Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10910

Experiment: m.b. nitrite 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. nitrite 30 mM
2,518,231	+				+0.1
2,518,232	-				+0.1
2,518,232	-				+0.8
2,518,259	-				-0.2
2,518,259	-				-0.2
2,518,263	+				-0.0
2,518,263	+				+0.2
2,518,263	+				+0.2
2,518,264	-				-0.7
2,518,264	-				-0.3
2,518,264	-				+0.0
2,518,264	-				-1.4
2,518,284	+				-0.1
2,518,308	+				-1.4
2,518,326	+				+1.2
2,518,332	+				+0.1
2,518,332	+				+0.7
2,518,333	-				+0.4
2,518,339	+				+0.3
2,518,345	+				-0.4
2,518,346	-				-0.2
2,518,362	+		CA264_10905	0.11	+1.5
2,518,363	-		CA264_10905	0.11	+0.3
2,518,407	-		CA264_10905	0.16	+0.5
2,518,410	-		CA264_10905	0.16	-0.1
2,518,411	+		CA264_10905	0.16	+0.1
2,518,412	-		CA264_10905	0.17	-0.4
2,518,412	-		CA264_10905	0.17	+0.9
2,518,412	-		CA264_10905	0.17	+0.2
2,518,412	-		CA264_10905	0.17	-0.1
2,518,415	+		CA264_10905	0.17	+0.6
2,518,415	+		CA264_10905	0.17	+0.3
2,518,416	-		CA264_10905	0.17	-0.5
2,518,416	-		CA264_10905	0.17	+0.0
2,518,416	-		CA264_10905	0.17	+0.1
2,518,505	-		CA264_10905	0.28	-0.2
2,518,524	+		CA264_10905	0.30	+0.4
2,518,525	-		CA264_10905	0.30	-0.1
2,518,525	-		CA264_10905	0.30	+0.9
2,518,725	-		CA264_10905	0.54	+0.5
2,518,725	-		CA264_10905	0.54	-0.5
2,518,725	-		CA264_10905	0.54	+0.8
2,518,725	-		CA264_10905	0.54	+0.1
2,518,725	-		CA264_10905	0.54	+0.6
2,518,728	+		CA264_10905	0.54	+0.3
2,518,728	+		CA264_10905	0.54	+0.7
2,518,731	-		CA264_10905	0.55	-0.3
2,518,740	-		CA264_10905	0.56	+1.0
2,518,813	-		CA264_10905	0.65	+1.0
2,518,892	+		CA264_10905	0.74	+0.2
2,518,982	+		CA264_10905	0.85	+1.6
2,518,982	+		CA264_10905	0.85	+0.4
2,518,987	-		CA264_10905	0.85	-0.1
2,519,046	+				+0.5
2,519,046	+				+0.3
2,519,052	-				-0.3
2,519,082	+				+1.3
2,519,082	+				+0.6
2,519,082	+				+0.2
2,519,082	+				+0.6
2,519,095	-				+0.4
2,519,126	+				+1.9
2,519,126	+				+1.5
2,519,126	+				-0.7
2,519,127	-				-0.1
2,519,136	+				+1.5
2,519,137	-				+1.6
2,519,172	+				+0.6
2,519,173	-				+1.4
2,519,200	-				+0.1
2,519,249	-				-0.7
2,519,249	-				+0.5
2,519,251	+				+0.2
2,519,252	-				-0.9
2,519,339	+		CA264_10910	0.14	-2.0
2,519,378	-		CA264_10910	0.16	+1.7
2,519,389	+		CA264_10910	0.17	+0.2
2,519,407	-		CA264_10910	0.18	-0.0
2,519,502	+		CA264_10910	0.25	+0.5
2,519,503	-		CA264_10910	0.25	+0.4
2,519,504	+		CA264_10910	0.25	-0.1
2,519,504	+		CA264_10910	0.25	+0.9
2,519,504	+		CA264_10910	0.25	+0.3
2,519,505	-		CA264_10910	0.25	+0.1
2,519,508	+		CA264_10910	0.25	+0.7
2,519,508	+		CA264_10910	0.25	+1.0
2,519,508	+		CA264_10910	0.25	+0.4
2,519,508	+		CA264_10910	0.25	+0.3
2,519,508	+		CA264_10910	0.25	+0.6
2,519,509	-		CA264_10910	0.25	+0.6
2,519,511	-		CA264_10910	0.25	+0.8
2,519,511	-		CA264_10910	0.25	+0.0
2,519,514	+		CA264_10910	0.25	+0.4
2,519,514	+		CA264_10910	0.25	+0.6
2,519,515	-		CA264_10910	0.26	+0.1
2,519,608	+		CA264_10910	0.32	+1.1
2,519,608	+		CA264_10910	0.32	+0.5
2,519,608	+		CA264_10910	0.32	+0.1
2,519,609	-		CA264_10910	0.32	+2.7
2,519,609	-		CA264_10910	0.32	-0.4
2,519,609	-		CA264_10910	0.32	+0.7
2,519,609	-		CA264_10910	0.32	+0.8
2,519,695	+		CA264_10910	0.38	+1.9
2,519,696	-		CA264_10910	0.38	-0.3
2,519,900	-		CA264_10910	0.51	+0.3
2,520,001	+		CA264_10910	0.58	-1.7
2,520,001	+		CA264_10910	0.58	+0.5
2,520,002	-		CA264_10910	0.58	+0.7
2,520,016	+		CA264_10910	0.59	+0.8
2,520,016	+		CA264_10910	0.59	-0.7
2,520,016	+		CA264_10910	0.59	+0.8
2,520,016	+		CA264_10910	0.59	+0.9
2,520,078	+		CA264_10910	0.63	-0.9
2,520,110	+		CA264_10910	0.65	-0.1
2,520,174	-		CA264_10910	0.70	+0.0
2,520,174	-		CA264_10910	0.70	+0.8
2,520,200	+		CA264_10910	0.71	-0.1
2,520,215	+		CA264_10910	0.72	+0.3
2,520,230	-		CA264_10910	0.73	-0.2
2,520,235	+		CA264_10910	0.74	-0.6
2,520,235	+		CA264_10910	0.74	+0.6
2,520,236	-		CA264_10910	0.74	+0.7
2,520,236	-		CA264_10910	0.74	+0.1
2,520,364	+		CA264_10910	0.82	+0.4
2,520,365	-		CA264_10910	0.82	+2.0
2,520,391	+		CA264_10910	0.84	+0.7
2,520,423	-		CA264_10910	0.86	+0.7
2,520,427	+		CA264_10910	0.86	+0.8
2,520,428	-		CA264_10910	0.87	+0.3
2,520,475	+		CA264_10910	0.90	+0.9
2,520,480	-				+0.0
2,520,480	-				+0.7
2,520,480	-				+0.2
2,520,551	-				+0.5
2,520,613	-				+0.3
2,520,613	-				+0.7
2,520,629	+				+0.3
2,520,629	+				+1.3
2,520,629	+				+0.3
2,520,630	-				+0.8
2,520,634	-				+0.0
2,520,670	-				-0.4
2,520,708	+		CA264_10915	0.11	-2.4
2,520,735	+		CA264_10915	0.16	-2.0
2,520,735	+		CA264_10915	0.16	-0.1
2,520,735	+		CA264_10915	0.16	-2.0
2,520,735	+		CA264_10915	0.16	-0.4
2,520,764	-		CA264_10915	0.22	+0.2
2,520,778	+		CA264_10915	0.25	-2.3
2,520,779	-		CA264_10915	0.25	-2.4
2,520,779	-		CA264_10915	0.25	-2.7
2,520,779	-		CA264_10915	0.25	-2.5
2,520,781	+		CA264_10915	0.25	-1.5
2,520,781	+		CA264_10915	0.25	-1.6
2,520,782	-		CA264_10915	0.25	+0.2
2,520,782	-		CA264_10915	0.25	-0.3
2,520,782	-		CA264_10915	0.25	-0.7
2,520,894	-		CA264_10915	0.47	-2.7
2,520,897	-		CA264_10915	0.48	-2.0
2,520,901	+		CA264_10915	0.48	-2.1
2,520,951	-		CA264_10915	0.58	-3.9
2,520,951	-		CA264_10915	0.58	-1.8
2,520,955	+		CA264_10915	0.59	-2.8
2,520,956	-		CA264_10915	0.59	-0.1
2,520,956	-		CA264_10915	0.59	-1.4
2,520,959	+		CA264_10915	0.60	-1.3
2,520,960	-		CA264_10915	0.60	-1.5
2,520,960	-		CA264_10915	0.60	-3.2
2,520,962	+		CA264_10915	0.60	-2.4
2,520,963	-		CA264_10915	0.60	-1.4
2,521,095	+		CA264_10915	0.86	-3.0
2,521,182	-				+0.8
2,521,188	-				+0.1
2,521,189	+				+0.3
2,521,189	+				-0.8
2,521,190	-				+0.9
2,521,407	-				+0.4
2,521,492	+		CA264_10920	0.10	+1.3
2,521,493	-		CA264_10920	0.11	+0.9
2,521,493	-		CA264_10920	0.11	+1.5
2,521,498	+		CA264_10920	0.11	+1.1
2,521,499	-		CA264_10920	0.11	+1.6
2,521,499	-		CA264_10920	0.11	+1.0
2,521,502	+		CA264_10920	0.12	+1.0
2,521,502	+		CA264_10920	0.12	+0.2
2,521,503	-		CA264_10920	0.12	+1.5
2,521,540	+		CA264_10920	0.16	+1.3
2,521,590	-		CA264_10920	0.22	-0.8
2,521,590	-		CA264_10920	0.22	+1.2