Strain Fitness in Bosea sp. OAE506 around ABIE41_RS07775

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS07770 and ABIE41_RS07775 are separated by 31 nucleotidesABIE41_RS07775 and ABIE41_RS07780 are separated by 197 nucleotides ABIE41_RS07770: ABIE41_RS07770 - tripartite tricarboxylate transporter permease, at 1,594,110 to 1,595,615 _RS07770 ABIE41_RS07775: ABIE41_RS07775 - enoyl-CoA hydratase-related protein, at 1,595,647 to 1,596,390 _RS07775 ABIE41_RS07780: ABIE41_RS07780 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein, at 1,596,588 to 1,598,669 _RS07780 Position (kb) 1595 1596 1597Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1594.851 kb on + strand, within ABIE41_RS07770at 1594.852 kb on - strand, within ABIE41_RS07770at 1594.941 kb on + strand, within ABIE41_RS07770at 1594.941 kb on + strand, within ABIE41_RS07770at 1594.942 kb on - strand, within ABIE41_RS07770at 1594.942 kb on - strand, within ABIE41_RS07770at 1594.942 kb on - strand, within ABIE41_RS07770at 1595.115 kb on + strand, within ABIE41_RS07770at 1595.116 kb on - strand, within ABIE41_RS07770at 1595.116 kb on - strand, within ABIE41_RS07770at 1595.116 kb on - strand, within ABIE41_RS07770at 1595.116 kb on - strand, within ABIE41_RS07770at 1595.116 kb on - strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.172 kb on + strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.173 kb on - strand, within ABIE41_RS07770at 1595.181 kb on + strand, within ABIE41_RS07770at 1595.182 kb on - strand, within ABIE41_RS07770at 1595.349 kb on + strand, within ABIE41_RS07770at 1595.349 kb on + strand, within ABIE41_RS07770at 1595.349 kb on + strand, within ABIE41_RS07770at 1595.349 kb on + strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.350 kb on - strand, within ABIE41_RS07770at 1595.392 kb on - strand, within ABIE41_RS07770at 1595.967 kb on - strand, within ABIE41_RS07775at 1595.967 kb on - strand, within ABIE41_RS07775at 1596.293 kb on + strand, within ABIE41_RS07775at 1596.293 kb on + strand, within ABIE41_RS07775at 1596.293 kb on + strand, within ABIE41_RS07775at 1596.294 kb on - strand, within ABIE41_RS07775at 1596.294 kb on - strand, within ABIE41_RS07775at 1596.587 kb on + strandat 1596.587 kb on + strandat 1596.588 kb on - strandat 1596.588 kb on - strandat 1596.736 kb on + strandat 1596.736 kb on + strandat 1596.737 kb on - strandat 1596.737 kb on - strandat 1596.810 kb on + strand, within ABIE41_RS07780at 1596.810 kb on + strand, within ABIE41_RS07780at 1596.811 kb on - strand, within ABIE41_RS07780

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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1,594,851 + ABIE41_RS07770 0.49 -0.1
1,594,852 - ABIE41_RS07770 0.49 -0.2
1,594,941 + ABIE41_RS07770 0.55 -1.1
1,594,941 + ABIE41_RS07770 0.55 +0.1
1,594,942 - ABIE41_RS07770 0.55 +0.1
1,594,942 - ABIE41_RS07770 0.55 -3.3
1,594,942 - ABIE41_RS07770 0.55 -0.0
1,595,115 + ABIE41_RS07770 0.67 -0.3
1,595,116 - ABIE41_RS07770 0.67 +0.5
1,595,116 - ABIE41_RS07770 0.67 +1.3
1,595,116 - ABIE41_RS07770 0.67 -0.4
1,595,116 - ABIE41_RS07770 0.67 +0.7
1,595,116 - ABIE41_RS07770 0.67 -0.3
1,595,172 + ABIE41_RS07770 0.71 -2.2
1,595,172 + ABIE41_RS07770 0.71 +2.1
1,595,172 + ABIE41_RS07770 0.71 -0.5
1,595,172 + ABIE41_RS07770 0.71 -1.0
1,595,172 + ABIE41_RS07770 0.71 +0.5
1,595,172 + ABIE41_RS07770 0.71 -0.5
1,595,172 + ABIE41_RS07770 0.71 -2.1
1,595,172 + ABIE41_RS07770 0.71 -2.2
1,595,172 + ABIE41_RS07770 0.71 +0.4
1,595,172 + ABIE41_RS07770 0.71 +0.9
1,595,172 + ABIE41_RS07770 0.71 -0.5
1,595,172 + ABIE41_RS07770 0.71 +1.6
1,595,172 + ABIE41_RS07770 0.71 -0.5
1,595,172 + ABIE41_RS07770 0.71 +0.9
1,595,173 - ABIE41_RS07770 0.71 +0.2
1,595,173 - ABIE41_RS07770 0.71 +0.3
1,595,173 - ABIE41_RS07770 0.71 -0.4
1,595,173 - ABIE41_RS07770 0.71 +0.2
1,595,173 - ABIE41_RS07770 0.71 +1.0
1,595,173 - ABIE41_RS07770 0.71 +0.1
1,595,173 - ABIE41_RS07770 0.71 -1.9
1,595,173 - ABIE41_RS07770 0.71 +0.1
1,595,173 - ABIE41_RS07770 0.71 -0.1
1,595,173 - ABIE41_RS07770 0.71 +0.6
1,595,181 + ABIE41_RS07770 0.71 +0.5
1,595,182 - ABIE41_RS07770 0.71 -0.1
1,595,349 + ABIE41_RS07770 0.82 -0.1
1,595,349 + ABIE41_RS07770 0.82 -0.7
1,595,349 + ABIE41_RS07770 0.82 -0.5
1,595,349 + ABIE41_RS07770 0.82 +0.0
1,595,350 - ABIE41_RS07770 0.82 +0.0
1,595,350 - ABIE41_RS07770 0.82 -0.0
1,595,350 - ABIE41_RS07770 0.82 -0.1
1,595,350 - ABIE41_RS07770 0.82 +0.5
1,595,350 - ABIE41_RS07770 0.82 -0.5
1,595,350 - ABIE41_RS07770 0.82 +0.8
1,595,350 - ABIE41_RS07770 0.82 -1.1
1,595,392 - ABIE41_RS07770 0.85 +1.1
1,595,967 - ABIE41_RS07775 0.43 -0.3
1,595,967 - ABIE41_RS07775 0.43 -0.2
1,596,293 + ABIE41_RS07775 0.87 +0.1
1,596,293 + ABIE41_RS07775 0.87 -0.6
1,596,293 + ABIE41_RS07775 0.87 -0.4
1,596,294 - ABIE41_RS07775 0.87 -0.3
1,596,294 - ABIE41_RS07775 0.87 +0.6
1,596,587 + +0.3
1,596,587 + -0.1
1,596,588 - -0.1
1,596,588 - +1.7
1,596,736 + +0.3
1,596,736 + -0.0
1,596,737 - +0.1
1,596,737 - -1.1
1,596,810 + ABIE41_RS07780 0.11 +0.0
1,596,810 + ABIE41_RS07780 0.11 +1.8
1,596,811 - ABIE41_RS07780 0.11 +3.7

Or see this region's nucleotide sequence