Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0475 and EX28DRAFT_0476 are separated by 141 nucleotides EX28DRAFT_0476 and EX28DRAFT_0477 overlap by 6 nucleotides EX28DRAFT_0477 and EX28DRAFT_0478 are separated by 82 nucleotides
EX28DRAFT_0475: EX28DRAFT_0475 - lipid kinase YegS, at 458,572 to 459,471
_0475
EX28DRAFT_0476: EX28DRAFT_0476 - Uncharacterized conserved protein, at 459,613 to 460,113
_0476
EX28DRAFT_0477: EX28DRAFT_0477 - RNA, at 460,108 to 460,192
_0477
EX28DRAFT_0478: EX28DRAFT_0478 - Collagenase and related proteases, at 460,275 to 461,636
_0478
Position (kb) 459
460
461 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 458.682 kb on + strand, within EX28DRAFT_0475 at 458.731 kb on - strand, within EX28DRAFT_0475 at 458.731 kb on - strand, within EX28DRAFT_0475 at 458.761 kb on - strand, within EX28DRAFT_0475 at 458.761 kb on - strand, within EX28DRAFT_0475 at 458.761 kb on - strand, within EX28DRAFT_0475 at 458.981 kb on + strand, within EX28DRAFT_0475 at 458.982 kb on - strand, within EX28DRAFT_0475 at 459.066 kb on + strand, within EX28DRAFT_0475 at 459.067 kb on - strand, within EX28DRAFT_0475 at 459.067 kb on - strand, within EX28DRAFT_0475 at 459.067 kb on - strand, within EX28DRAFT_0475 at 459.079 kb on - strand, within EX28DRAFT_0475 at 459.079 kb on - strand, within EX28DRAFT_0475 at 459.324 kb on + strand, within EX28DRAFT_0475 at 459.327 kb on - strand, within EX28DRAFT_0475 at 459.327 kb on - strand, within EX28DRAFT_0475 at 459.499 kb on + strand at 459.507 kb on + strand at 459.508 kb on - strand at 459.508 kb on - strand at 459.509 kb on + strand at 459.556 kb on + strand at 459.557 kb on - strand at 459.573 kb on + strand at 459.597 kb on + strand at 459.598 kb on - strand at 459.664 kb on + strand, within EX28DRAFT_0476 at 459.768 kb on - strand, within EX28DRAFT_0476 at 459.789 kb on + strand, within EX28DRAFT_0476 at 459.790 kb on - strand, within EX28DRAFT_0476 at 459.813 kb on - strand, within EX28DRAFT_0476 at 459.813 kb on - strand, within EX28DRAFT_0476 at 459.930 kb on - strand, within EX28DRAFT_0476 at 459.930 kb on - strand, within EX28DRAFT_0476 at 459.930 kb on - strand, within EX28DRAFT_0476 at 459.967 kb on - strand, within EX28DRAFT_0476 at 459.970 kb on + strand, within EX28DRAFT_0476 at 459.971 kb on - strand, within EX28DRAFT_0476 at 460.112 kb on - strand at 460.131 kb on + strand, within EX28DRAFT_0477 at 460.141 kb on - strand, within EX28DRAFT_0477 at 460.164 kb on + strand, within EX28DRAFT_0477 at 460.201 kb on + strand at 460.272 kb on + strand at 460.277 kb on - strand at 460.588 kb on + strand, within EX28DRAFT_0478 at 460.611 kb on - strand, within EX28DRAFT_0478 at 460.751 kb on - strand, within EX28DRAFT_0478 at 460.885 kb on + strand, within EX28DRAFT_0478
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 458,682 + EX28DRAFT_0475 0.12 +1.2 458,731 - EX28DRAFT_0475 0.18 +0.9 458,731 - EX28DRAFT_0475 0.18 +0.1 458,761 - EX28DRAFT_0475 0.21 +0.6 458,761 - EX28DRAFT_0475 0.21 -0.2 458,761 - EX28DRAFT_0475 0.21 -0.8 458,981 + EX28DRAFT_0475 0.45 +0.3 458,982 - EX28DRAFT_0475 0.46 +0.2 459,066 + EX28DRAFT_0475 0.55 +0.3 459,067 - EX28DRAFT_0475 0.55 -0.9 459,067 - EX28DRAFT_0475 0.55 -0.2 459,067 - EX28DRAFT_0475 0.55 -0.3 459,079 - EX28DRAFT_0475 0.56 +0.4 459,079 - EX28DRAFT_0475 0.56 -0.2 459,324 + EX28DRAFT_0475 0.84 -0.4 459,327 - EX28DRAFT_0475 0.84 +0.6 459,327 - EX28DRAFT_0475 0.84 -0.3 459,499 + -0.0 459,507 + -0.4 459,508 - -0.1 459,508 - -0.6 459,509 + -0.1 459,556 + +1.2 459,557 - +0.1 459,573 + -0.4 459,597 + -0.5 459,598 - -3.3 459,664 + EX28DRAFT_0476 0.10 +0.4 459,768 - EX28DRAFT_0476 0.31 +0.0 459,789 + EX28DRAFT_0476 0.35 -1.1 459,790 - EX28DRAFT_0476 0.35 -2.9 459,813 - EX28DRAFT_0476 0.40 -0.0 459,813 - EX28DRAFT_0476 0.40 +0.0 459,930 - EX28DRAFT_0476 0.63 -0.7 459,930 - EX28DRAFT_0476 0.63 -2.9 459,930 - EX28DRAFT_0476 0.63 +0.2 459,967 - EX28DRAFT_0476 0.71 -0.2 459,970 + EX28DRAFT_0476 0.71 +0.7 459,971 - EX28DRAFT_0476 0.71 -0.1 460,112 - -2.2 460,131 + EX28DRAFT_0477 0.27 +0.3 460,141 - EX28DRAFT_0477 0.39 -0.8 460,164 + EX28DRAFT_0477 0.66 +1.5 460,201 + -0.6 460,272 + -0.0 460,277 - +0.4 460,588 + EX28DRAFT_0478 0.23 +0.5 460,611 - EX28DRAFT_0478 0.25 +1.3 460,751 - EX28DRAFT_0478 0.35 -1.2 460,885 + EX28DRAFT_0478 0.45 +0.1
Or see this region's nucleotide sequence