Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15050

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
3,531,778	-		CA264_15045	0.30	+0.7
3,531,882	+		CA264_15045	0.39	+1.0
3,531,888	-		CA264_15045	0.39	+0.4
3,531,888	-		CA264_15045	0.39	+0.1
3,531,969	+		CA264_15045	0.46	+1.2
3,531,970	-		CA264_15045	0.46	-0.1
3,531,974	-		CA264_15045	0.47	+0.5
3,531,974	-		CA264_15045	0.47	+0.2
3,531,974	-		CA264_15045	0.47	+1.0
3,532,140	+		CA264_15045	0.61	+1.0
3,532,202	-		CA264_15045	0.66	+0.4
3,532,253	+		CA264_15045	0.70	+0.8
3,532,488	+				+1.8
3,532,489	-				+1.1
3,532,489	-				+1.7
3,532,586	+				+0.1
3,532,587	-				+0.5
3,532,588	+				+0.1
3,532,589	-				+0.4
3,532,589	-				-0.9
3,532,589	-				+0.1
3,532,615	+				-1.0
3,532,617	+				-0.9
3,532,622	+				+0.9
3,532,622	+				-0.2
3,532,622	+				-0.0
3,532,623	-				-1.1
3,532,623	-				-0.2
3,532,623	-				-1.1
3,532,625	-				-0.4
3,532,657	+				+0.3
3,532,658	-				+0.7
3,532,791	+				+0.4
3,532,831	+				+0.4
3,532,831	+				-0.2
3,532,832	-				-0.4
3,532,834	-				+0.4
3,532,873	+				+0.2
3,532,873	+				-1.6
3,532,874	-				-0.1
3,532,877	+		CA264_15050	0.10	-0.4
3,532,878	-		CA264_15050	0.10	-0.1
3,532,945	+		CA264_15050	0.13	+1.8
3,532,945	+		CA264_15050	0.13	+0.2
3,532,949	+		CA264_15050	0.13	+0.3
3,532,949	+		CA264_15050	0.13	+1.1
3,532,949	+		CA264_15050	0.13	+0.1
3,532,950	-		CA264_15050	0.13	-0.6
3,533,017	+		CA264_15050	0.16	+0.7
3,533,018	-		CA264_15050	0.16	+0.1
3,533,018	-		CA264_15050	0.16	+0.6
3,533,019	+		CA264_15050	0.16	+0.3
3,533,019	+		CA264_15050	0.16	+0.5
3,533,019	+		CA264_15050	0.16	+0.4
3,533,019	+		CA264_15050	0.16	-0.0
3,533,024	+		CA264_15050	0.16	+0.6
3,533,025	-		CA264_15050	0.16	+0.1
3,533,051	-		CA264_15050	0.17	+1.3
3,533,059	+		CA264_15050	0.18	+1.0
3,533,065	+		CA264_15050	0.18	+1.0
3,533,065	+		CA264_15050	0.18	-0.9
3,533,101	-		CA264_15050	0.19	-0.5
3,533,121	+		CA264_15050	0.20	+0.6
3,533,121	+		CA264_15050	0.20	+0.0
3,533,122	-		CA264_15050	0.20	+0.6
3,533,122	-		CA264_15050	0.20	-1.6
3,533,122	-		CA264_15050	0.20	+0.3
3,533,126	-		CA264_15050	0.20	-0.1
3,533,180	+		CA264_15050	0.23	-0.1
3,533,180	+		CA264_15050	0.23	+0.9
3,533,193	-		CA264_15050	0.23	-0.3
3,533,205	+		CA264_15050	0.24	+0.2
3,533,205	+		CA264_15050	0.24	-0.1
3,533,206	-		CA264_15050	0.24	-0.8
3,533,206	-		CA264_15050	0.24	+0.9
3,533,288	+		CA264_15050	0.27	+1.0
3,533,289	-		CA264_15050	0.27	+0.4
3,533,289	-		CA264_15050	0.27	-0.2
3,533,297	+		CA264_15050	0.28	+1.1
3,533,364	+		CA264_15050	0.30	+1.6
3,533,364	+		CA264_15050	0.30	+0.5
3,533,365	-		CA264_15050	0.30	-0.9
3,533,382	+		CA264_15050	0.31	+0.5
3,533,382	+		CA264_15050	0.31	+0.4
3,533,382	+		CA264_15050	0.31	-0.3
3,533,382	+		CA264_15050	0.31	+1.8
3,533,382	+		CA264_15050	0.31	+0.5
3,533,388	+		CA264_15050	0.31	+0.2
3,533,388	+		CA264_15050	0.31	+1.3
3,533,388	+		CA264_15050	0.31	+1.2
3,533,388	+		CA264_15050	0.31	+0.0
3,533,389	-		CA264_15050	0.31	+0.4
3,533,389	-		CA264_15050	0.31	+0.3
3,533,389	-		CA264_15050	0.31	-1.0
3,533,389	-		CA264_15050	0.31	+0.3
3,533,389	-		CA264_15050	0.31	+0.0
3,533,393	-		CA264_15050	0.32	-0.5
3,533,441	+		CA264_15050	0.34	+0.5
3,533,477	-		CA264_15050	0.35	-0.3
3,533,515	+		CA264_15050	0.37	+0.5
3,533,515	+		CA264_15050	0.37	+1.8
3,533,516	-		CA264_15050	0.37	+0.5
3,533,656	-		CA264_15050	0.43	+1.2
3,533,677	-		CA264_15050	0.43	+0.8
3,533,700	-		CA264_15050	0.44	+0.3
3,533,700	-		CA264_15050	0.44	+0.2
3,533,707	-		CA264_15050	0.45	+0.3
3,533,758	+		CA264_15050	0.47	+0.2
3,533,759	-		CA264_15050	0.47	-0.2
3,533,759	-		CA264_15050	0.47	+0.4
3,533,759	-		CA264_15050	0.47	-0.6
3,533,759	-		CA264_15050	0.47	-0.1
3,533,761	-		CA264_15050	0.47	-1.0
3,533,777	-		CA264_15050	0.48	-0.4
3,533,897	-		CA264_15050	0.53	-0.4
3,533,902	+		CA264_15050	0.53	+0.2
3,534,140	-		CA264_15050	0.63	-0.0
3,534,177	+		CA264_15050	0.64	+0.1
3,534,177	+		CA264_15050	0.64	+0.1
3,534,178	-		CA264_15050	0.64	+0.2
3,534,229	-		CA264_15050	0.66	+0.6
3,534,269	+		CA264_15050	0.68	-0.3
3,534,269	+		CA264_15050	0.68	+1.6
3,534,270	-		CA264_15050	0.68	-1.1
3,534,270	-		CA264_15050	0.68	+0.6
3,534,270	-		CA264_15050	0.68	-0.8
3,534,270	-		CA264_15050	0.68	+0.1
3,534,270	-		CA264_15050	0.68	+0.4
3,534,313	+		CA264_15050	0.70	+0.2
3,534,342	-		CA264_15050	0.71	+1.4
3,534,390	+		CA264_15050	0.73	+0.4
3,534,390	+		CA264_15050	0.73	-2.4
3,534,391	-		CA264_15050	0.73	+0.4
3,534,394	+		CA264_15050	0.73	+1.4
3,534,395	-		CA264_15050	0.73	-0.8
3,534,424	+		CA264_15050	0.74	+1.6
3,534,437	+		CA264_15050	0.75	+0.3
3,534,443	-		CA264_15050	0.75	+0.1
3,534,449	-		CA264_15050	0.76	+0.0
3,534,457	-		CA264_15050	0.76	+0.3
3,534,458	+		CA264_15050	0.76	-0.1
3,534,458	+		CA264_15050	0.76	+1.3
3,534,459	-		CA264_15050	0.76	+0.3
3,534,459	-		CA264_15050	0.76	+0.2
3,534,459	-		CA264_15050	0.76	+0.7
3,534,459	-		CA264_15050	0.76	-1.7
3,534,468	+		CA264_15050	0.76	+0.8
3,534,489	-		CA264_15050	0.77	-0.1
3,534,489	-		CA264_15050	0.77	-0.2
3,534,511	+		CA264_15050	0.78	+0.2
3,534,512	-		CA264_15050	0.78	-1.0
3,534,515	+		CA264_15050	0.78	-0.3
3,534,515	+		CA264_15050	0.78	-0.2
3,534,516	-		CA264_15050	0.78	+0.7
3,534,516	-		CA264_15050	0.78	+0.1
3,534,517	+		CA264_15050	0.78	-0.3
3,534,517	+		CA264_15050	0.78	+0.4
3,534,518	-		CA264_15050	0.78	-0.9
3,534,551	-		CA264_15050	0.80	+0.2
3,534,631	+		CA264_15050	0.83	+2.0
3,534,634	+		CA264_15050	0.83	-0.6
3,534,643	+		CA264_15050	0.84	+0.5
3,534,644	-		CA264_15050	0.84	-0.1
3,534,644	-		CA264_15050	0.84	-1.3
3,534,644	-		CA264_15050	0.84	+0.7
3,534,644	-		CA264_15050	0.84	-0.0
3,534,644	-		CA264_15050	0.84	+0.2
3,534,754	+		CA264_15050	0.88	+0.4
3,534,754	+		CA264_15050	0.88	+0.5
3,534,755	-		CA264_15050	0.88	+1.2
3,534,770	-		CA264_15050	0.89	+0.1
3,534,826	+				+0.0
3,534,827	-				-0.1
3,534,829	+				-0.4
3,534,829	+				+0.2
3,534,959	-				+0.2
3,535,004	+				+0.1
3,535,025	+				-2.0
3,535,036	+				+0.6
3,535,041	+				-0.1
3,535,042	-				+1.7
3,535,045	+				+0.4
3,535,045	+				-0.4
3,535,045	+				-0.1
3,535,045	+				+0.3
3,535,046	-				-0.1
3,535,047	+				-0.2
3,535,047	+				+1.4
3,535,047	+				+0.8
3,535,047	+				-0.1
3,535,047	+				-0.3
3,535,048	-				-0.1
3,535,062	+				+0.4
3,535,094	+				+0.2
3,535,107	-		CA264_15055	0.11	-0.6
3,535,262	-		CA264_15055	0.46	+1.3
3,535,263	+		CA264_15055	0.46	+0.6
3,535,263	+		CA264_15055	0.46	+0.1
3,535,264	-		CA264_15055	0.47	-0.4
3,535,267	+		CA264_15055	0.47	-0.4
3,535,268	-		CA264_15055	0.48	+0.0
3,535,337	+		CA264_15055	0.63	-0.2
3,535,382	+		CA264_15055	0.74	-0.7
3,535,383	-		CA264_15055	0.74	-0.6
3,535,402	+		CA264_15055	0.78	+0.5
3,535,402	+		CA264_15055	0.78	+0.7
3,535,402	+		CA264_15055	0.78	-0.2
3,535,402	+		CA264_15055	0.78	+0.0
3,535,403	-		CA264_15055	0.79	+1.4
3,535,403	-		CA264_15055	0.79	+0.9
3,535,432	-		CA264_15055	0.85	-0.3
3,535,462	+				-0.1
3,535,470	+				-0.4
3,535,475	+				+0.8
3,535,511	-				-0.4
3,535,520	-				-0.0
3,535,601	+				-0.6
3,535,602	-				-1.0
3,535,603	+				-2.4
3,535,610	+				-0.6
3,535,618	+				-0.3
3,535,618	+				-0.2
3,535,622	+				-0.1
3,535,625	-				+0.0
3,535,628	-				-0.1
3,535,648	+				-1.1
3,535,648	+				-0.8
3,535,651	+				-0.4
3,535,733	+				-0.1
3,535,757	-				+0.0
3,535,758	+				-0.7
3,535,759	-				-1.4
3,535,759	-				-0.2
3,535,763	-				+0.6
3,535,769	-				-0.4
3,535,769	-				-0.8
3,535,780	+				-0.0
3,535,780	+				+0.3
3,535,781	-				-0.5
3,535,815	+				+0.2
3,535,910	+				-0.8
3,535,912	+				-0.3
3,535,912	+				-0.6
3,535,912	+				+0.4
3,535,914	+				-0.2
3,535,914	+				+0.3
3,535,914	+				+0.1
3,535,915	-				-0.1
3,535,918	-				-0.4
3,536,027	-				+0.1
3,536,027	-				+0.3