Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS03465 and ABIE41_RS03470 are separated by 111 nucleotides ABIE41_RS03470 and ABIE41_RS03475 are separated by 36 nucleotides ABIE41_RS03475 and ABIE41_RS03480 are separated by 152 nucleotides
ABIE41_RS03465: ABIE41_RS03465 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 720,400 to 721,479
_RS03465
ABIE41_RS03470: ABIE41_RS03470 - thioredoxin family protein, at 721,591 to 722,232
_RS03470
ABIE41_RS03475: ABIE41_RS03475 - protein-disulfide reductase DsbD domain-containing protein, at 722,269 to 724,425
_RS03475
ABIE41_RS03480: ABIE41_RS03480 - hypothetical protein, at 724,578 to 725,390
_RS03480
Position (kb) 722
723
724
725 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 721.625 kb on + strand at 721.625 kb on + strand at 721.625 kb on + strand at 721.626 kb on - strand at 721.626 kb on - strand at 721.626 kb on - strand at 721.665 kb on + strand, within ABIE41_RS03470 at 721.666 kb on - strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.691 kb on + strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.692 kb on - strand, within ABIE41_RS03470 at 721.752 kb on + strand, within ABIE41_RS03470 at 721.752 kb on + strand, within ABIE41_RS03470 at 721.752 kb on + strand, within ABIE41_RS03470 at 721.753 kb on - strand, within ABIE41_RS03470 at 721.754 kb on + strand, within ABIE41_RS03470 at 721.754 kb on + strand, within ABIE41_RS03470 at 721.755 kb on - strand, within ABIE41_RS03470 at 721.755 kb on - strand, within ABIE41_RS03470 at 721.755 kb on - strand, within ABIE41_RS03470 at 721.755 kb on - strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.784 kb on + strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 721.785 kb on - strand, within ABIE41_RS03470 at 722.003 kb on + strand, within ABIE41_RS03470 at 722.003 kb on + strand, within ABIE41_RS03470 at 722.003 kb on + strand, within ABIE41_RS03470 at 722.004 kb on - strand, within ABIE41_RS03470 at 722.004 kb on - strand, within ABIE41_RS03470 at 722.004 kb on - strand, within ABIE41_RS03470 at 722.018 kb on + strand, within ABIE41_RS03470 at 722.018 kb on + strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 722.019 kb on - strand, within ABIE41_RS03470 at 724.579 kb on + strand at 724.579 kb on + strand at 724.579 kb on + strand at 724.580 kb on - strand at 724.739 kb on - strand, within ABIE41_RS03480 at 724.739 kb on - strand, within ABIE41_RS03480 at 724.739 kb on - strand, within ABIE41_RS03480
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 721,625 + -1.6 721,625 + +2.1 721,625 + +0.2 721,626 - -0.8 721,626 - -2.3 721,626 - +0.7 721,665 + ABIE41_RS03470 0.12 +0.1 721,666 - ABIE41_RS03470 0.12 +0.6 721,691 + ABIE41_RS03470 0.16 -0.4 721,691 + ABIE41_RS03470 0.16 +0.6 721,691 + ABIE41_RS03470 0.16 +0.3 721,691 + ABIE41_RS03470 0.16 +0.1 721,691 + ABIE41_RS03470 0.16 +1.0 721,691 + ABIE41_RS03470 0.16 +0.4 721,691 + ABIE41_RS03470 0.16 +1.2 721,691 + ABIE41_RS03470 0.16 -2.5 721,691 + ABIE41_RS03470 0.16 +1.9 721,692 - ABIE41_RS03470 0.16 -0.6 721,692 - ABIE41_RS03470 0.16 -0.2 721,692 - ABIE41_RS03470 0.16 +1.6 721,692 - ABIE41_RS03470 0.16 +0.3 721,692 - ABIE41_RS03470 0.16 -1.2 721,692 - ABIE41_RS03470 0.16 -0.4 721,692 - ABIE41_RS03470 0.16 -2.2 721,752 + ABIE41_RS03470 0.25 +0.2 721,752 + ABIE41_RS03470 0.25 +0.9 721,752 + ABIE41_RS03470 0.25 +0.7 721,753 - ABIE41_RS03470 0.25 +0.8 721,754 + ABIE41_RS03470 0.25 -1.2 721,754 + ABIE41_RS03470 0.25 +0.7 721,755 - ABIE41_RS03470 0.26 +2.4 721,755 - ABIE41_RS03470 0.26 -2.4 721,755 - ABIE41_RS03470 0.26 +0.5 721,755 - ABIE41_RS03470 0.26 -4.1 721,784 + ABIE41_RS03470 0.30 -0.6 721,784 + ABIE41_RS03470 0.30 -1.3 721,784 + ABIE41_RS03470 0.30 -2.1 721,784 + ABIE41_RS03470 0.30 -3.4 721,784 + ABIE41_RS03470 0.30 -1.1 721,784 + ABIE41_RS03470 0.30 +0.5 721,784 + ABIE41_RS03470 0.30 +0.3 721,784 + ABIE41_RS03470 0.30 +0.5 721,784 + ABIE41_RS03470 0.30 +0.3 721,784 + ABIE41_RS03470 0.30 +0.0 721,784 + ABIE41_RS03470 0.30 -2.7 721,784 + ABIE41_RS03470 0.30 -0.2 721,785 - ABIE41_RS03470 0.30 -0.3 721,785 - ABIE41_RS03470 0.30 -0.9 721,785 - ABIE41_RS03470 0.30 +1.6 721,785 - ABIE41_RS03470 0.30 -0.1 721,785 - ABIE41_RS03470 0.30 +0.0 721,785 - ABIE41_RS03470 0.30 -0.5 721,785 - ABIE41_RS03470 0.30 -1.2 721,785 - ABIE41_RS03470 0.30 -3.5 722,003 + ABIE41_RS03470 0.64 +0.6 722,003 + ABIE41_RS03470 0.64 -0.2 722,003 + ABIE41_RS03470 0.64 -1.4 722,004 - ABIE41_RS03470 0.64 -0.2 722,004 - ABIE41_RS03470 0.64 -0.3 722,004 - ABIE41_RS03470 0.64 +0.4 722,018 + ABIE41_RS03470 0.67 -0.8 722,018 + ABIE41_RS03470 0.67 +0.2 722,019 - ABIE41_RS03470 0.67 -0.9 722,019 - ABIE41_RS03470 0.67 +1.0 722,019 - ABIE41_RS03470 0.67 +2.3 722,019 - ABIE41_RS03470 0.67 -0.0 722,019 - ABIE41_RS03470 0.67 -0.7 722,019 - ABIE41_RS03470 0.67 -0.1 722,019 - ABIE41_RS03470 0.67 +0.2 722,019 - ABIE41_RS03470 0.67 +0.3 724,579 + +0.4 724,579 + -1.9 724,579 + +0.7 724,580 - -0.4 724,739 - ABIE41_RS03480 0.20 +0.8 724,739 - ABIE41_RS03480 0.20 -0.8 724,739 - ABIE41_RS03480 0.20 -1.0
Or see this region's nucleotide sequence