Strain Fitness in Bosea sp. OAE506 around ABIE41_RS03165

Experiment: L-Proline (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS03160 and ABIE41_RS03165 are separated by 178 nucleotidesABIE41_RS03165 and ABIE41_RS03170 are separated by 94 nucleotidesABIE41_RS03170 and ABIE41_RS03175 are separated by 71 nucleotides ABIE41_RS03160: ABIE41_RS03160 - TRAP transporter permease, at 661,058 to 663,223 _RS03160 ABIE41_RS03165: ABIE41_RS03165 - TAXI family TRAP transporter solute-binding subunit, at 663,402 to 664,382 _RS03165 ABIE41_RS03170: ABIE41_RS03170 - TIGR00645 family protein, at 664,477 to 665,064 _RS03170 ABIE41_RS03175: ABIE41_RS03175 - peptide-methionine (S)-S-oxide reductase MsrA, at 665,136 to 665,795 _RS03175 Position (kb) 663 664 665Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 662.509 kb on - strand, within ABIE41_RS03160at 662.601 kb on + strand, within ABIE41_RS03160at 662.601 kb on + strand, within ABIE41_RS03160at 662.601 kb on + strand, within ABIE41_RS03160at 662.602 kb on - strand, within ABIE41_RS03160at 662.602 kb on - strand, within ABIE41_RS03160at 662.602 kb on - strand, within ABIE41_RS03160at 662.602 kb on - strand, within ABIE41_RS03160at 662.631 kb on + strand, within ABIE41_RS03160at 662.631 kb on + strand, within ABIE41_RS03160at 662.631 kb on + strand, within ABIE41_RS03160at 662.632 kb on - strand, within ABIE41_RS03160at 662.632 kb on - strand, within ABIE41_RS03160at 662.632 kb on - strand, within ABIE41_RS03160at 662.652 kb on + strand, within ABIE41_RS03160at 662.652 kb on + strand, within ABIE41_RS03160at 662.652 kb on + strand, within ABIE41_RS03160at 662.653 kb on - strand, within ABIE41_RS03160at 662.653 kb on - strand, within ABIE41_RS03160at 662.653 kb on - strand, within ABIE41_RS03160at 662.653 kb on - strand, within ABIE41_RS03160at 662.653 kb on - strand, within ABIE41_RS03160at 662.653 kb on - strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.730 kb on + strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.731 kb on - strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.886 kb on + strand, within ABIE41_RS03160at 662.887 kb on - strand, within ABIE41_RS03160at 662.887 kb on - strand, within ABIE41_RS03160at 662.887 kb on - strand, within ABIE41_RS03160at 662.887 kb on - strand, within ABIE41_RS03160at 662.887 kb on - strand, within ABIE41_RS03160at 662.928 kb on + strand, within ABIE41_RS03160at 662.928 kb on + strand, within ABIE41_RS03160at 662.929 kb on - strand, within ABIE41_RS03160at 662.929 kb on - strand, within ABIE41_RS03160at 662.929 kb on - strand, within ABIE41_RS03160at 662.929 kb on - strand, within ABIE41_RS03160at 662.967 kb on + strand, within ABIE41_RS03160at 663.084 kb on + strandat 663.084 kb on + strandat 663.084 kb on + strandat 663.085 kb on - strandat 663.087 kb on + strandat 663.087 kb on + strandat 663.087 kb on + strandat 663.088 kb on - strandat 663.088 kb on - strandat 663.088 kb on - strandat 663.402 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.403 kb on + strandat 663.404 kb on - strandat 663.404 kb on - strandat 663.404 kb on - strandat 663.404 kb on - strandat 663.404 kb on - strandat 663.427 kb on + strandat 663.428 kb on - strandat 663.569 kb on - strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.649 kb on + strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.650 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 663.857 kb on - strand, within ABIE41_RS03165at 664.025 kb on - strand, within ABIE41_RS03165at 664.025 kb on - strand, within ABIE41_RS03165at 664.090 kb on + strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.091 kb on - strand, within ABIE41_RS03165at 664.247 kb on - strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.249 kb on + strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.250 kb on - strand, within ABIE41_RS03165at 664.446 kb on - strandat 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.598 kb on + strand, within ABIE41_RS03170at 664.599 kb on - strand, within ABIE41_RS03170at 664.599 kb on - strand, within ABIE41_RS03170at 664.765 kb on - strand, within ABIE41_RS03170at 664.781 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.955 kb on + strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 664.956 kb on - strand, within ABIE41_RS03170at 665.233 kb on + strand, within ABIE41_RS03175at 665.234 kb on - strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.248 kb on + strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.249 kb on - strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.282 kb on + strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.283 kb on - strand, within ABIE41_RS03175at 665.318 kb on - strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.368 kb on + strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175at 665.369 kb on - strand, within ABIE41_RS03175

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (C)
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662,509 - ABIE41_RS03160 0.67 +2.4
662,601 + ABIE41_RS03160 0.71 +0.0
662,601 + ABIE41_RS03160 0.71 -0.6
662,601 + ABIE41_RS03160 0.71 -1.8
662,602 - ABIE41_RS03160 0.71 -1.5
662,602 - ABIE41_RS03160 0.71 -1.0
662,602 - ABIE41_RS03160 0.71 +1.0
662,602 - ABIE41_RS03160 0.71 +0.4
662,631 + ABIE41_RS03160 0.73 +0.1
662,631 + ABIE41_RS03160 0.73 -1.2
662,631 + ABIE41_RS03160 0.73 -0.7
662,632 - ABIE41_RS03160 0.73 -1.0
662,632 - ABIE41_RS03160 0.73 +0.1
662,632 - ABIE41_RS03160 0.73 +2.2
662,652 + ABIE41_RS03160 0.74 +1.1
662,652 + ABIE41_RS03160 0.74 -1.4
662,652 + ABIE41_RS03160 0.74 -0.0
662,653 - ABIE41_RS03160 0.74 +0.9
662,653 - ABIE41_RS03160 0.74 +1.5
662,653 - ABIE41_RS03160 0.74 -1.0
662,653 - ABIE41_RS03160 0.74 -0.6
662,653 - ABIE41_RS03160 0.74 -2.9
662,653 - ABIE41_RS03160 0.74 -1.3
662,730 + ABIE41_RS03160 0.77 -0.9
662,730 + ABIE41_RS03160 0.77 -1.0
662,730 + ABIE41_RS03160 0.77 +0.2
662,730 + ABIE41_RS03160 0.77 +0.1
662,730 + ABIE41_RS03160 0.77 -0.5
662,730 + ABIE41_RS03160 0.77 +0.5
662,730 + ABIE41_RS03160 0.77 -0.4
662,730 + ABIE41_RS03160 0.77 -0.0
662,730 + ABIE41_RS03160 0.77 -1.0
662,731 - ABIE41_RS03160 0.77 -1.6
662,731 - ABIE41_RS03160 0.77 +0.5
662,731 - ABIE41_RS03160 0.77 +0.2
662,731 - ABIE41_RS03160 0.77 +0.0
662,731 - ABIE41_RS03160 0.77 -0.0
662,731 - ABIE41_RS03160 0.77 +0.8
662,731 - ABIE41_RS03160 0.77 +0.6
662,886 + ABIE41_RS03160 0.84 +0.6
662,886 + ABIE41_RS03160 0.84 +1.2
662,886 + ABIE41_RS03160 0.84 +0.9
662,886 + ABIE41_RS03160 0.84 -0.2
662,886 + ABIE41_RS03160 0.84 -1.6
662,886 + ABIE41_RS03160 0.84 +0.9
662,886 + ABIE41_RS03160 0.84 +0.3
662,886 + ABIE41_RS03160 0.84 -0.3
662,886 + ABIE41_RS03160 0.84 -2.6
662,887 - ABIE41_RS03160 0.84 +0.2
662,887 - ABIE41_RS03160 0.84 +0.8
662,887 - ABIE41_RS03160 0.84 +1.2
662,887 - ABIE41_RS03160 0.84 -2.0
662,887 - ABIE41_RS03160 0.84 +0.5
662,928 + ABIE41_RS03160 0.86 +1.4
662,928 + ABIE41_RS03160 0.86 +0.2
662,929 - ABIE41_RS03160 0.86 -0.4
662,929 - ABIE41_RS03160 0.86 +1.4
662,929 - ABIE41_RS03160 0.86 +0.0
662,929 - ABIE41_RS03160 0.86 +2.2
662,967 + ABIE41_RS03160 0.88 +1.6
663,084 + -0.2
663,084 + +0.9
663,084 + +0.3
663,085 - -0.3
663,087 + +0.3
663,087 + +0.0
663,087 + +0.6
663,088 - +0.6
663,088 - +0.4
663,088 - +1.2
663,402 + +1.4
663,403 + -0.1
663,403 + -1.5
663,403 + +0.5
663,403 + +0.3
663,403 + -0.1
663,403 + +0.7
663,403 + +0.0
663,403 + +0.0
663,403 + +0.6
663,404 - +0.3
663,404 - -0.1
663,404 - -0.8
663,404 - -0.6
663,404 - -0.5
663,427 + -0.7
663,428 - +1.5
663,569 - ABIE41_RS03165 0.17 +0.8
663,649 + ABIE41_RS03165 0.25 +0.9
663,649 + ABIE41_RS03165 0.25 -0.7
663,649 + ABIE41_RS03165 0.25 -1.2
663,649 + ABIE41_RS03165 0.25 -0.1
663,649 + ABIE41_RS03165 0.25 +1.8
663,650 - ABIE41_RS03165 0.25 -0.2
663,650 - ABIE41_RS03165 0.25 -0.3
663,650 - ABIE41_RS03165 0.25 -0.3
663,650 - ABIE41_RS03165 0.25 -0.5
663,650 - ABIE41_RS03165 0.25 +0.5
663,650 - ABIE41_RS03165 0.25 +0.4
663,650 - ABIE41_RS03165 0.25 +0.1
663,650 - ABIE41_RS03165 0.25 +1.4
663,650 - ABIE41_RS03165 0.25 -0.2
663,650 - ABIE41_RS03165 0.25 +0.1
663,650 - ABIE41_RS03165 0.25 +0.1
663,650 - ABIE41_RS03165 0.25 +1.8
663,857 - ABIE41_RS03165 0.46 -0.7
663,857 - ABIE41_RS03165 0.46 -2.2
663,857 - ABIE41_RS03165 0.46 -0.1
663,857 - ABIE41_RS03165 0.46 -0.0
663,857 - ABIE41_RS03165 0.46 +0.4
664,025 - ABIE41_RS03165 0.64 +0.4
664,025 - ABIE41_RS03165 0.64 +0.7
664,090 + ABIE41_RS03165 0.70 +4.9
664,091 - ABIE41_RS03165 0.70 -0.3
664,091 - ABIE41_RS03165 0.70 -0.2
664,091 - ABIE41_RS03165 0.70 +0.2
664,091 - ABIE41_RS03165 0.70 -1.0
664,247 - ABIE41_RS03165 0.86 -1.2
664,249 + ABIE41_RS03165 0.86 +0.2
664,249 + ABIE41_RS03165 0.86 +0.4
664,249 + ABIE41_RS03165 0.86 +0.4
664,249 + ABIE41_RS03165 0.86 -2.2
664,249 + ABIE41_RS03165 0.86 +0.2
664,249 + ABIE41_RS03165 0.86 +1.1
664,249 + ABIE41_RS03165 0.86 -1.1
664,249 + ABIE41_RS03165 0.86 +0.2
664,249 + ABIE41_RS03165 0.86 +0.4
664,249 + ABIE41_RS03165 0.86 +0.3
664,250 - ABIE41_RS03165 0.86 -1.0
664,250 - ABIE41_RS03165 0.86 -1.4
664,250 - ABIE41_RS03165 0.86 -0.8
664,250 - ABIE41_RS03165 0.86 +0.0
664,250 - ABIE41_RS03165 0.86 -0.6
664,250 - ABIE41_RS03165 0.86 -0.3
664,250 - ABIE41_RS03165 0.86 -4.0
664,250 - ABIE41_RS03165 0.86 -1.0
664,250 - ABIE41_RS03165 0.86 -0.2
664,446 - +0.1
664,598 + ABIE41_RS03170 0.21 +1.6
664,598 + ABIE41_RS03170 0.21 +0.4
664,598 + ABIE41_RS03170 0.21 -3.3
664,598 + ABIE41_RS03170 0.21 -0.9
664,598 + ABIE41_RS03170 0.21 -0.7
664,598 + ABIE41_RS03170 0.21 -1.0
664,599 - ABIE41_RS03170 0.21 +1.2
664,599 - ABIE41_RS03170 0.21 +0.7
664,765 - ABIE41_RS03170 0.49 -0.6
664,781 + ABIE41_RS03170 0.52 -0.2
664,955 + ABIE41_RS03170 0.81 -0.3
664,955 + ABIE41_RS03170 0.81 +0.4
664,955 + ABIE41_RS03170 0.81 +0.1
664,955 + ABIE41_RS03170 0.81 +0.2
664,956 - ABIE41_RS03170 0.81 -2.1
664,956 - ABIE41_RS03170 0.81 -0.2
664,956 - ABIE41_RS03170 0.81 -2.2
664,956 - ABIE41_RS03170 0.81 +2.4
664,956 - ABIE41_RS03170 0.81 +0.4
664,956 - ABIE41_RS03170 0.81 -1.6
664,956 - ABIE41_RS03170 0.81 -1.5
665,233 + ABIE41_RS03175 0.15 +1.5
665,234 - ABIE41_RS03175 0.15 +0.1
665,248 + ABIE41_RS03175 0.17 +0.3
665,248 + ABIE41_RS03175 0.17 -2.0
665,248 + ABIE41_RS03175 0.17 +1.2
665,248 + ABIE41_RS03175 0.17 +1.4
665,249 - ABIE41_RS03175 0.17 +0.5
665,249 - ABIE41_RS03175 0.17 -0.5
665,249 - ABIE41_RS03175 0.17 +0.7
665,249 - ABIE41_RS03175 0.17 +0.0
665,282 + ABIE41_RS03175 0.22 +0.1
665,282 + ABIE41_RS03175 0.22 -0.5
665,282 + ABIE41_RS03175 0.22 +1.0
665,282 + ABIE41_RS03175 0.22 +0.2
665,282 + ABIE41_RS03175 0.22 -0.1
665,283 - ABIE41_RS03175 0.22 -0.4
665,283 - ABIE41_RS03175 0.22 +0.4
665,283 - ABIE41_RS03175 0.22 -0.6
665,283 - ABIE41_RS03175 0.22 -1.5
665,318 - ABIE41_RS03175 0.28 -1.5
665,368 + ABIE41_RS03175 0.35 +1.4
665,368 + ABIE41_RS03175 0.35 -0.0
665,368 + ABIE41_RS03175 0.35 -0.1
665,368 + ABIE41_RS03175 0.35 -0.9
665,368 + ABIE41_RS03175 0.35 -0.2
665,368 + ABIE41_RS03175 0.35 +1.0
665,368 + ABIE41_RS03175 0.35 -1.5
665,369 - ABIE41_RS03175 0.35 -0.8
665,369 - ABIE41_RS03175 0.35 +0.4
665,369 - ABIE41_RS03175 0.35 +0.6
665,369 - ABIE41_RS03175 0.35 +0.5
665,369 - ABIE41_RS03175 0.35 -1.0
665,369 - ABIE41_RS03175 0.35 +3.7
665,369 - ABIE41_RS03175 0.35 +0.8
665,369 - ABIE41_RS03175 0.35 -0.2

Or see this region's nucleotide sequence