Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0381 and EX28DRAFT_0382 are separated by 1 nucleotides EX28DRAFT_0382 and EX28DRAFT_0383 overlap by 1 nucleotides
EX28DRAFT_0381: EX28DRAFT_0381 - ABC-type uncharacterized transport system, duplicated ATPase component, at 352,496 to 354,085
_0381
EX28DRAFT_0382: EX28DRAFT_0382 - ABC-type uncharacterized transport system, permease component, at 354,087 to 355,112
_0382
EX28DRAFT_0383: EX28DRAFT_0383 - ABC-type uncharacterized transport system, permease component, at 355,112 to 356,206
_0383
Position (kb) 354
355
356 Strain fitness (log2 ratio) -2
-1
0
1
2 at 353.329 kb on + strand, within EX28DRAFT_0381 at 353.330 kb on - strand, within EX28DRAFT_0381 at 353.450 kb on - strand, within EX28DRAFT_0381 at 353.501 kb on + strand, within EX28DRAFT_0381 at 353.658 kb on - strand, within EX28DRAFT_0381 at 353.658 kb on - strand, within EX28DRAFT_0381 at 354.065 kb on - strand at 354.089 kb on - strand at 354.412 kb on + strand, within EX28DRAFT_0382 at 354.611 kb on - strand, within EX28DRAFT_0382 at 354.611 kb on - strand, within EX28DRAFT_0382 at 354.797 kb on + strand, within EX28DRAFT_0382 at 354.798 kb on - strand, within EX28DRAFT_0382 at 354.798 kb on - strand, within EX28DRAFT_0382 at 355.150 kb on + strand at 355.152 kb on + strand at 355.153 kb on - strand at 355.201 kb on + strand at 355.203 kb on + strand at 355.204 kb on - strand at 355.244 kb on - strand, within EX28DRAFT_0383 at 355.244 kb on - strand, within EX28DRAFT_0383 at 355.251 kb on + strand, within EX28DRAFT_0383 at 355.432 kb on - strand, within EX28DRAFT_0383 at 355.536 kb on + strand, within EX28DRAFT_0383 at 355.725 kb on + strand, within EX28DRAFT_0383 at 355.726 kb on - strand, within EX28DRAFT_0383 at 355.754 kb on - strand, within EX28DRAFT_0383 at 355.764 kb on + strand, within EX28DRAFT_0383 at 355.764 kb on + strand, within EX28DRAFT_0383 at 355.878 kb on + strand, within EX28DRAFT_0383
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 353,329 + EX28DRAFT_0381 0.52 -0.4 353,330 - EX28DRAFT_0381 0.52 +0.1 353,450 - EX28DRAFT_0381 0.60 -0.2 353,501 + EX28DRAFT_0381 0.63 -1.4 353,658 - EX28DRAFT_0381 0.73 -0.9 353,658 - EX28DRAFT_0381 0.73 -0.4 354,065 - +0.4 354,089 - -0.2 354,412 + EX28DRAFT_0382 0.32 -0.3 354,611 - EX28DRAFT_0382 0.51 +0.9 354,611 - EX28DRAFT_0382 0.51 -0.4 354,797 + EX28DRAFT_0382 0.69 +2.6 354,798 - EX28DRAFT_0382 0.69 +1.3 354,798 - EX28DRAFT_0382 0.69 -0.1 355,150 + +0.1 355,152 + -0.7 355,153 - +0.5 355,201 + +0.6 355,203 + -1.1 355,204 - -0.2 355,244 - EX28DRAFT_0383 0.12 -1.9 355,244 - EX28DRAFT_0383 0.12 -1.2 355,251 + EX28DRAFT_0383 0.13 -0.8 355,432 - EX28DRAFT_0383 0.29 -0.4 355,536 + EX28DRAFT_0383 0.39 +0.3 355,725 + EX28DRAFT_0383 0.56 +1.4 355,726 - EX28DRAFT_0383 0.56 -1.4 355,754 - EX28DRAFT_0383 0.59 -0.5 355,764 + EX28DRAFT_0383 0.60 -0.5 355,764 + EX28DRAFT_0383 0.60 +0.0 355,878 + EX28DRAFT_0383 0.70 +0.2
Or see this region's nucleotide sequence