Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0063 and EX28DRAFT_0064 are separated by 35 nucleotides EX28DRAFT_0064 and EX28DRAFT_0065 are separated by 69 nucleotides EX28DRAFT_0065 and EX28DRAFT_0066 are separated by 204 nucleotides
EX28DRAFT_0063: EX28DRAFT_0063 - Acyl-CoA synthetase (NDP forming), at 3,648 to 6,311
_0063
EX28DRAFT_0064: EX28DRAFT_0064 - Uncharacterized conserved protein, at 6,347 to 7,045
_0064
EX28DRAFT_0065: EX28DRAFT_0065 - thioredoxin, at 7,115 to 7,534
_0065
EX28DRAFT_0066: EX28DRAFT_0066 - rRNA methylases, at 7,739 to 8,869
_0066
Position (kb)
6
7
8 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5.693 kb on - strand, within EX28DRAFT_0063 at 6.017 kb on + strand, within EX28DRAFT_0063 at 6.018 kb on - strand, within EX28DRAFT_0063 at 6.018 kb on - strand, within EX28DRAFT_0063 at 6.018 kb on - strand, within EX28DRAFT_0063 at 6.069 kb on - strand at 6.083 kb on + strand at 6.158 kb on + strand at 6.159 kb on - strand at 6.160 kb on + strand at 6.160 kb on + strand at 6.160 kb on + strand at 6.161 kb on - strand at 6.191 kb on + strand at 6.349 kb on - strand at 6.386 kb on - strand at 6.409 kb on - strand at 6.706 kb on - strand, within EX28DRAFT_0064 at 6.706 kb on - strand, within EX28DRAFT_0064 at 6.727 kb on + strand, within EX28DRAFT_0064 at 6.728 kb on - strand, within EX28DRAFT_0064 at 6.965 kb on - strand, within EX28DRAFT_0064 at 7.439 kb on + strand, within EX28DRAFT_0065 at 7.502 kb on - strand at 7.523 kb on + strand at 7.523 kb on + strand at 7.524 kb on - strand at 7.524 kb on - strand at 7.524 kb on - strand at 7.529 kb on - strand at 7.534 kb on + strand at 7.535 kb on - strand at 7.539 kb on - strand at 7.590 kb on + strand at 7.590 kb on + strand at 7.590 kb on + strand at 7.591 kb on - strand at 7.595 kb on + strand at 7.596 kb on - strand at 7.599 kb on + strand at 7.599 kb on + strand at 7.600 kb on - strand at 7.600 kb on - strand at 7.627 kb on + strand at 7.637 kb on - strand at 7.652 kb on + strand at 7.653 kb on - strand at 7.653 kb on - strand at 7.676 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.784 kb on + strand at 7.785 kb on - strand at 7.785 kb on - strand at 7.810 kb on + strand at 7.907 kb on - strand, within EX28DRAFT_0066
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 5,693 - EX28DRAFT_0063 0.77 -0.6 6,017 + EX28DRAFT_0063 0.89 -0.9 6,018 - EX28DRAFT_0063 0.89 +0.3 6,018 - EX28DRAFT_0063 0.89 -0.1 6,018 - EX28DRAFT_0063 0.89 +0.4 6,069 - -0.3 6,083 + +0.3 6,158 + +0.3 6,159 - -2.1 6,160 + +0.8 6,160 + +0.4 6,160 + -3.3 6,161 - -0.7 6,191 + +0.7 6,349 - +0.2 6,386 - -0.5 6,409 - +0.3 6,706 - EX28DRAFT_0064 0.51 -0.0 6,706 - EX28DRAFT_0064 0.51 -0.1 6,727 + EX28DRAFT_0064 0.54 -0.2 6,728 - EX28DRAFT_0064 0.55 -0.3 6,965 - EX28DRAFT_0064 0.88 +0.4 7,439 + EX28DRAFT_0065 0.77 +0.9 7,502 - -0.1 7,523 + -0.1 7,523 + +0.4 7,524 - +0.1 7,524 - +0.3 7,524 - -0.4 7,529 - -0.0 7,534 + -0.5 7,535 - +1.1 7,539 - -1.3 7,590 + +0.1 7,590 + +0.5 7,590 + -0.3 7,591 - +1.5 7,595 + -0.1 7,596 - -0.0 7,599 + -0.3 7,599 + +0.5 7,600 - -0.4 7,600 - +0.2 7,627 + -0.0 7,637 - +0.8 7,652 + -0.0 7,653 - +0.3 7,653 - -0.6 7,676 + +0.5 7,784 + -1.1 7,784 + +0.5 7,784 + +0.5 7,784 + +1.0 7,784 + +0.6 7,784 + +0.8 7,784 + +0.1 7,784 + +0.1 7,785 - +0.1 7,785 - +0.1 7,810 + -2.1 7,907 - EX28DRAFT_0066 0.15 +0.7
Or see this region's nucleotide sequence