Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE40_RS03675 and ABIE40_RS03680 are separated by 64 nucleotides ABIE40_RS03680 and ABIE40_RS03685 are separated by 140 nucleotides ABIE40_RS03685 and ABIE40_RS03690 are separated by 334 nucleotides
ABIE40_RS03675: ABIE40_RS03675 - glutathione binding-like protein, at 725,685 to 726,395
_RS03675
ABIE40_RS03680: ABIE40_RS03680 - hypothetical protein, at 726,460 to 726,906
_RS03680
ABIE40_RS03685: ABIE40_RS03685 - hypothetical protein, at 727,047 to 727,229
_RS03685
ABIE40_RS03690: ABIE40_RS03690 - chaperonin GroEL, at 727,564 to 729,204
_RS03690
Position (kb) 727
728 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 726.093 kb on + strand, within ABIE40_RS03675 at 726.094 kb on - strand, within ABIE40_RS03675 at 726.094 kb on - strand, within ABIE40_RS03675 at 726.094 kb on - strand, within ABIE40_RS03675 at 726.094 kb on - strand, within ABIE40_RS03675 at 726.094 kb on - strand, within ABIE40_RS03675 at 726.130 kb on - strand, within ABIE40_RS03675 at 726.130 kb on - strand, within ABIE40_RS03675 at 726.130 kb on - strand, within ABIE40_RS03675 at 726.145 kb on - strand, within ABIE40_RS03675 at 726.222 kb on + strand, within ABIE40_RS03675 at 726.222 kb on + strand, within ABIE40_RS03675 at 726.222 kb on + strand, within ABIE40_RS03675 at 726.222 kb on + strand, within ABIE40_RS03675 at 726.222 kb on + strand, within ABIE40_RS03675 at 726.222 kb on + strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.223 kb on - strand, within ABIE40_RS03675 at 726.276 kb on + strand, within ABIE40_RS03675 at 726.276 kb on + strand, within ABIE40_RS03675 at 726.277 kb on + strand, within ABIE40_RS03675 at 726.393 kb on + strand at 726.394 kb on - strand at 726.462 kb on - strand at 726.462 kb on - strand at 726.462 kb on - strand at 726.539 kb on + strand, within ABIE40_RS03680 at 726.539 kb on + strand, within ABIE40_RS03680 at 726.539 kb on + strand, within ABIE40_RS03680 at 726.539 kb on + strand, within ABIE40_RS03680 at 726.540 kb on - strand, within ABIE40_RS03680 at 726.669 kb on + strand, within ABIE40_RS03680 at 726.670 kb on - strand, within ABIE40_RS03680 at 726.692 kb on + strand, within ABIE40_RS03680 at 726.693 kb on - strand, within ABIE40_RS03680 at 726.693 kb on - strand, within ABIE40_RS03680 at 726.867 kb on + strand at 726.868 kb on - strand at 726.868 kb on - strand at 726.868 kb on - strand at 726.868 kb on - strand at 726.868 kb on - strand at 726.868 kb on - strand at 726.935 kb on + strand at 726.935 kb on + strand at 726.935 kb on + strand at 726.936 kb on - strand at 726.936 kb on - strand at 726.936 kb on - strand at 726.936 kb on - strand at 727.008 kb on + strand at 727.009 kb on - strand at 727.043 kb on + strand at 727.043 kb on + strand at 727.044 kb on - strand at 727.044 kb on - strand at 727.044 kb on - strand at 727.094 kb on + strand, within ABIE40_RS03685 at 727.094 kb on + strand, within ABIE40_RS03685 at 727.156 kb on - strand, within ABIE40_RS03685 at 727.220 kb on + strand at 727.220 kb on + strand at 727.220 kb on + strand at 727.221 kb on - strand at 727.222 kb on + strand at 727.223 kb on - strand at 727.377 kb on + strand at 727.378 kb on - strand at 727.404 kb on - strand at 727.419 kb on - strand at 727.435 kb on + strand at 727.469 kb on - strand at 727.563 kb on - strand at 727.563 kb on - strand at 727.563 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 726,093 + ABIE40_RS03675 0.57 +0.5 726,094 - ABIE40_RS03675 0.58 -1.9 726,094 - ABIE40_RS03675 0.58 +0.6 726,094 - ABIE40_RS03675 0.58 +0.4 726,094 - ABIE40_RS03675 0.58 +0.7 726,094 - ABIE40_RS03675 0.58 +0.0 726,130 - ABIE40_RS03675 0.63 -0.7 726,130 - ABIE40_RS03675 0.63 -0.6 726,130 - ABIE40_RS03675 0.63 -0.8 726,145 - ABIE40_RS03675 0.65 +1.0 726,222 + ABIE40_RS03675 0.76 -0.4 726,222 + ABIE40_RS03675 0.76 +0.7 726,222 + ABIE40_RS03675 0.76 +0.1 726,222 + ABIE40_RS03675 0.76 +0.3 726,222 + ABIE40_RS03675 0.76 +0.1 726,222 + ABIE40_RS03675 0.76 -1.2 726,223 - ABIE40_RS03675 0.76 -1.0 726,223 - ABIE40_RS03675 0.76 +0.6 726,223 - ABIE40_RS03675 0.76 +0.4 726,223 - ABIE40_RS03675 0.76 +1.4 726,223 - ABIE40_RS03675 0.76 -2.5 726,223 - ABIE40_RS03675 0.76 +1.3 726,223 - ABIE40_RS03675 0.76 +1.1 726,276 + ABIE40_RS03675 0.83 -0.7 726,276 + ABIE40_RS03675 0.83 -1.6 726,277 + ABIE40_RS03675 0.83 -2.7 726,393 + -0.5 726,394 - +0.2 726,462 - -0.6 726,462 - -0.0 726,462 - -1.0 726,539 + ABIE40_RS03680 0.18 +0.6 726,539 + ABIE40_RS03680 0.18 -0.0 726,539 + ABIE40_RS03680 0.18 -0.5 726,539 + ABIE40_RS03680 0.18 -2.9 726,540 - ABIE40_RS03680 0.18 -0.8 726,669 + ABIE40_RS03680 0.47 -1.0 726,670 - ABIE40_RS03680 0.47 +3.4 726,692 + ABIE40_RS03680 0.52 +0.5 726,693 - ABIE40_RS03680 0.52 -0.9 726,693 - ABIE40_RS03680 0.52 -0.0 726,867 + -0.7 726,868 - -1.6 726,868 - +0.5 726,868 - -1.2 726,868 - -0.5 726,868 - -0.5 726,868 - +1.3 726,935 + +0.1 726,935 + -2.9 726,935 + +0.4 726,936 - -0.0 726,936 - +2.1 726,936 - +0.9 726,936 - +1.4 727,008 + -0.6 727,009 - -0.1 727,043 + -0.0 727,043 + -0.4 727,044 - +0.2 727,044 - +0.4 727,044 - -2.0 727,094 + ABIE40_RS03685 0.26 -1.1 727,094 + ABIE40_RS03685 0.26 +1.6 727,156 - ABIE40_RS03685 0.60 -0.4 727,220 + +2.0 727,220 + +2.9 727,220 + -1.5 727,221 - +1.0 727,222 + -2.3 727,223 - -0.4 727,377 + -1.0 727,378 - -1.5 727,404 - +0.0 727,419 - -2.5 727,435 + +0.2 727,469 - +0.3 727,563 - +0.6 727,563 - +1.1 727,563 - +0.6
Or see this region's nucleotide sequence