Experiment: L-Proline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS02470 and ABID97_RS02475 are separated by 55 nucleotides ABID97_RS02475 and ABID97_RS02480 are separated by 281 nucleotides ABID97_RS02480 and ABID97_RS02485 are separated by 138 nucleotides
ABID97_RS02470: ABID97_RS02470 - penicillin-binding protein 1C, at 495,970 to 498,273
_RS02470
ABID97_RS02475: ABID97_RS02475 - alpha-2-macroglobulin, at 498,329 to 504,334
_RS02475
ABID97_RS02480: ABID97_RS02480 - SRPBCC family protein, at 504,616 to 505,122
_RS02480
ABID97_RS02485: ABID97_RS02485 - FAD-dependent oxidoreductase, at 505,261 to 506,874
_RS02485
Position (kb) 498
499
500
501
502
503
504
505 Strain fitness (log2 ratio) -1
0
1
2 at 497.417 kb on + strand, within ABID97_RS02470 at 497.418 kb on - strand, within ABID97_RS02470 at 497.757 kb on - strand, within ABID97_RS02470 at 497.757 kb on - strand, within ABID97_RS02470 at 497.816 kb on + strand, within ABID97_RS02470 at 497.817 kb on - strand, within ABID97_RS02470 at 497.916 kb on - strand, within ABID97_RS02470 at 498.047 kb on + strand at 498.047 kb on + strand at 498.048 kb on - strand at 498.158 kb on + strand at 498.450 kb on + strand at 498.451 kb on - strand at 498.487 kb on - strand at 498.487 kb on - strand at 498.520 kb on - strand at 498.520 kb on - strand at 498.832 kb on - strand at 498.832 kb on - strand at 498.835 kb on - strand at 499.005 kb on + strand, within ABID97_RS02475 at 499.173 kb on + strand, within ABID97_RS02475 at 499.173 kb on + strand, within ABID97_RS02475 at 499.174 kb on - strand, within ABID97_RS02475 at 499.299 kb on + strand, within ABID97_RS02475 at 499.408 kb on - strand, within ABID97_RS02475 at 499.801 kb on - strand, within ABID97_RS02475 at 500.370 kb on + strand, within ABID97_RS02475 at 500.370 kb on + strand, within ABID97_RS02475 at 500.370 kb on + strand, within ABID97_RS02475 at 500.608 kb on - strand, within ABID97_RS02475 at 500.796 kb on + strand, within ABID97_RS02475 at 500.796 kb on + strand, within ABID97_RS02475 at 500.796 kb on + strand, within ABID97_RS02475 at 500.797 kb on - strand, within ABID97_RS02475 at 500.797 kb on - strand, within ABID97_RS02475 at 500.841 kb on + strand, within ABID97_RS02475 at 500.842 kb on - strand, within ABID97_RS02475 at 500.923 kb on - strand, within ABID97_RS02475 at 501.007 kb on - strand, within ABID97_RS02475 at 501.087 kb on + strand, within ABID97_RS02475 at 501.087 kb on + strand, within ABID97_RS02475 at 501.384 kb on + strand, within ABID97_RS02475 at 501.385 kb on - strand, within ABID97_RS02475 at 501.385 kb on - strand, within ABID97_RS02475 at 501.510 kb on + strand, within ABID97_RS02475 at 501.633 kb on + strand, within ABID97_RS02475 at 501.899 kb on + strand, within ABID97_RS02475 at 501.899 kb on + strand, within ABID97_RS02475 at 501.899 kb on + strand, within ABID97_RS02475 at 501.903 kb on + strand, within ABID97_RS02475 at 501.904 kb on - strand, within ABID97_RS02475 at 501.904 kb on - strand, within ABID97_RS02475 at 501.918 kb on + strand, within ABID97_RS02475 at 501.919 kb on - strand, within ABID97_RS02475 at 501.919 kb on - strand, within ABID97_RS02475 at 501.956 kb on + strand, within ABID97_RS02475 at 501.957 kb on - strand, within ABID97_RS02475 at 502.116 kb on + strand, within ABID97_RS02475 at 502.116 kb on + strand, within ABID97_RS02475 at 502.117 kb on - strand, within ABID97_RS02475 at 502.136 kb on + strand, within ABID97_RS02475 at 502.136 kb on + strand, within ABID97_RS02475 at 502.136 kb on + strand, within ABID97_RS02475 at 502.137 kb on - strand, within ABID97_RS02475 at 502.137 kb on - strand, within ABID97_RS02475 at 502.140 kb on + strand, within ABID97_RS02475 at 502.140 kb on + strand, within ABID97_RS02475 at 502.140 kb on + strand, within ABID97_RS02475 at 502.141 kb on - strand, within ABID97_RS02475 at 502.141 kb on - strand, within ABID97_RS02475 at 502.141 kb on - strand, within ABID97_RS02475 at 502.294 kb on - strand, within ABID97_RS02475 at 503.055 kb on + strand, within ABID97_RS02475 at 503.055 kb on + strand, within ABID97_RS02475 at 503.056 kb on - strand, within ABID97_RS02475 at 503.605 kb on - strand, within ABID97_RS02475 at 503.757 kb on + strand at 503.757 kb on + strand at 503.757 kb on + strand at 503.758 kb on - strand at 503.817 kb on + strand at 503.817 kb on + strand at 503.817 kb on + strand at 503.817 kb on + strand at 503.817 kb on + strand at 503.818 kb on - strand at 503.818 kb on - strand at 504.447 kb on + strand at 504.596 kb on + strand at 504.788 kb on + strand, within ABID97_RS02480 at 504.788 kb on + strand, within ABID97_RS02480 at 504.789 kb on - strand, within ABID97_RS02480 at 504.789 kb on - strand, within ABID97_RS02480 at 504.789 kb on - strand, within ABID97_RS02480 at 504.794 kb on + strand, within ABID97_RS02480 at 504.794 kb on + strand, within ABID97_RS02480 at 504.795 kb on - strand, within ABID97_RS02480 at 504.795 kb on - strand, within ABID97_RS02480 at 504.795 kb on - strand, within ABID97_RS02480 at 505.056 kb on - strand, within ABID97_RS02480
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (C) remove 497,417 + ABID97_RS02470 0.63 -0.1 497,418 - ABID97_RS02470 0.63 -0.2 497,757 - ABID97_RS02470 0.78 +0.3 497,757 - ABID97_RS02470 0.78 -0.2 497,816 + ABID97_RS02470 0.80 -0.0 497,817 - ABID97_RS02470 0.80 -0.1 497,916 - ABID97_RS02470 0.84 -0.1 498,047 + +0.5 498,047 + -0.6 498,048 - -1.5 498,158 + +0.2 498,450 + +0.0 498,451 - +0.0 498,487 - +0.2 498,487 - +0.3 498,520 - +1.8 498,520 - +0.2 498,832 - +0.1 498,832 - +0.2 498,835 - +0.3 499,005 + ABID97_RS02475 0.11 -0.9 499,173 + ABID97_RS02475 0.14 +0.0 499,173 + ABID97_RS02475 0.14 +0.2 499,174 - ABID97_RS02475 0.14 -0.9 499,299 + ABID97_RS02475 0.16 +0.4 499,408 - ABID97_RS02475 0.18 +0.1 499,801 - ABID97_RS02475 0.25 -0.4 500,370 + ABID97_RS02475 0.34 +0.1 500,370 + ABID97_RS02475 0.34 -0.0 500,370 + ABID97_RS02475 0.34 +0.8 500,608 - ABID97_RS02475 0.38 +0.2 500,796 + ABID97_RS02475 0.41 +0.4 500,796 + ABID97_RS02475 0.41 -0.1 500,796 + ABID97_RS02475 0.41 +0.1 500,797 - ABID97_RS02475 0.41 +0.0 500,797 - ABID97_RS02475 0.41 +0.3 500,841 + ABID97_RS02475 0.42 -0.9 500,842 - ABID97_RS02475 0.42 +0.1 500,923 - ABID97_RS02475 0.43 +0.8 501,007 - ABID97_RS02475 0.45 +0.0 501,087 + ABID97_RS02475 0.46 +1.8 501,087 + ABID97_RS02475 0.46 +0.2 501,384 + ABID97_RS02475 0.51 -0.1 501,385 - ABID97_RS02475 0.51 +0.5 501,385 - ABID97_RS02475 0.51 +1.0 501,510 + ABID97_RS02475 0.53 -0.1 501,633 + ABID97_RS02475 0.55 +0.0 501,899 + ABID97_RS02475 0.59 -0.2 501,899 + ABID97_RS02475 0.59 +0.2 501,899 + ABID97_RS02475 0.59 +0.1 501,903 + ABID97_RS02475 0.60 +0.5 501,904 - ABID97_RS02475 0.60 +0.3 501,904 - ABID97_RS02475 0.60 +0.8 501,918 + ABID97_RS02475 0.60 +0.2 501,919 - ABID97_RS02475 0.60 +0.3 501,919 - ABID97_RS02475 0.60 +0.1 501,956 + ABID97_RS02475 0.60 -0.0 501,957 - ABID97_RS02475 0.60 -0.3 502,116 + ABID97_RS02475 0.63 +0.0 502,116 + ABID97_RS02475 0.63 +0.2 502,117 - ABID97_RS02475 0.63 +0.1 502,136 + ABID97_RS02475 0.63 -0.2 502,136 + ABID97_RS02475 0.63 +0.2 502,136 + ABID97_RS02475 0.63 -0.4 502,137 - ABID97_RS02475 0.63 +0.2 502,137 - ABID97_RS02475 0.63 -0.4 502,140 + ABID97_RS02475 0.63 +0.4 502,140 + ABID97_RS02475 0.63 -0.1 502,140 + ABID97_RS02475 0.63 -0.2 502,141 - ABID97_RS02475 0.63 -0.3 502,141 - ABID97_RS02475 0.63 -0.1 502,141 - ABID97_RS02475 0.63 +0.5 502,294 - ABID97_RS02475 0.66 -0.5 503,055 + ABID97_RS02475 0.79 -0.1 503,055 + ABID97_RS02475 0.79 -0.2 503,056 - ABID97_RS02475 0.79 -0.3 503,605 - ABID97_RS02475 0.88 +0.0 503,757 + +0.1 503,757 + -0.2 503,757 + +0.7 503,758 - +0.3 503,817 + -0.6 503,817 + +1.5 503,817 + +0.2 503,817 + +0.2 503,817 + -0.2 503,818 - -0.0 503,818 - -0.0 504,447 + +0.0 504,596 + -0.8 504,788 + ABID97_RS02480 0.34 +0.5 504,788 + ABID97_RS02480 0.34 -1.6 504,789 - ABID97_RS02480 0.34 -0.2 504,789 - ABID97_RS02480 0.34 -0.2 504,789 - ABID97_RS02480 0.34 +0.9 504,794 + ABID97_RS02480 0.35 +2.2 504,794 + ABID97_RS02480 0.35 +2.3 504,795 - ABID97_RS02480 0.35 +0.0 504,795 - ABID97_RS02480 0.35 -0.1 504,795 - ABID97_RS02480 0.35 +0.6 505,056 - ABID97_RS02480 0.87 -0.1
Or see this region's nucleotide sequence