAFT_0717 at 714.555 kb on - strand, within EX28DRAFT_0717 at 714.555 kb on - strand, within EX28DRAFT_0717 at 714.847 kb on + strand, within EX28DRAFT_0717 at 714.848 kb on - strand, within EX28DRAFT_0717 at 714.848 kb on - strand, within EX28DRAFT_0717 at 714.852 kb on - strand, within EX28DRAFT_0717 at 714.875 kb on - strand, within EX28DRAFT_0717 at 714.882 kb on - strand, within EX28DRAFT_0717 at 714.992 kb on + strand at 714.992 kb on + strand at 714.992 kb on + strand at 715.007 kb on - strand at 715.008 kb on + strand at 715.009 kb on - strand at 715.009 kb on - strand at 715.009 kb on - strand at 715.022 kb on - strand at 715.022 kb on - strand at 715.129 kb on + strand at 715.216 kb on + strand at 715.230 kb on - strand at 715.377 kb on + strand, within EX28DRAFT_0718 at 715.737 kb on + strand, within EX28DRAFT_0718 at 715.743 kb on - strand, within EX28DRAFT_0718 at 715.921 kb on + strand, within EX28DRAFT_0718 at 716.013 kb on - strand, within EX28DRAFT_0718
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 713,181 - EX28DRAFT_0714 0.82 +2.2 713,344 + +0.6 713,345 - -0.2 713,348 + -1.5 713,348 + -1.0 713,348 + +0.4 713,348 + +1.3 713,349 - -0.5 713,349 - +0.8 713,368 - -0.2 713,379 + -0.2 713,513 + EX28DRAFT_0715 0.47 -0.3 713,611 + EX28DRAFT_0715 0.76 -1.5 713,611 + EX28DRAFT_0715 0.76 +0.2 713,753 + +0.7 713,753 + +0.5 713,754 - -0.6 713,821 - EX28DRAFT_0716 0.19 -0.2 713,843 + EX28DRAFT_0716 0.34 +0.2 713,941 - -0.3 713,974 - -0.4 714,025 + -2.2 714,025 + +0.1 714,025 + -0.5 714,026 - -1.1 714,129 - -0.6 714,129 - +0.2 714,129 - -0.2 714,129 - +0.2 714,133 + +0.2 714,133 + +0.6 714,176 - -0.4 714,176 - +0.3 714,313 - EX28DRAFT_0717 0.20 -0.4 714,555 - EX28DRAFT_0717 0.47 +0.0 714,555 - EX28DRAFT_0717 0.47 -0.2 714,847 + EX28DRAFT_0717 0.80 -0.8 714,848 - EX28DRAFT_0717 0.80 -0.8 714,848 - EX28DRAFT_0717 0.80 +0.5 714,852 - EX28DRAFT_0717 0.80 -1.2 714,875 - EX28DRAFT_0717 0.83 +0.6 714,882 - EX28DRAFT_0717 0.84 +0.2 714,992 + +0.7 714,992 + -0.9 714,992 + -0.4 715,007 - -1.6 715,008 + -1.2 715,009 - -0.1 715,009 - +0.2 715,009 - -0.4 715,022 - -2.7 715,022 - -1.0 715,129 + +0.0 715,216 + +0.7 715,230 - +0.1 715,377 + EX28DRAFT_0718 0.19 -0.9 715,737 + EX28DRAFT_0718 0.57 +0.4 715,743 - EX28DRAFT_0718 0.57 +1.0 715,921 + EX28DRAFT_0718 0.76 +0.0 716,013 - EX28DRAFT_0718 0.86 +0.1
Or see this region's nucleotide sequence