Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0220 and EX28DRAFT_0221 overlap by 4 nucleotides EX28DRAFT_0221 and EX28DRAFT_0222 are separated by 186 nucleotides EX28DRAFT_0222 and EX28DRAFT_0223 are separated by 3 nucleotides EX28DRAFT_0223 and EX28DRAFT_0224 are separated by 48 nucleotides EX28DRAFT_0224 and EX28DRAFT_0225 are separated by 258 nucleotides
EX28DRAFT_0220: EX28DRAFT_0220 - Transcriptional regulator, at 174,638 to 175,582
_0220
EX28DRAFT_0221: EX28DRAFT_0221 - FlxA-like protein, at 175,579 to 175,917
_0221
EX28DRAFT_0222: EX28DRAFT_0222 - tRNA, at 176,104 to 176,179
_0222
EX28DRAFT_0223: EX28DRAFT_0223 - tRNA, at 176,183 to 176,258
_0223
EX28DRAFT_0224: EX28DRAFT_0224 - tRNA, at 176,307 to 176,379
_0224
EX28DRAFT_0225: EX28DRAFT_0225 - glutamyl-tRNA synthetase, bacterial family, at 176,638 to 178,053
_0225
Position (kb) 175
176 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 174.584 kb on - strand at 174.660 kb on + strand at 174.660 kb on + strand at 174.673 kb on + strand at 174.673 kb on + strand at 174.980 kb on - strand, within EX28DRAFT_0220 at 175.290 kb on + strand, within EX28DRAFT_0220 at 175.344 kb on + strand, within EX28DRAFT_0220 at 175.498 kb on + strand at 175.580 kb on + strand at 175.580 kb on + strand at 175.581 kb on - strand at 175.581 kb on - strand at 175.586 kb on + strand at 175.618 kb on - strand, within EX28DRAFT_0221 at 175.621 kb on + strand, within EX28DRAFT_0221 at 175.918 kb on - strand at 175.936 kb on - strand at 175.965 kb on - strand at 175.984 kb on + strand at 176.008 kb on - strand at 176.019 kb on - strand at 176.055 kb on - strand at 176.271 kb on + strand at 176.272 kb on - strand at 176.272 kb on - strand at 176.275 kb on + strand at 176.276 kb on - strand at 176.276 kb on - strand at 176.360 kb on - strand, within EX28DRAFT_0224 at 176.444 kb on - strand at 176.444 kb on - strand at 176.457 kb on - strand at 176.619 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 174,584 - +0.0 174,660 + +0.7 174,660 + +0.4 174,673 + -0.4 174,673 + +0.0 174,980 - EX28DRAFT_0220 0.36 -0.4 175,290 + EX28DRAFT_0220 0.69 +0.5 175,344 + EX28DRAFT_0220 0.75 +0.2 175,498 + +0.3 175,580 + -0.1 175,580 + -0.6 175,581 - +0.2 175,581 - +0.2 175,586 + +0.4 175,618 - EX28DRAFT_0221 0.12 +0.9 175,621 + EX28DRAFT_0221 0.12 +0.0 175,918 - +0.6 175,936 - -0.1 175,965 - +0.1 175,984 + -0.5 176,008 - +1.1 176,019 - -0.5 176,055 - -3.2 176,271 + +0.1 176,272 - -0.6 176,272 - -0.7 176,275 + -0.7 176,276 - +0.1 176,276 - +0.5 176,360 - EX28DRAFT_0224 0.73 +1.0 176,444 - -0.1 176,444 - -0.6 176,457 - +0.3 176,619 + -0.7
Or see this region's nucleotide sequence