Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0699 and EX28DRAFT_0700 are separated by 15 nucleotides EX28DRAFT_0700 and EX28DRAFT_0701 are separated by 121 nucleotides
EX28DRAFT_0699: EX28DRAFT_0699 - ABC-type Zn2+ transport system, periplasmic component/surface adhesin, at 695,656 to 696,615
_0699
EX28DRAFT_0700: EX28DRAFT_0700 - Membrane proteins related to metalloendopeptidases, at 696,631 to 697,950
_0700
EX28DRAFT_0701: EX28DRAFT_0701 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase, at 698,072 to 699,043
_0701
Position (kb) 696
697
698 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 695.675 kb on + strand at 695.724 kb on + strand at 695.900 kb on + strand, within EX28DRAFT_0699 at 695.900 kb on + strand, within EX28DRAFT_0699 at 696.101 kb on - strand, within EX28DRAFT_0699 at 696.101 kb on - strand, within EX28DRAFT_0699 at 696.131 kb on + strand, within EX28DRAFT_0699 at 696.200 kb on + strand, within EX28DRAFT_0699 at 696.233 kb on + strand, within EX28DRAFT_0699 at 696.283 kb on - strand, within EX28DRAFT_0699 at 696.557 kb on - strand at 696.628 kb on + strand at 696.629 kb on - strand at 696.666 kb on + strand at 696.746 kb on - strand at 696.752 kb on - strand at 696.922 kb on + strand, within EX28DRAFT_0700 at 696.922 kb on + strand, within EX28DRAFT_0700 at 696.922 kb on + strand, within EX28DRAFT_0700 at 696.923 kb on - strand, within EX28DRAFT_0700 at 696.985 kb on - strand, within EX28DRAFT_0700 at 697.666 kb on + strand, within EX28DRAFT_0700 at 697.677 kb on - strand, within EX28DRAFT_0700 at 697.690 kb on - strand, within EX28DRAFT_0700 at 697.690 kb on - strand, within EX28DRAFT_0700 at 697.693 kb on + strand, within EX28DRAFT_0700 at 697.694 kb on - strand, within EX28DRAFT_0700 at 697.695 kb on + strand, within EX28DRAFT_0700 at 697.696 kb on - strand, within EX28DRAFT_0700 at 697.705 kb on + strand, within EX28DRAFT_0700 at 697.708 kb on - strand, within EX28DRAFT_0700 at 697.719 kb on + strand, within EX28DRAFT_0700 at 697.720 kb on - strand, within EX28DRAFT_0700 at 697.720 kb on - strand, within EX28DRAFT_0700 at 697.813 kb on + strand, within EX28DRAFT_0700 at 697.814 kb on - strand, within EX28DRAFT_0700 at 697.887 kb on + strand at 697.948 kb on + strand at 697.948 kb on + strand at 698.031 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 695,675 + +1.3 695,724 + -0.4 695,900 + EX28DRAFT_0699 0.25 +0.2 695,900 + EX28DRAFT_0699 0.25 -0.8 696,101 - EX28DRAFT_0699 0.46 -0.7 696,101 - EX28DRAFT_0699 0.46 -1.3 696,131 + EX28DRAFT_0699 0.49 -0.5 696,200 + EX28DRAFT_0699 0.57 -0.2 696,233 + EX28DRAFT_0699 0.60 +0.1 696,283 - EX28DRAFT_0699 0.65 -0.8 696,557 - +1.0 696,628 + +0.2 696,629 - -0.0 696,666 + -0.5 696,746 - -0.4 696,752 - -1.4 696,922 + EX28DRAFT_0700 0.22 +0.8 696,922 + EX28DRAFT_0700 0.22 +0.1 696,922 + EX28DRAFT_0700 0.22 +0.1 696,923 - EX28DRAFT_0700 0.22 -0.3 696,985 - EX28DRAFT_0700 0.27 +0.1 697,666 + EX28DRAFT_0700 0.78 +1.1 697,677 - EX28DRAFT_0700 0.79 +0.7 697,690 - EX28DRAFT_0700 0.80 -0.2 697,690 - EX28DRAFT_0700 0.80 +0.6 697,693 + EX28DRAFT_0700 0.80 +0.0 697,694 - EX28DRAFT_0700 0.81 +0.8 697,695 + EX28DRAFT_0700 0.81 -0.0 697,696 - EX28DRAFT_0700 0.81 -3.5 697,705 + EX28DRAFT_0700 0.81 -0.3 697,708 - EX28DRAFT_0700 0.82 +0.2 697,719 + EX28DRAFT_0700 0.82 +0.1 697,720 - EX28DRAFT_0700 0.82 +0.3 697,720 - EX28DRAFT_0700 0.82 +0.1 697,813 + EX28DRAFT_0700 0.90 +0.6 697,814 - EX28DRAFT_0700 0.90 +0.4 697,887 + +0.3 697,948 + +0.4 697,948 + +0.5 698,031 + +0.4
Or see this region's nucleotide sequence