Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0631 and EX28DRAFT_0632 are separated by 66 nucleotides EX28DRAFT_0632 and EX28DRAFT_0633 are separated by 466 nucleotides
EX28DRAFT_0631: EX28DRAFT_0631 - DNA-binding HTH domain-containing proteins, at 627,924 to 628,646
_0631
EX28DRAFT_0632: EX28DRAFT_0632 - Protein of unknown function (DUF2594), at 628,713 to 628,937
_0632
EX28DRAFT_0633: EX28DRAFT_0633 - two component transcriptional regulator, LuxR family, at 629,404 to 630,060
_0633
Position (kb) 628
629 Strain fitness (log2 ratio) -2
-1
0
1
2 at 627.732 kb on + strand at 627.806 kb on - strand at 627.815 kb on - strand at 627.869 kb on + strand at 627.870 kb on - strand at 627.870 kb on - strand at 627.870 kb on - strand at 627.870 kb on - strand at 627.875 kb on - strand at 627.876 kb on + strand at 627.885 kb on + strand at 627.886 kb on - strand at 627.888 kb on + strand at 627.889 kb on - strand at 627.896 kb on - strand at 627.896 kb on - strand at 627.896 kb on - strand at 627.917 kb on - strand at 627.919 kb on + strand at 627.920 kb on - strand at 627.920 kb on - strand at 627.920 kb on - strand at 627.920 kb on - strand at 627.923 kb on + strand at 627.924 kb on - strand at 627.924 kb on - strand at 627.924 kb on - strand at 628.000 kb on + strand, within EX28DRAFT_0631 at 628.000 kb on + strand, within EX28DRAFT_0631 at 628.000 kb on + strand, within EX28DRAFT_0631 at 628.000 kb on + strand, within EX28DRAFT_0631 at 628.001 kb on - strand, within EX28DRAFT_0631 at 628.013 kb on - strand, within EX28DRAFT_0631 at 628.013 kb on - strand, within EX28DRAFT_0631 at 628.079 kb on + strand, within EX28DRAFT_0631 at 628.088 kb on + strand, within EX28DRAFT_0631 at 628.110 kb on + strand, within EX28DRAFT_0631 at 628.110 kb on + strand, within EX28DRAFT_0631 at 628.134 kb on + strand, within EX28DRAFT_0631 at 628.240 kb on + strand, within EX28DRAFT_0631 at 628.241 kb on - strand, within EX28DRAFT_0631 at 628.241 kb on - strand, within EX28DRAFT_0631 at 628.241 kb on - strand, within EX28DRAFT_0631 at 628.248 kb on - strand, within EX28DRAFT_0631 at 628.268 kb on - strand, within EX28DRAFT_0631 at 628.302 kb on - strand, within EX28DRAFT_0631 at 628.334 kb on + strand, within EX28DRAFT_0631 at 628.337 kb on + strand, within EX28DRAFT_0631 at 628.337 kb on + strand, within EX28DRAFT_0631 at 628.342 kb on + strand, within EX28DRAFT_0631 at 628.342 kb on + strand, within EX28DRAFT_0631 at 628.342 kb on + strand, within EX28DRAFT_0631 at 628.343 kb on - strand, within EX28DRAFT_0631 at 628.442 kb on + strand, within EX28DRAFT_0631 at 628.442 kb on + strand, within EX28DRAFT_0631 at 628.550 kb on + strand, within EX28DRAFT_0631 at 628.656 kb on - strand at 628.808 kb on + strand, within EX28DRAFT_0632 at 628.881 kb on + strand, within EX28DRAFT_0632 at 628.882 kb on - strand, within EX28DRAFT_0632 at 628.882 kb on - strand, within EX28DRAFT_0632 at 628.997 kb on + strand at 628.998 kb on - strand at 629.046 kb on - strand at 629.328 kb on - strand at 629.328 kb on - strand at 629.328 kb on - strand at 629.328 kb on - strand at 629.328 kb on - strand at 629.351 kb on + strand at 629.351 kb on + strand at 629.351 kb on + strand at 629.351 kb on + strand at 629.351 kb on + strand at 629.352 kb on - strand at 629.352 kb on - strand at 629.352 kb on - strand at 629.352 kb on - strand at 629.352 kb on - strand at 629.353 kb on + strand at 629.354 kb on - strand at 629.363 kb on + strand at 629.363 kb on + strand at 629.386 kb on - strand at 629.386 kb on - strand at 629.453 kb on + strand at 629.453 kb on + strand at 629.453 kb on + strand at 629.453 kb on + strand at 629.454 kb on - strand at 629.472 kb on + strand, within EX28DRAFT_0633 at 629.472 kb on + strand, within EX28DRAFT_0633 at 629.472 kb on + strand, within EX28DRAFT_0633 at 629.472 kb on + strand, within EX28DRAFT_0633 at 629.472 kb on + strand, within EX28DRAFT_0633 at 629.473 kb on - strand, within EX28DRAFT_0633 at 629.473 kb on - strand, within EX28DRAFT_0633 at 629.473 kb on - strand, within EX28DRAFT_0633 at 629.475 kb on + strand, within EX28DRAFT_0633 at 629.475 kb on + strand, within EX28DRAFT_0633 at 629.475 kb on + strand, within EX28DRAFT_0633 at 629.475 kb on + strand, within EX28DRAFT_0633 at 629.476 kb on - strand, within EX28DRAFT_0633 at 629.476 kb on - strand, within EX28DRAFT_0633 at 629.476 kb on - strand, within EX28DRAFT_0633 at 629.476 kb on - strand, within EX28DRAFT_0633 at 629.481 kb on + strand, within EX28DRAFT_0633 at 629.481 kb on + strand, within EX28DRAFT_0633 at 629.481 kb on + strand, within EX28DRAFT_0633 at 629.482 kb on - strand, within EX28DRAFT_0633 at 629.482 kb on - strand, within EX28DRAFT_0633 at 629.482 kb on - strand, within EX28DRAFT_0633 at 629.484 kb on + strand, within EX28DRAFT_0633 at 629.484 kb on + strand, within EX28DRAFT_0633 at 629.485 kb on - strand, within EX28DRAFT_0633 at 629.523 kb on - strand, within EX28DRAFT_0633 at 629.556 kb on - strand, within EX28DRAFT_0633 at 629.565 kb on + strand, within EX28DRAFT_0633 at 629.565 kb on + strand, within EX28DRAFT_0633 at 629.565 kb on + strand, within EX28DRAFT_0633 at 629.565 kb on + strand, within EX28DRAFT_0633 at 629.566 kb on - strand, within EX28DRAFT_0633 at 629.566 kb on - strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.571 kb on + strand, within EX28DRAFT_0633 at 629.572 kb on - strand, within EX28DRAFT_0633 at 629.572 kb on - strand, within EX28DRAFT_0633 at 629.572 kb on - strand, within EX28DRAFT_0633 at 629.572 kb on - strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.616 kb on + strand, within EX28DRAFT_0633 at 629.617 kb on - strand, within EX28DRAFT_0633 at 629.617 kb on - strand, within EX28DRAFT_0633 at 629.617 kb on - strand, within EX28DRAFT_0633 at 629.617 kb on - strand, within EX28DRAFT_0633 at 629.617 kb on - strand, within EX28DRAFT_0633 at 629.628 kb on + strand, within EX28DRAFT_0633 at 629.628 kb on + strand, within EX28DRAFT_0633 at 629.628 kb on + strand, within EX28DRAFT_0633 at 629.629 kb on - strand, within EX28DRAFT_0633 at 629.629 kb on - strand, within EX28DRAFT_0633 at 629.705 kb on - strand, within EX28DRAFT_0633 at 629.712 kb on + strand, within EX28DRAFT_0633 at 629.712 kb on + strand, within EX28DRAFT_0633 at 629.712 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.773 kb on + strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.774 kb on - strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.777 kb on + strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.778 kb on - strand, within EX28DRAFT_0633 at 629.874 kb on + strand, within EX28DRAFT_0633 at 629.874 kb on + strand, within EX28DRAFT_0633 at 629.874 kb on + strand, within EX28DRAFT_0633 at 629.875 kb on - strand, within EX28DRAFT_0633 at 629.875 kb on - strand, within EX28DRAFT_0633 at 629.875 kb on - strand, within EX28DRAFT_0633 at 629.875 kb on - strand, within EX28DRAFT_0633 at 629.875 kb on - strand, within EX28DRAFT_0633 at 629.875 kb on - strand, within EX28DRAFT_0633
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 627,732 + -0.7 627,806 - +0.8 627,815 - -1.8 627,869 + +0.5 627,870 - +0.5 627,870 - +1.7 627,870 - +1.4 627,870 - +0.9 627,875 - +2.1 627,876 + +0.3 627,885 + -0.7 627,886 - +0.4 627,888 + -0.9 627,889 - +1.2 627,896 - +0.5 627,896 - +0.6 627,896 - +1.7 627,917 - +1.0 627,919 + -1.0 627,920 - +0.7 627,920 - +1.5 627,920 - +0.7 627,920 - +1.0 627,923 + +1.2 627,924 - +1.0 627,924 - +1.0 627,924 - +0.3 628,000 + EX28DRAFT_0631 0.11 +0.9 628,000 + EX28DRAFT_0631 0.11 +1.1 628,000 + EX28DRAFT_0631 0.11 +1.0 628,000 + EX28DRAFT_0631 0.11 +1.0 628,001 - EX28DRAFT_0631 0.11 -0.6 628,013 - EX28DRAFT_0631 0.12 +1.4 628,013 - EX28DRAFT_0631 0.12 +0.9 628,079 + EX28DRAFT_0631 0.21 +0.5 628,088 + EX28DRAFT_0631 0.23 +1.0 628,110 + EX28DRAFT_0631 0.26 +1.5 628,110 + EX28DRAFT_0631 0.26 +1.2 628,134 + EX28DRAFT_0631 0.29 +0.4 628,240 + EX28DRAFT_0631 0.44 +1.5 628,241 - EX28DRAFT_0631 0.44 +0.1 628,241 - EX28DRAFT_0631 0.44 +0.3 628,241 - EX28DRAFT_0631 0.44 +0.5 628,248 - EX28DRAFT_0631 0.45 +1.2 628,268 - EX28DRAFT_0631 0.48 +0.3 628,302 - EX28DRAFT_0631 0.52 +0.3 628,334 + EX28DRAFT_0631 0.57 +0.6 628,337 + EX28DRAFT_0631 0.57 +0.9 628,337 + EX28DRAFT_0631 0.57 +1.6 628,342 + EX28DRAFT_0631 0.58 +1.5 628,342 + EX28DRAFT_0631 0.58 +1.2 628,342 + EX28DRAFT_0631 0.58 +1.2 628,343 - EX28DRAFT_0631 0.58 -0.9 628,442 + EX28DRAFT_0631 0.72 -0.3 628,442 + EX28DRAFT_0631 0.72 +0.7 628,550 + EX28DRAFT_0631 0.87 +0.9 628,656 - -1.7 628,808 + EX28DRAFT_0632 0.42 -1.6 628,881 + EX28DRAFT_0632 0.75 -1.8 628,882 - EX28DRAFT_0632 0.75 -0.5 628,882 - EX28DRAFT_0632 0.75 -1.1 628,997 + -2.0 628,998 - -0.1 629,046 - -0.6 629,328 - +0.9 629,328 - +1.9 629,328 - +0.6 629,328 - +2.7 629,328 - +1.5 629,351 + -0.1 629,351 + +0.1 629,351 + +0.5 629,351 + -0.2 629,351 + -1.8 629,352 - +1.6 629,352 - +0.8 629,352 - +1.0 629,352 - +0.3 629,352 - +1.0 629,353 + +1.1 629,354 - +0.3 629,363 + +0.3 629,363 + +0.9 629,386 - +0.2 629,386 - +1.1 629,453 + +0.7 629,453 + +0.4 629,453 + +2.2 629,453 + +1.2 629,454 - +0.6 629,472 + EX28DRAFT_0633 0.10 +0.8 629,472 + EX28DRAFT_0633 0.10 +1.4 629,472 + EX28DRAFT_0633 0.10 +0.9 629,472 + EX28DRAFT_0633 0.10 +1.8 629,472 + EX28DRAFT_0633 0.10 +0.8 629,473 - EX28DRAFT_0633 0.11 +0.6 629,473 - EX28DRAFT_0633 0.11 +1.4 629,473 - EX28DRAFT_0633 0.11 +1.1 629,475 + EX28DRAFT_0633 0.11 +1.2 629,475 + EX28DRAFT_0633 0.11 +0.7 629,475 + EX28DRAFT_0633 0.11 +1.7 629,475 + EX28DRAFT_0633 0.11 +0.7 629,476 - EX28DRAFT_0633 0.11 +1.6 629,476 - EX28DRAFT_0633 0.11 +0.1 629,476 - EX28DRAFT_0633 0.11 +1.7 629,476 - EX28DRAFT_0633 0.11 +1.3 629,481 + EX28DRAFT_0633 0.12 +1.5 629,481 + EX28DRAFT_0633 0.12 +0.9 629,481 + EX28DRAFT_0633 0.12 +1.0 629,482 - EX28DRAFT_0633 0.12 +0.9 629,482 - EX28DRAFT_0633 0.12 +1.3 629,482 - EX28DRAFT_0633 0.12 -1.1 629,484 + EX28DRAFT_0633 0.12 +1.3 629,484 + EX28DRAFT_0633 0.12 +1.4 629,485 - EX28DRAFT_0633 0.12 +2.1 629,523 - EX28DRAFT_0633 0.18 +1.1 629,556 - EX28DRAFT_0633 0.23 +0.5 629,565 + EX28DRAFT_0633 0.25 +1.4 629,565 + EX28DRAFT_0633 0.25 +1.2 629,565 + EX28DRAFT_0633 0.25 +0.9 629,565 + EX28DRAFT_0633 0.25 +1.8 629,566 - EX28DRAFT_0633 0.25 +0.6 629,566 - EX28DRAFT_0633 0.25 +1.7 629,571 + EX28DRAFT_0633 0.25 +0.6 629,571 + EX28DRAFT_0633 0.25 +1.0 629,571 + EX28DRAFT_0633 0.25 +1.1 629,571 + EX28DRAFT_0633 0.25 +1.1 629,571 + EX28DRAFT_0633 0.25 +1.0 629,571 + EX28DRAFT_0633 0.25 +0.9 629,571 + EX28DRAFT_0633 0.25 +0.6 629,571 + EX28DRAFT_0633 0.25 +1.0 629,571 + EX28DRAFT_0633 0.25 +1.0 629,572 - EX28DRAFT_0633 0.26 +0.5 629,572 - EX28DRAFT_0633 0.26 +0.4 629,572 - EX28DRAFT_0633 0.26 +0.2 629,572 - EX28DRAFT_0633 0.26 +0.8 629,616 + EX28DRAFT_0633 0.32 +1.1 629,616 + EX28DRAFT_0633 0.32 +0.6 629,616 + EX28DRAFT_0633 0.32 +1.0 629,616 + EX28DRAFT_0633 0.32 +0.7 629,616 + EX28DRAFT_0633 0.32 +0.7 629,616 + EX28DRAFT_0633 0.32 +1.3 629,616 + EX28DRAFT_0633 0.32 +1.0 629,616 + EX28DRAFT_0633 0.32 -0.1 629,617 - EX28DRAFT_0633 0.32 +0.3 629,617 - EX28DRAFT_0633 0.32 +0.4 629,617 - EX28DRAFT_0633 0.32 +1.6 629,617 - EX28DRAFT_0633 0.32 +1.1 629,617 - EX28DRAFT_0633 0.32 +1.2 629,628 + EX28DRAFT_0633 0.34 +0.5 629,628 + EX28DRAFT_0633 0.34 +1.3 629,628 + EX28DRAFT_0633 0.34 +1.0 629,629 - EX28DRAFT_0633 0.34 +1.7 629,629 - EX28DRAFT_0633 0.34 +0.4 629,705 - EX28DRAFT_0633 0.46 +1.1 629,712 + EX28DRAFT_0633 0.47 +0.9 629,712 + EX28DRAFT_0633 0.47 +0.3 629,712 + EX28DRAFT_0633 0.47 +1.0 629,773 + EX28DRAFT_0633 0.56 +1.2 629,773 + EX28DRAFT_0633 0.56 +0.9 629,773 + EX28DRAFT_0633 0.56 -0.2 629,773 + EX28DRAFT_0633 0.56 +0.8 629,773 + EX28DRAFT_0633 0.56 +0.1 629,773 + EX28DRAFT_0633 0.56 +0.7 629,773 + EX28DRAFT_0633 0.56 +1.0 629,773 + EX28DRAFT_0633 0.56 +1.2 629,773 + EX28DRAFT_0633 0.56 +1.3 629,773 + EX28DRAFT_0633 0.56 +0.5 629,773 + EX28DRAFT_0633 0.56 +0.6 629,773 + EX28DRAFT_0633 0.56 +1.1 629,774 - EX28DRAFT_0633 0.56 +1.6 629,774 - EX28DRAFT_0633 0.56 +1.1 629,774 - EX28DRAFT_0633 0.56 +1.1 629,774 - EX28DRAFT_0633 0.56 +1.3 629,774 - EX28DRAFT_0633 0.56 +1.4 629,774 - EX28DRAFT_0633 0.56 +1.2 629,774 - EX28DRAFT_0633 0.56 +1.1 629,774 - EX28DRAFT_0633 0.56 +0.7 629,774 - EX28DRAFT_0633 0.56 +1.1 629,774 - EX28DRAFT_0633 0.56 +1.4 629,774 - EX28DRAFT_0633 0.56 +1.4 629,777 + EX28DRAFT_0633 0.57 +0.8 629,777 + EX28DRAFT_0633 0.57 +0.5 629,777 + EX28DRAFT_0633 0.57 +1.1 629,777 + EX28DRAFT_0633 0.57 +1.6 629,777 + EX28DRAFT_0633 0.57 +1.0 629,777 + EX28DRAFT_0633 0.57 +1.3 629,777 + EX28DRAFT_0633 0.57 +0.9 629,777 + EX28DRAFT_0633 0.57 +0.8 629,777 + EX28DRAFT_0633 0.57 +0.8 629,777 + EX28DRAFT_0633 0.57 +2.3 629,777 + EX28DRAFT_0633 0.57 +0.6 629,778 - EX28DRAFT_0633 0.57 +1.3 629,778 - EX28DRAFT_0633 0.57 +0.4 629,778 - EX28DRAFT_0633 0.57 +0.9 629,778 - EX28DRAFT_0633 0.57 +2.0 629,778 - EX28DRAFT_0633 0.57 +0.7 629,778 - EX28DRAFT_0633 0.57 +1.6 629,778 - EX28DRAFT_0633 0.57 +0.3 629,778 - EX28DRAFT_0633 0.57 +0.9 629,778 - EX28DRAFT_0633 0.57 +1.6 629,778 - EX28DRAFT_0633 0.57 +1.2 629,778 - EX28DRAFT_0633 0.57 +1.3 629,874 + EX28DRAFT_0633 0.72 +1.0 629,874 + EX28DRAFT_0633 0.72 +0.5 629,874 + EX28DRAFT_0633 0.72 +0.8 629,875 - EX28DRAFT_0633 0.72 +0.7 629,875 - EX28DRAFT_0633 0.72 +0.9 629,875 - EX28DRAFT_0633 0.72 +0.9 629,875 - EX28DRAFT_0633 0.72 +0.6 629,875 - EX28DRAFT_0633 0.72 +1.8 629,875 - EX28DRAFT_0633 0.72 +0.9
Or see this region's nucleotide sequence