Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0622 and EX28DRAFT_0623 are separated by 400 nucleotides EX28DRAFT_0623 and EX28DRAFT_0624 are separated by 62 nucleotides
EX28DRAFT_0622: EX28DRAFT_0622 - Flagellar capping protein, at 618,911 to 620,335
_0622
EX28DRAFT_0623: EX28DRAFT_0623 - Bacterial flagellin N-terminal helical region/Bacterial flagellin C-terminal helical region, at 620,736 to 621,560
_0623
EX28DRAFT_0624: EX28DRAFT_0624 - hypothetical protein, at 621,623 to 622,828
_0624
Position (kb) 620
621
622 Strain fitness (log2 ratio) -2
-1
0
1 at 619.955 kb on - strand, within EX28DRAFT_0622 at 619.964 kb on - strand, within EX28DRAFT_0622 at 619.964 kb on - strand, within EX28DRAFT_0622 at 619.973 kb on - strand, within EX28DRAFT_0622 at 620.092 kb on + strand, within EX28DRAFT_0622 at 620.208 kb on - strand at 620.221 kb on - strand at 620.283 kb on + strand at 620.284 kb on - strand at 620.284 kb on - strand at 620.284 kb on - strand at 620.285 kb on + strand at 620.286 kb on - strand at 620.429 kb on + strand at 620.449 kb on - strand at 620.469 kb on - strand at 620.546 kb on - strand at 620.750 kb on + strand at 620.750 kb on + strand at 620.754 kb on - strand at 620.810 kb on + strand at 621.162 kb on - strand, within EX28DRAFT_0623 at 621.193 kb on + strand, within EX28DRAFT_0623 at 621.597 kb on + strand at 621.854 kb on - strand, within EX28DRAFT_0624 at 621.893 kb on - strand, within EX28DRAFT_0624 at 621.893 kb on - strand, within EX28DRAFT_0624 at 621.893 kb on - strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.039 kb on + strand, within EX28DRAFT_0624 at 622.040 kb on - strand, within EX28DRAFT_0624 at 622.175 kb on + strand, within EX28DRAFT_0624 at 622.253 kb on + strand, within EX28DRAFT_0624 at 622.322 kb on + strand, within EX28DRAFT_0624 at 622.515 kb on - strand, within EX28DRAFT_0624 at 622.556 kb on + strand, within EX28DRAFT_0624 at 622.557 kb on - strand, within EX28DRAFT_0624
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 619,955 - EX28DRAFT_0622 0.73 -1.8 619,964 - EX28DRAFT_0622 0.74 -0.8 619,964 - EX28DRAFT_0622 0.74 -1.4 619,973 - EX28DRAFT_0622 0.75 -0.4 620,092 + EX28DRAFT_0622 0.83 -0.9 620,208 - -0.7 620,221 - -0.4 620,283 + +0.2 620,284 - +0.1 620,284 - -1.2 620,284 - -1.3 620,285 + -1.0 620,286 - +0.4 620,429 + -2.1 620,449 - -0.1 620,469 - -0.4 620,546 - +0.4 620,750 + +0.1 620,750 + -0.2 620,754 - +0.7 620,810 + -0.4 621,162 - EX28DRAFT_0623 0.52 -2.2 621,193 + EX28DRAFT_0623 0.55 -0.3 621,597 + -0.3 621,854 - EX28DRAFT_0624 0.19 -0.5 621,893 - EX28DRAFT_0624 0.22 -0.3 621,893 - EX28DRAFT_0624 0.22 -0.3 621,893 - EX28DRAFT_0624 0.22 -0.6 622,039 + EX28DRAFT_0624 0.34 -0.8 622,039 + EX28DRAFT_0624 0.34 +0.3 622,039 + EX28DRAFT_0624 0.34 -0.8 622,039 + EX28DRAFT_0624 0.34 -1.9 622,040 - EX28DRAFT_0624 0.35 -0.4 622,175 + EX28DRAFT_0624 0.46 -1.6 622,253 + EX28DRAFT_0624 0.52 -0.0 622,322 + EX28DRAFT_0624 0.58 +1.3 622,515 - EX28DRAFT_0624 0.74 -1.0 622,556 + EX28DRAFT_0624 0.77 -0.2 622,557 - EX28DRAFT_0624 0.77 +0.5
Or see this region's nucleotide sequence