Experiment: m.b. nitrite 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21080 and CA264_21085 are separated by 43 nucleotides CA264_21085 and CA264_21090 are separated by 9 nucleotides CA264_21090 and CA264_21095 are separated by 85 nucleotides
CA264_21080: CA264_21080 - heavy metal translocating P-type ATPase, at 79,185 to 81,212
_21080
CA264_21085: CA264_21085 - hypothetical protein, at 81,256 to 81,654
_21085
CA264_21090: CA264_21090 - hypothetical protein, at 81,664 to 81,999
_21090
CA264_21095: CA264_21095 - heavy metal translocating P-type ATPase, at 82,085 to 84,604
_21095
Position (kb) 81
82 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 80.664 kb on - strand, within CA264_21080 at 80.834 kb on - strand, within CA264_21080 at 80.882 kb on - strand, within CA264_21080 at 80.882 kb on - strand, within CA264_21080 at 80.926 kb on + strand, within CA264_21080 at 80.926 kb on + strand, within CA264_21080 at 80.927 kb on - strand, within CA264_21080 at 81.100 kb on + strand at 81.139 kb on + strand at 81.173 kb on - strand at 81.177 kb on - strand at 81.177 kb on - strand at 81.177 kb on - strand at 81.228 kb on - strand at 81.244 kb on + strand at 81.244 kb on + strand at 81.245 kb on - strand at 81.245 kb on - strand at 81.254 kb on - strand at 81.254 kb on - strand at 81.254 kb on - strand at 81.288 kb on + strand at 81.300 kb on + strand, within CA264_21085 at 81.351 kb on + strand, within CA264_21085 at 81.351 kb on + strand, within CA264_21085 at 81.356 kb on - strand, within CA264_21085 at 81.376 kb on + strand, within CA264_21085 at 81.376 kb on + strand, within CA264_21085 at 81.418 kb on - strand, within CA264_21085 at 81.452 kb on - strand, within CA264_21085 at 81.535 kb on + strand, within CA264_21085 at 81.535 kb on + strand, within CA264_21085 at 81.536 kb on - strand, within CA264_21085 at 81.546 kb on - strand, within CA264_21085 at 81.572 kb on - strand at 81.572 kb on - strand, within CA264_21085 at 81.618 kb on + strand at 81.619 kb on - strand at 81.638 kb on + strand at 81.710 kb on - strand, within CA264_21090 at 81.744 kb on - strand, within CA264_21090 at 81.744 kb on - strand, within CA264_21090 at 81.847 kb on + strand, within CA264_21090 at 81.847 kb on + strand, within CA264_21090 at 81.847 kb on + strand, within CA264_21090 at 81.848 kb on - strand, within CA264_21090 at 81.869 kb on - strand, within CA264_21090 at 81.877 kb on - strand, within CA264_21090 at 81.877 kb on - strand, within CA264_21090 at 81.966 kb on + strand at 81.967 kb on - strand at 82.032 kb on + strand at 82.032 kb on + strand at 82.033 kb on - strand at 82.051 kb on + strand at 82.052 kb on - strand at 82.060 kb on - strand at 82.060 kb on - strand at 82.076 kb on - strand at 82.078 kb on - strand at 82.191 kb on + strand at 82.200 kb on + strand at 82.200 kb on + strand at 82.201 kb on - strand at 82.250 kb on + strand at 82.478 kb on - strand, within CA264_21095 at 82.516 kb on - strand, within CA264_21095 at 82.776 kb on + strand, within CA264_21095 at 82.784 kb on + strand, within CA264_21095 at 82.784 kb on + strand, within CA264_21095 at 82.784 kb on + strand, within CA264_21095 at 82.785 kb on - strand, within CA264_21095 at 82.785 kb on - strand, within CA264_21095 at 82.843 kb on - strand, within CA264_21095 at 82.843 kb on - strand, within CA264_21095 at 82.847 kb on - strand, within CA264_21095 at 82.901 kb on - strand, within CA264_21095 at 82.970 kb on + strand, within CA264_21095 at 82.970 kb on + strand, within CA264_21095 at 82.982 kb on - strand, within CA264_21095
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. nitrite 30 mM remove 80,664 - CA264_21080 0.73 +0.1 80,834 - CA264_21080 0.81 +0.3 80,882 - CA264_21080 0.84 +0.0 80,882 - CA264_21080 0.84 -0.6 80,926 + CA264_21080 0.86 -0.1 80,926 + CA264_21080 0.86 -0.8 80,927 - CA264_21080 0.86 +0.1 81,100 + -0.2 81,139 + +0.1 81,173 - +0.4 81,177 - +0.4 81,177 - +0.1 81,177 - +0.8 81,228 - +0.1 81,244 + -0.0 81,244 + +0.0 81,245 - +0.3 81,245 - +0.2 81,254 - +1.1 81,254 - +0.2 81,254 - -0.4 81,288 + -1.0 81,300 + CA264_21085 0.11 +1.0 81,351 + CA264_21085 0.24 -0.7 81,351 + CA264_21085 0.24 +0.8 81,356 - CA264_21085 0.25 -0.2 81,376 + CA264_21085 0.30 -0.3 81,376 + CA264_21085 0.30 +1.4 81,418 - CA264_21085 0.41 -0.5 81,452 - CA264_21085 0.49 +0.2 81,535 + CA264_21085 0.70 +0.5 81,535 + CA264_21085 0.70 -0.2 81,536 - CA264_21085 0.70 -0.7 81,546 - CA264_21085 0.73 +3.4 81,572 - +0.2 81,572 - CA264_21085 0.79 +0.4 81,618 + -1.3 81,619 - +0.6 81,638 + -1.1 81,710 - CA264_21090 0.14 +0.4 81,744 - CA264_21090 0.24 +1.0 81,744 - CA264_21090 0.24 -0.5 81,847 + CA264_21090 0.54 -0.0 81,847 + CA264_21090 0.54 -0.3 81,847 + CA264_21090 0.54 +0.0 81,848 - CA264_21090 0.55 -0.2 81,869 - CA264_21090 0.61 +0.5 81,877 - CA264_21090 0.63 -1.9 81,877 - CA264_21090 0.63 +2.0 81,966 + -1.0 81,967 - -1.4 82,032 + -2.4 82,032 + +1.0 82,033 - -0.1 82,051 + -2.0 82,052 - -0.0 82,060 - +1.2 82,060 - -0.3 82,076 - +0.1 82,078 - +0.2 82,191 + -0.2 82,200 + -0.4 82,200 + +1.4 82,201 - -1.0 82,250 + +1.7 82,478 - CA264_21095 0.16 -0.5 82,516 - CA264_21095 0.17 +0.7 82,776 + CA264_21095 0.27 -1.1 82,784 + CA264_21095 0.28 -0.3 82,784 + CA264_21095 0.28 -1.4 82,784 + CA264_21095 0.28 -0.2 82,785 - CA264_21095 0.28 +0.6 82,785 - CA264_21095 0.28 +0.0 82,843 - CA264_21095 0.30 +0.4 82,843 - CA264_21095 0.30 +0.0 82,847 - CA264_21095 0.30 +0.4 82,901 - CA264_21095 0.32 +0.5 82,970 + CA264_21095 0.35 +0.1 82,970 + CA264_21095 0.35 +2.2 82,982 - CA264_21095 0.36 +0.1
Or see this region's nucleotide sequence