Strain Fitness in Bosea sp. OAE506 around ABIE41_RS03170

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS03165 and ABIE41_RS03170 are separated by 94 nucleotidesABIE41_RS03170 and ABIE41_RS03175 are separated by 71 nucleotidesABIE41_RS03175 and ABIE41_RS03180 are separated by 77 nucleotides ABIE41_RS03165: ABIE41_RS03165 - TAXI family TRAP transporter solute-binding subunit, at 663,402 to 664,382 _RS03165 ABIE41_RS03170: ABIE41_RS03170 - TIGR00645 family protein, at 664,477 to 665,064 _RS03170 ABIE41_RS03175: ABIE41_RS03175 - peptide-methionine (S)-S-oxide reductase MsrA, at 665,136 to 665,795 _RS03175 ABIE41_RS03180: ABIE41_RS03180 - PetM family of cytochrome b6f complex subunit 7, at 665,873 to 666,193 _RS03180 Position (kb) 664 665 666Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 663.569 kb on - strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 664.025 kb on - strand, within ABIE41_RS03165at 664.025 kb on - strand, within ABIE41_RS03165at 664.090 kb on + strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.247 kb on - strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.446 kb on - strandat 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.599 kb on - strand, within ABIE41_RS03170at 664.599 kb on - strand, within ABIE41_RS03170at 664.765 kb on - strand, within ABIE41_RS03170at 664.781 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 665.233 kb on + strand, within ABIE41_RS03175at 665.234 kb on - strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.318 kb on - strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.464 kb on + strand, within ABIE41_RS03175at 665.465 kb on - strand, within ABIE41_RS03175at 665.465 kb on - strand, within ABIE41_RS03175at 665.465 kb on - strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.539 kb on + strand, within ABIE41_RS03175at 665.540 kb on - strand, within ABIE41_RS03175at 665.540 kb on - strand, within ABIE41_RS03175at 665.540 kb on - strand, within ABIE41_RS03175at 665.540 kb on - strand, within ABIE41_RS03175at 665.540 kb on - strand, within ABIE41_RS03175at 665.570 kb on - strand, within ABIE41_RS03175at 665.570 kb on - strand, within ABIE41_RS03175at 665.825 kb on + strandat 665.825 kb on + strandat 665.826 kb on - strandat 665.826 kb on - strandat 665.826 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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663,569 - ABIE41_RS03165 0.17 +0.8
663,649 + ABIE41_RS03165 0.25 +0.9
663,649 + ABIE41_RS03165 0.25 -0.7
663,649 + ABIE41_RS03165 0.25 -1.2
663,649 + ABIE41_RS03165 0.25 -0.1
663,649 + ABIE41_RS03165 0.25 +1.8
663,650 - ABIE41_RS03165 0.25 -0.2
663,650 - ABIE41_RS03165 0.25 -0.3
663,650 - ABIE41_RS03165 0.25 -0.3
663,650 - ABIE41_RS03165 0.25 -0.5
663,650 - ABIE41_RS03165 0.25 +0.5
663,650 - ABIE41_RS03165 0.25 +0.4
663,650 - ABIE41_RS03165 0.25 +0.1
663,650 - ABIE41_RS03165 0.25 +1.4
663,650 - ABIE41_RS03165 0.25 -0.2
663,650 - ABIE41_RS03165 0.25 +0.1
663,650 - ABIE41_RS03165 0.25 +0.1
663,650 - ABIE41_RS03165 0.25 +1.8
663,857 - ABIE41_RS03165 0.46 -0.7
663,857 - ABIE41_RS03165 0.46 -2.2
663,857 - ABIE41_RS03165 0.46 -0.1
663,857 - ABIE41_RS03165 0.46 -0.0
663,857 - ABIE41_RS03165 0.46 +0.4
664,025 - ABIE41_RS03165 0.64 +0.4
664,025 - ABIE41_RS03165 0.64 +0.7
664,090 + ABIE41_RS03165 0.70 +4.9
664,091 - ABIE41_RS03165 0.70 -0.3
664,091 - ABIE41_RS03165 0.70 -0.2
664,091 - ABIE41_RS03165 0.70 +0.2
664,091 - ABIE41_RS03165 0.70 -1.0
664,247 - ABIE41_RS03165 0.86 -1.2
664,249 + ABIE41_RS03165 0.86 +0.2
664,249 + ABIE41_RS03165 0.86 +0.4
664,249 + ABIE41_RS03165 0.86 +0.4
664,249 + ABIE41_RS03165 0.86 -2.2
664,249 + ABIE41_RS03165 0.86 +0.2
664,249 + ABIE41_RS03165 0.86 +1.1
664,249 + ABIE41_RS03165 0.86 -1.1
664,249 + ABIE41_RS03165 0.86 +0.2
664,249 + ABIE41_RS03165 0.86 +0.4
664,249 + ABIE41_RS03165 0.86 +0.3
664,250 - ABIE41_RS03165 0.86 -1.0
664,250 - ABIE41_RS03165 0.86 -1.4
664,250 - ABIE41_RS03165 0.86 -0.8
664,250 - ABIE41_RS03165 0.86 +0.0
664,250 - ABIE41_RS03165 0.86 -0.6
664,250 - ABIE41_RS03165 0.86 -0.3
664,250 - ABIE41_RS03165 0.86 -4.0
664,250 - ABIE41_RS03165 0.86 -1.0
664,250 - ABIE41_RS03165 0.86 -0.2
664,446 - +0.1
664,598 + ABIE41_RS03170 0.21 +1.6
664,598 + ABIE41_RS03170 0.21 +0.4
664,598 + ABIE41_RS03170 0.21 -3.3
664,598 + ABIE41_RS03170 0.21 -0.9
664,598 + ABIE41_RS03170 0.21 -0.7
664,598 + ABIE41_RS03170 0.21 -1.0
664,599 - ABIE41_RS03170 0.21 +1.2
664,599 - ABIE41_RS03170 0.21 +0.7
664,765 - ABIE41_RS03170 0.49 -0.6
664,781 + ABIE41_RS03170 0.52 -0.2
664,955 + ABIE41_RS03170 0.81 -0.3
664,955 + ABIE41_RS03170 0.81 +0.4
664,955 + ABIE41_RS03170 0.81 +0.1
664,955 + ABIE41_RS03170 0.81 +0.2
664,956 - ABIE41_RS03170 0.81 -2.1
664,956 - ABIE41_RS03170 0.81 -0.2
664,956 - ABIE41_RS03170 0.81 -2.2
664,956 - ABIE41_RS03170 0.81 +2.4
664,956 - ABIE41_RS03170 0.81 +0.4
664,956 - ABIE41_RS03170 0.81 -1.6
664,956 - ABIE41_RS03170 0.81 -1.5
665,233 + ABIE41_RS03175 0.15 +1.5
665,234 - ABIE41_RS03175 0.15 +0.1
665,248 + ABIE41_RS03175 0.17 +0.3
665,248 + ABIE41_RS03175 0.17 -2.0
665,248 + ABIE41_RS03175 0.17 +1.2
665,248 + ABIE41_RS03175 0.17 +1.4
665,249 - ABIE41_RS03175 0.17 +0.5
665,249 - ABIE41_RS03175 0.17 -0.5
665,249 - ABIE41_RS03175 0.17 +0.7
665,249 - ABIE41_RS03175 0.17 +0.0
665,282 + ABIE41_RS03175 0.22 +0.1
665,282 + ABIE41_RS03175 0.22 -0.5
665,282 + ABIE41_RS03175 0.22 +1.0
665,282 + ABIE41_RS03175 0.22 +0.2
665,282 + ABIE41_RS03175 0.22 -0.1
665,283 - ABIE41_RS03175 0.22 -0.4
665,283 - ABIE41_RS03175 0.22 +0.4
665,283 - ABIE41_RS03175 0.22 -0.6
665,283 - ABIE41_RS03175 0.22 -1.5
665,318 - ABIE41_RS03175 0.28 -1.5
665,368 + ABIE41_RS03175 0.35 +1.4
665,368 + ABIE41_RS03175 0.35 -0.0
665,368 + ABIE41_RS03175 0.35 -0.1
665,368 + ABIE41_RS03175 0.35 -0.9
665,368 + ABIE41_RS03175 0.35 -0.2
665,368 + ABIE41_RS03175 0.35 +1.0
665,368 + ABIE41_RS03175 0.35 -1.5
665,369 - ABIE41_RS03175 0.35 -0.8
665,369 - ABIE41_RS03175 0.35 +0.4
665,369 - ABIE41_RS03175 0.35 +0.6
665,369 - ABIE41_RS03175 0.35 +0.5
665,369 - ABIE41_RS03175 0.35 -1.0
665,369 - ABIE41_RS03175 0.35 +3.7
665,369 - ABIE41_RS03175 0.35 +0.8
665,369 - ABIE41_RS03175 0.35 -0.2
665,464 + ABIE41_RS03175 0.50 -3.5
665,465 - ABIE41_RS03175 0.50 +0.9
665,465 - ABIE41_RS03175 0.50 +0.5
665,465 - ABIE41_RS03175 0.50 +0.1
665,539 + ABIE41_RS03175 0.61 +1.4
665,539 + ABIE41_RS03175 0.61 -1.1
665,539 + ABIE41_RS03175 0.61 -0.3
665,539 + ABIE41_RS03175 0.61 +0.2
665,539 + ABIE41_RS03175 0.61 +0.3
665,539 + ABIE41_RS03175 0.61 +0.9
665,539 + ABIE41_RS03175 0.61 -3.2
665,540 - ABIE41_RS03175 0.61 -0.1
665,540 - ABIE41_RS03175 0.61 +0.5
665,540 - ABIE41_RS03175 0.61 +0.8
665,540 - ABIE41_RS03175 0.61 +0.4
665,540 - ABIE41_RS03175 0.61 +0.1
665,570 - ABIE41_RS03175 0.66 +0.3
665,570 - ABIE41_RS03175 0.66 -0.3
665,825 + +2.5
665,825 + -1.0
665,826 - +1.2
665,826 - -3.1
665,826 - -0.2

Or see this region's nucleotide sequence