Experiment: MS_media with arsenate 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0062 and EX28DRAFT_0063 are separated by 110 nucleotides EX28DRAFT_0063 and EX28DRAFT_0064 are separated by 35 nucleotides EX28DRAFT_0064 and EX28DRAFT_0065 are separated by 69 nucleotides
EX28DRAFT_0062: EX28DRAFT_0062 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes, at 2,182 to 3,537
_0062
EX28DRAFT_0063: EX28DRAFT_0063 - Acyl-CoA synthetase (NDP forming), at 3,648 to 6,311
_0063
EX28DRAFT_0064: EX28DRAFT_0064 - Uncharacterized conserved protein, at 6,347 to 7,045
_0064
EX28DRAFT_0065: EX28DRAFT_0065 - thioredoxin, at 7,115 to 7,534
_0065
Position (kb)
3
4
5
6
7 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3.578 kb on - strand at 3.644 kb on + strand at 3.649 kb on + strand at 3.696 kb on - strand at 3.765 kb on - strand at 3.770 kb on + strand at 3.771 kb on - strand at 3.771 kb on - strand at 3.771 kb on - strand at 3.774 kb on - strand at 3.810 kb on - strand at 3.811 kb on + strand at 3.812 kb on - strand at 4.058 kb on - strand, within EX28DRAFT_0063 at 4.691 kb on - strand, within EX28DRAFT_0063 at 4.691 kb on - strand, within EX28DRAFT_0063 at 4.692 kb on + strand, within EX28DRAFT_0063 at 4.692 kb on + strand, within EX28DRAFT_0063 at 4.692 kb on + strand, within EX28DRAFT_0063 at 4.698 kb on - strand, within EX28DRAFT_0063 at 4.698 kb on - strand, within EX28DRAFT_0063 at 4.718 kb on + strand, within EX28DRAFT_0063 at 4.778 kb on + strand, within EX28DRAFT_0063 at 4.779 kb on - strand, within EX28DRAFT_0063 at 4.997 kb on + strand, within EX28DRAFT_0063 at 5.003 kb on + strand, within EX28DRAFT_0063 at 5.003 kb on + strand, within EX28DRAFT_0063 at 5.003 kb on + strand, within EX28DRAFT_0063 at 5.003 kb on + strand, within EX28DRAFT_0063 at 5.003 kb on + strand, within EX28DRAFT_0063 at 5.004 kb on - strand, within EX28DRAFT_0063 at 5.119 kb on + strand, within EX28DRAFT_0063 at 5.119 kb on + strand, within EX28DRAFT_0063 at 5.119 kb on + strand, within EX28DRAFT_0063 at 5.120 kb on - strand, within EX28DRAFT_0063 at 5.120 kb on - strand, within EX28DRAFT_0063 at 5.120 kb on - strand, within EX28DRAFT_0063 at 5.260 kb on + strand, within EX28DRAFT_0063 at 5.261 kb on - strand, within EX28DRAFT_0063 at 5.693 kb on - strand, within EX28DRAFT_0063 at 6.017 kb on + strand, within EX28DRAFT_0063 at 6.018 kb on - strand, within EX28DRAFT_0063 at 6.018 kb on - strand, within EX28DRAFT_0063 at 6.018 kb on - strand, within EX28DRAFT_0063 at 6.069 kb on - strand at 6.083 kb on + strand at 6.158 kb on + strand at 6.159 kb on - strand at 6.160 kb on + strand at 6.160 kb on + strand at 6.160 kb on + strand at 6.161 kb on - strand at 6.191 kb on + strand at 6.349 kb on - strand at 6.386 kb on - strand at 6.409 kb on - strand at 6.706 kb on - strand, within EX28DRAFT_0064 at 6.706 kb on - strand, within EX28DRAFT_0064 at 6.727 kb on + strand, within EX28DRAFT_0064 at 6.728 kb on - strand, within EX28DRAFT_0064 at 6.965 kb on - strand, within EX28DRAFT_0064
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with arsenate 5 mM remove 3,578 - -0.1 3,644 + -0.6 3,649 + -0.6 3,696 - +0.3 3,765 - -0.1 3,770 + -0.6 3,771 - -0.4 3,771 - +0.4 3,771 - +0.4 3,774 - +0.6 3,810 - +0.7 3,811 + -0.8 3,812 - -0.1 4,058 - EX28DRAFT_0063 0.15 -0.7 4,691 - EX28DRAFT_0063 0.39 -0.7 4,691 - EX28DRAFT_0063 0.39 +0.1 4,692 + EX28DRAFT_0063 0.39 -0.2 4,692 + EX28DRAFT_0063 0.39 -0.2 4,692 + EX28DRAFT_0063 0.39 -0.2 4,698 - EX28DRAFT_0063 0.39 +1.4 4,698 - EX28DRAFT_0063 0.39 -0.0 4,718 + EX28DRAFT_0063 0.40 -0.1 4,778 + EX28DRAFT_0063 0.42 -0.7 4,779 - EX28DRAFT_0063 0.42 +0.4 4,997 + EX28DRAFT_0063 0.51 -0.5 5,003 + EX28DRAFT_0063 0.51 -0.0 5,003 + EX28DRAFT_0063 0.51 +0.2 5,003 + EX28DRAFT_0063 0.51 -0.3 5,003 + EX28DRAFT_0063 0.51 +0.1 5,003 + EX28DRAFT_0063 0.51 +0.2 5,004 - EX28DRAFT_0063 0.51 +0.4 5,119 + EX28DRAFT_0063 0.55 +0.7 5,119 + EX28DRAFT_0063 0.55 +0.6 5,119 + EX28DRAFT_0063 0.55 -0.1 5,120 - EX28DRAFT_0063 0.55 -1.4 5,120 - EX28DRAFT_0063 0.55 -0.0 5,120 - EX28DRAFT_0063 0.55 +0.8 5,260 + EX28DRAFT_0063 0.61 -0.0 5,261 - EX28DRAFT_0063 0.61 +0.1 5,693 - EX28DRAFT_0063 0.77 -0.6 6,017 + EX28DRAFT_0063 0.89 -0.9 6,018 - EX28DRAFT_0063 0.89 +0.3 6,018 - EX28DRAFT_0063 0.89 -0.1 6,018 - EX28DRAFT_0063 0.89 +0.4 6,069 - -0.3 6,083 + +0.3 6,158 + +0.3 6,159 - -2.1 6,160 + +0.8 6,160 + +0.4 6,160 + -3.3 6,161 - -0.7 6,191 + +0.7 6,349 - +0.2 6,386 - -0.5 6,409 - +0.3 6,706 - EX28DRAFT_0064 0.51 -0.0 6,706 - EX28DRAFT_0064 0.51 -0.1 6,727 + EX28DRAFT_0064 0.54 -0.2 6,728 - EX28DRAFT_0064 0.55 -0.3 6,965 - EX28DRAFT_0064 0.88 +0.4
Or see this region's nucleotide sequence